Bug 220729 - math/gretl: Fix R dependency option (causing build failure)
Summary: math/gretl: Fix R dependency option (causing build failure)
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: amd64 Any
: --- Affects Some People
Assignee: freebsd-ports-bugs (Nobody)
URL:
Keywords: easy, needs-qa
Depends on:
Blocks:
 
Reported: 2017-07-14 09:59 UTC by Beeblebrox
Modified: 2017-08-18 17:30 UTC (History)
1 user (show)

See Also:
koobs: merge-quarterly?

Attachments
math/gretl: patch-Fix R dependency option (261 bytes, patch)
2017-07-14 11:13 UTC, Beeblebrox 		koobs: maintainer-approval+
Details | Diff
View All Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.
Description Beeblebrox 2017-07-14 09:59:59 UTC 
math/gretl currently enabling option R=yes causes compile error with

"gretl-1.9.13_10 depends on shared library: libR.so - not found
*** Error code 1"

Use R-CRAN syntax to fix this:
-@66  R_LIB_DEPENDS=      libR.so:math/R  
+@66  R_LIB_DEPENDS=      ${CRAN_DEPENDS}

Builds as expected on 12-Current-amd64
Comment 1 Kubilay Kocak freebsd_committer freebsd_triage 2017-07-14 10:07:46 UTC 
Thank you Beeblebrox. Could you include the patch in comment 0 as an attachment please
Comment 2 Beeblebrox 2017-07-14 11:13:21 UTC 
Created attachment 184343 [details]
math/gretl: patch-Fix R dependency option

comment #0
Comment 3 Kubilay Kocak freebsd_committer freebsd_triage 2017-07-14 11:54:14 UTC 
Comment on attachment 184343 [details]
math/gretl: patch-Fix R dependency option

Port is unmaintained, implicit approval pending QA
Comment 4 Beeblebrox 2017-07-15 20:57:51 UTC 
math/R seems to have a new syntax from several days ago.
I confirm my patch still works, while new syntax does not
R_LIB_DEPENDS=          cran:auto-plist,compiles

It would probably be better to consult the R port maintainers in any case.

On a separate but related topic:
I'm seeing R-Cran build failures as
"unable to load shared object '/usr/local/lib/R/library/stats/libs/stats.so':
  Shared object "libRlapack.so" not found, required by "stats.so"

My R port is built with option OPENBLAS & not RBLAS, which places lapack.so under /usr/local/lib/R/modules/

I think Mk/Uses/cran.mk is the problem with
@24: R_LIB_DIR=      lib/R/library
Where it should have an IF or other library path resolution method to check R/modules.
Comment 5 commit-hook freebsd_committer freebsd_triage 2017-08-18 17:25:22 UTC 
A commit references this bug:

Author: swills
Date: Fri Aug 18 17:25:14 UTC 2017
New revision: 448261
URL: https://svnweb.freebsd.org/changeset/ports/448261

Log:
  math/gretl: Fix R dependency option (causing build failure)

  PR:		220729
  Submitted by:	Beeblebrox <zaphod@berentweb.com>

Changes:
  head/math/gretl/Makefile
Comment 6 Steve Wills freebsd_committer freebsd_triage 2017-08-18 17:30:06 UTC 
Committed, thanks!