Bug 89497 - New port: biology/p5-bioperl-devel A collection of Perl modules for bioinformatics (developer release)
Summary: New port: biology/p5-bioperl-devel A collection of Perl modules for bioinform...
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Simon Barner
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2005-11-24 16:30 UTC by Mauricio Herrera Cuadra
Modified: 2005-12-02 21:41 UTC (History)
0 users

See Also:

Attachments
file.shar (121.19 KB, text/plain)
2005-11-24 16:30 UTC, Mauricio Herrera Cuadra 		no flags Details
View All Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.
Description Mauricio Herrera Cuadra 2005-11-24 16:30:02 UTC 
              This port installs the developer release (1.5.1) of the BioPerl software.

The MAN3 pages were not listed in the Makefile because of the large amount of new modules incorporated into the suite. Listing them in the Makefile produced an install error due to shell limitations (e.g. /bin/sh:Argument list too long), so putting them into pkg-plist was a necessary workaround. I've tested the port thoroughly and it works fine (install, deinstall, pkg_create, reinstall, etc.).
Comment 1 Simon Barner freebsd_committer freebsd_triage 2005-11-28 18:13:07 UTC 
State Changed
From-To: open->repocopy

Needs repo-copy from biology/p5-bioperl
Comment 2 Simon Barner freebsd_committer freebsd_triage 2005-11-28 18:15:27 UTC 
Responsible Changed
From-To: freebsd-ports-bugs->portmgr

Over to portmgr for repo-copy.
Comment 3 Joe Marcus Clarke freebsd_committer freebsd_triage 2005-11-30 05:47:29 UTC 
State Changed
From-To: repocopy->open

biology/p5-bioperl-devel already exists.  Just revive the port from the Attic.
Comment 4 Joe Marcus Clarke freebsd_committer freebsd_triage 2005-11-30 05:47:29 UTC 
Responsible Changed
From-To: portmgr->barner

biology/p5-bioperl-devel already exists.  Just revive the port from the Attic.
Comment 5 Simon Barner freebsd_committer freebsd_triage 2005-11-30 13:17:18 UTC 
State Changed
From-To: open->feedback

Ask submitter to review modified port (in private mail).
Comment 6 Simon Barner freebsd_committer freebsd_triage 2005-12-02 21:41:39 UTC 
State Changed
From-To: feedback->closed

Committed, with minor changes. Thanks!