Created attachment 208452 [details] v1 Hi there I would like to ask for an exp-run to upgrade math/gsl to 2.6 The following ports have been marked broken: - biology/gemma: there is a conflict between cblas headers included in gsl and math/cblas - math/p5-Math-GSL: does not have support for gsl-2.6 (no upstream activity). The patch is attached, and can also be found here: https://people.freebsd.org/~tcberner/patches/gsl-2.6.v1.diff mfg Tobias
Exp-run seems fine.
A commit references this bug: Author: tcberner Date: Fri Oct 25 23:41:47 UTC 2019 New revision: 515671 URL: https://svnweb.freebsd.org/changeset/ports/515671 Log: math/gsl: update to 2.6 - math/p5-Math-GSL does not seem to have any upstream activity to make it work with this version -> mark it broken - this also breaks the two consumers of this port - biology/gemma: has a conflict with cblas, and is makred broken. PR: 241363 Exp-run by: antoine Changes: head/astro/gnuastro/Makefile head/astro/siril/Makefile head/audio/p5-Audio/Makefile head/audio/snd/Makefile head/benchmarks/flowgrind/Makefile head/biology/bcftools/Makefile head/biology/gemma/Makefile head/biology/viennarna/Makefile head/comms/gnuradio/Makefile head/editors/calligra/Makefile head/graphics/enblend/Makefile head/graphics/inkscape/Makefile head/graphics/krita/Makefile head/graphics/luminance-qt5/Makefile head/graphics/mandelbulber/Makefile head/graphics/nip2/Makefile head/graphics/pfstools/Makefile head/graphics/qgis/Makefile head/graphics/qgis-ltr/Makefile head/graphics/xaos/Makefile head/lang/algol68g/Makefile head/mail/bogofilter/Makefile head/mail/bogofilter-kc/Makefile head/mail/bogofilter-lmdb/Makefile head/mail/bogofilter-sqlite/Makefile head/mail/bogofilter-tc/Makefile head/math/asymptote/Makefile head/math/deal.ii/Makefile head/math/dieharder/Makefile head/math/fflas-ffpack/Makefile head/math/giacxcas/Makefile head/math/gsl/Makefile head/math/gsl/distinfo head/math/gsl/pkg-plist head/math/labplot/Makefile head/math/mandelbulber2/Makefile head/math/mathgl/Makefile head/math/mcsim/Makefile head/math/ocamlgsl/Makefile head/math/octave-forge-gsl/Makefile head/math/orpie/Makefile head/math/p5-Algorithm-KMeans/Makefile head/math/p5-Math-GSL/Makefile head/math/pspp/Makefile head/math/py-cvxopt/Makefile head/math/py-pygsl/Makefile head/math/py-pygslodeiv2/Makefile head/math/rubygem-rb-gsl/Makefile head/misc/visp/Makefile head/science/afni/Makefile head/science/antioch/Makefile head/science/coot/Makefile head/science/erkale/Makefile head/science/fisicalab/Makefile head/science/getdp/Makefile head/science/gnudatalanguage/Makefile head/science/jdftx/Makefile head/science/kst2/Makefile head/science/meep/Makefile head/science/nest/Makefile head/science/octopus/Makefile head/science/py-mlpy/Makefile head/science/scidavis/Makefile head/science/step/Makefile
Thanks for the exp-run.