The current afni port has a serious flaw that will cause plugins to be unusable unless PREFIX is altered, so that the plugins are installed in their own directory. AFNI assumes that all .so files in the directory pointed to by AFNI_PLUGINPATH are plugins. Hence, most users, who simply run "make install", will find AFNI unusable when installed from the port. This update corrects the problem by installing plugins into ${PREFIX}/lib/afni instead of ${PREFIX}/lib. It also updates the AFNI version, and contains a number of other enhancements. diff -ruN afni.old/Makefile Ports/science/afni/Makefile --- afni.old/Makefile Thu Jul 6 16:57:06 2006 +++ Ports/science/afni/Makefile Sat Sep 16 21:57:16 2006 @@ -3,7 +3,7 @@ # Date created: 11 Jan 2005 # Whom: bacon@smithers.neuro.mcw.edu # -# $FreeBSD: ports/science/afni/Makefile,v 1.7 2006/07/06 21:57:06 linimon Exp $ +# $FreeBSD: ports/science/afni/Makefile,v 1.4 2006/02/13 10:24:18 vd Exp $ # ############################################################################ @@ -16,14 +16,14 @@ # Makefile.BSD, which is included in the source distribution. PORTNAME= afni -PORTVERSION= 2006.03.21.1314 +PORTVERSION= 2006.06.30.1332 CATEGORIES= science biology graphics -MASTER_SITES= http://afni.nimh.nih.gov/pub/dist/tgz/ \ - http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/ -DISTFILES= afni_src.tgz afni_doc.tgz afni.1 Makefile.FreeBSD_PORT \ - TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3b-Mar1506.tgz +MASTER_SITES= http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/ \ + http://afni.nimh.nih.gov/pub/dist/tgz/ +DISTFILES= afni_src.tgz afni_doc.tgz afni.1 \ + TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3c-May0806.tgz DIST_SUBDIR= AFNI-${PORTVERSION} -EXTRACT_ONLY= afni_src.tgz afni_doc.tgz CA_EZ_v1.3b-Mar1506.tgz +EXTRACT_ONLY= afni_src.tgz afni_doc.tgz CA_EZ_v1.3c-May0806.tgz MAINTAINER= bacon@smithers.neuro.mcw.edu COMMENT= Advanced Functional Neuro Imaging @@ -36,7 +36,7 @@ .include <bsd.port.pre.mk> .if ${ARCH} == "sparc64" -BROKEN= Does not compile on sparc64: "undefined reference to '_mcount'" +BROKEN= Does not compile on sparc64: "undefined reference to `_mcount'" .endif USE_GETTEXT= yes @@ -49,8 +49,6 @@ MAKEFILE= Makefile.FreeBSD_PORT ALL_TARGET= vastness suma -SUB_FILES= pkg-message - ########################################################################### # Install parameters @@ -66,6 +64,7 @@ @Center_Distance \ @CheckForAfniDset \ @CommandGlobb \ + @DoPerRoi.py \ @DTI_studio_reposition \ @FromRAI \ @GetAfniOrient \ @@ -76,6 +75,7 @@ @Purify_1D \ @RenamePanga \ @SUMA_AlignToExperiment \ + @SUMA_Make_Spec_Caret \ @SUMA_Make_Spec_FS \ @SUMA_Make_Spec_SF \ @ToRAI \ @@ -90,6 +90,7 @@ @np \ @parse_afni_name \ @parse_name \ + afni_base.py \ 3dMax \ suma_change_spec @@ -99,15 +100,18 @@ INSTALL_TEMP= ${WRKSRC}/Backup.BSD post-extract: - ${CP} -f ${DISTDIR}/${DIST_SUBDIR}/Makefile.FreeBSD_PORT ${WRKSRC} + ${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC} + ${CP} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${WRKDIR} + ${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${WRKDIR}/afni.1 do-install: - ${MKDIR} ${DATADIR} ${INSTALL_TEMP} + ${MKDIR} ${DATADIR} ${INSTALL_TEMP} \ + ${PREFIX}/lib/afni ${PREFIX}/include/afni @${MV} ${INSTALL_WRKSRC}/libf2c.a ${INSTALL_TEMP} ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.so ${INSTALL_WRKSRC}/*.a \ - ${PREFIX}/lib + ${PREFIX}/lib/afni ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.h \ - ${PREFIX}/include + ${PREFIX}/include/afni ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.jpg ${INSTALL_WRKSRC}/*.txt \ ${DATADIR} @${MV} ${INSTALL_WRKSRC}/*.so \ @@ -126,8 +130,8 @@ .endfor ${INSTALL_PROGRAM} ${INSTALL_WRKSRC}/* ${PREFIX}/bin ${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/TTatlas* ${DATADIR} - ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3b-Mar1506/* ${DATADIR} - ${INSTALL_MAN} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${PREFIX}/man/man1 + ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3c-May0806/* ${DATADIR} + ${INSTALL_MAN} ${WRKDIR}/afni.1 ${PREFIX}/man/man1 @${MV} ${INSTALL_TEMP}/* ${INSTALL_WRKSRC} .if !defined(NOPORTDOCS) ${MKDIR} ${DOCSDIR} @@ -135,6 +139,6 @@ .endif post-install: - @${CAT} ${WRKDIR}/pkg-message + @${CAT} pkg-message .include <bsd.port.post.mk> diff -ruN afni.old/distinfo Ports/science/afni/distinfo --- afni.old/distinfo Thu May 25 09:23:50 2006 +++ Ports/science/afni/distinfo Sat Sep 16 08:21:24 2006 @@ -1,21 +1,18 @@ -MD5 (AFNI-2006.03.21.1314/afni_src.tgz) = 4b66b4951788c36b137d46dc3dcac4bb -SHA256 (AFNI-2006.03.21.1314/afni_src.tgz) = 688140a767196086a6db522f1b88f2b8d19cf72648ef689a5f74dc4c3975b610 -SIZE (AFNI-2006.03.21.1314/afni_src.tgz) = 10856284 -MD5 (AFNI-2006.03.21.1314/afni_doc.tgz) = 3b085de85fc46908652ae287d1cceb38 -SHA256 (AFNI-2006.03.21.1314/afni_doc.tgz) = 28bfcb085d97f63a7e6b753d784908d7f90d9d3ba735d96b18c1e893af4d6cd1 -SIZE (AFNI-2006.03.21.1314/afni_doc.tgz) = 3267095 -MD5 (AFNI-2006.03.21.1314/afni.1) = 39c9a1a39b207cd957f0f0d5ec220e4e -SHA256 (AFNI-2006.03.21.1314/afni.1) = f14991934a8b78f2497cd1d0f48b849c1a6debef01c666eafd70993ba63c99da -SIZE (AFNI-2006.03.21.1314/afni.1) = 1103 -MD5 (AFNI-2006.03.21.1314/Makefile.FreeBSD_PORT) = 77fd9306b8e5c73c555edcf04aeaf562 -SHA256 (AFNI-2006.03.21.1314/Makefile.FreeBSD_PORT) = f29118dbe49cc95de62a6b3ca2b31cfae0017247854d764dc5e0069ed58f589b -SIZE (AFNI-2006.03.21.1314/Makefile.FreeBSD_PORT) = 3101 -MD5 (AFNI-2006.03.21.1314/TTatlas+tlrc.BRIK.gz) = f5a107b049bc426af5342565f4e5beee -SHA256 (AFNI-2006.03.21.1314/TTatlas+tlrc.BRIK.gz) = 0b5b087006e07e05c5f0c8306acaade955924f744457cec0c00844cc2e9e67cd -SIZE (AFNI-2006.03.21.1314/TTatlas+tlrc.BRIK.gz) = 159912 -MD5 (AFNI-2006.03.21.1314/TTatlas+tlrc.HEAD) = a0ca787a2996d7e66548176808503ac5 -SHA256 (AFNI-2006.03.21.1314/TTatlas+tlrc.HEAD) = 51c3fb158990616f355fea56886fc7c85d80ac96779f5a65a8f69207c2a85919 -SIZE (AFNI-2006.03.21.1314/TTatlas+tlrc.HEAD) = 1750 -MD5 (AFNI-2006.03.21.1314/CA_EZ_v1.3b-Mar1506.tgz) = a66e4abb3385878a945351e761d12723 -SHA256 (AFNI-2006.03.21.1314/CA_EZ_v1.3b-Mar1506.tgz) = c9e884370a1580b1101c01f44cc76f81fc0fd64af7796b76762091ee9de4feed -SIZE (AFNI-2006.03.21.1314/CA_EZ_v1.3b-Mar1506.tgz) = 2645818 +MD5 (AFNI-2006.06.30.1332/afni_src.tgz) = 3b496d379b62c57e2d27a1554da5cf29 +SHA256 (AFNI-2006.06.30.1332/afni_src.tgz) = f249e0b8f89a9bae4751d10785acc9e9b71ae179b42853a6c2b1977a9c363c98 +SIZE (AFNI-2006.06.30.1332/afni_src.tgz) = 11178437 +MD5 (AFNI-2006.06.30.1332/afni_doc.tgz) = 3b085de85fc46908652ae287d1cceb38 +SHA256 (AFNI-2006.06.30.1332/afni_doc.tgz) = 28bfcb085d97f63a7e6b753d784908d7f90d9d3ba735d96b18c1e893af4d6cd1 +SIZE (AFNI-2006.06.30.1332/afni_doc.tgz) = 3267095 +MD5 (AFNI-2006.06.30.1332/afni.1) = 7678276880116dcab3324dbf43d0ebf6 +SHA256 (AFNI-2006.06.30.1332/afni.1) = 5598ef2f409797c463bc90d0db44c283357dde9fdaebb943ded70ac8c0aa11c3 +SIZE (AFNI-2006.06.30.1332/afni.1) = 1702 +MD5 (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = f5a107b049bc426af5342565f4e5beee +SHA256 (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = 0b5b087006e07e05c5f0c8306acaade955924f744457cec0c00844cc2e9e67cd +SIZE (AFNI-2006.06.30.1332/TTatlas+tlrc.BRIK.gz) = 159912 +MD5 (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = a0ca787a2996d7e66548176808503ac5 +SHA256 (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = 51c3fb158990616f355fea56886fc7c85d80ac96779f5a65a8f69207c2a85919 +SIZE (AFNI-2006.06.30.1332/TTatlas+tlrc.HEAD) = 1750 +MD5 (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = dbb2caab5c030c505b306e1526d19150 +SHA256 (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = b4e9a6bbb2324c01f70d50e911793e637373040c8cca8e5f17882a146396bc31 +SIZE (AFNI-2006.06.30.1332/CA_EZ_v1.3c-May0806.tgz) = 2652278 diff -ruN afni.old/files/Makefile.FreeBSD_PORT Ports/science/afni/files/Makefile.FreeBSD_PORT --- afni.old/files/Makefile.FreeBSD_PORT Wed Dec 31 18:00:00 1969 +++ Ports/science/afni/files/Makefile.FreeBSD_PORT Thu May 4 10:40:22 2006 @@ -0,0 +1,108 @@ +################################################################## +# +# This Makefile is tested with FreeBSD 5.x +# +# Contributed by: +# Jason W. Bacon +# Medical College of Wisconsin +# bacon@smithers.neuro.mcw.edu +# +# Before compiling afni, install the following packages: +# +# open-motif +# +# To compile SUMA you will also need the following packages: +# +# libiconv +# gettext +# gmake +# +# Note: SUMA has display problems on FreeBSD 4.8 and below that I +# have not found time to resolve. I believe they are related +# to the version of the GL libraries that ship with 4.x. +# +# SUMA works fine under FreeBSD 4.9 with GeForce drivers installed +# and under FreeBSD 5.1. +# +# Note: The SUMA build process (as of Aug, 2003) requires GNU make, +# which is /usr/local/bin/gmake on BSD systems. +# Be sure the MAKE macro below is set to gmake. +# +# Note: Compilation of netcdf-3.5.0 may fail due to m4's lack of +# support for the -B option. Remove the -B10000 flag from +# netcdf-3.5.0/src/configure BEFORE running make to avoid +# this error. ( Or force configure to use gm4 by reversing +# the order of "m4 gm4" to "gm4 m4" everywhere in the script } +# This problem has been reported to the netcdf development team. +# It seems to have been resolved as of the June, 2003 afni +# source distribution. +# + +USE_ZLIB = -DHAVE_ZLIB +LZLIB = -lz + +CC? = cc +LD? = ${CC} + +CCDEBS = -DAFNI_DEBUG -DIMSEQ_DEBUG -DDISPLAY_DEBUG -DTHD_DEBUG +CEXTRA = -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE +ifeq (${ARCH}, amd64) +CEXTRA += -DPIC -fPIC +endif +ifeq (${ARCH}, ia64) +CEXTRA += -DPIC -fPIC +endif + +CFLAGS += ${CEXTRA} +CC += ${CFLAGS} + +CCVOL = ${CC} +CCFAST = ${CC} -O3 +CCMIN = ${CC} +CCD = ${CC} ${CCDEBS} +CCSVD = ${CC} -O0 + +IFLAGS = -I. -I/usr/X11R6/include -I/usr/local/include +LFLAGS = -s -L. -L/usr/X11R6/lib + +MAKE = gmake + +PLUGIN_SUFFIX = so +PLUGIN_LFLAGS = -shared +PLUGIN_CC = ${CC} +PLFLAGS = -s -rdynamic -L. -L/usr/X11R6/lib + +AR = /usr/bin/ar +RANLIB = /usr/bin/ranlib +TAR = /usr/bin/tar +MKDIR = /bin/mkdir +TAPE = /dev/sa0 +GZIP = /bin/gzip + +RM = /bin/rm -f +MV = /bin/mv -f +CP = /bin/cp -f + +LINT = /usr/bin/lint -a -b -u -v -x ${IFLAGS} ${CCDEFS} + +INSTALLDIR = ./BSD +LIBDIR = ${INSTALLDIR} + +# for dynamic linking + +LLIBS = -lmri -lXm -lXp -lXpm -lXext -lXmu -lXt -lX11 -lm $(LZLIB) + +# vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv +# For suma (NO STATIC LINKING OF GL libs) +SUMA_INCLUDE_PATH = -I/usr/X11R6/include -I/usr/local/include -I./ -I../ -I../niml/ -Igts/src +SUMA_LINK_PATH = -L/usr/lib -L/usr/X11R6/lib -L../ +#use -lGLw if you have libGLw.a or libGLw.so* or +# -lMesaGLw if you have Mesa's version (libMesaGLw*) of libGLw +SUMA_LINK_LIB = -lXm -lGLw -lGLU -lGL -lXmu -lXp -lXt -lXext -lX11 -lm $(LZLIB) +SUMA_MAKEFILE_NAME = SUMA_Makefile +SUMA_BIN_ARCHIVE = SUMA_FreeBSD.tar +# ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ + +############################################################### + +include Makefile.INCLUDE diff -ruN afni.old/files/pkg-message.in Ports/science/afni/files/pkg-message.in --- afni.old/files/pkg-message.in Wed Jan 25 11:34:35 2006 +++ Ports/science/afni/files/pkg-message.in Wed Dec 31 18:00:00 1969 @@ -1,7 +0,0 @@ -============================================================================= - -The environment variable AFNI_PLUGIN_PATH must contain -%%PREFIX%%/lib:%%PREFIX%%/share/afni -in order to run AFNI plugins and view splash images. - -============================================================================= diff -ruN afni.old/pkg-descr Ports/science/afni/pkg-descr --- afni.old/pkg-descr Wed Jan 25 11:34:35 2006 +++ Ports/science/afni/pkg-descr Fri Jun 9 14:29:43 2006 @@ -1,4 +1,4 @@ -This is a port of AFNI, Advanced Functional Neuro Imaging. AFNI is +This is a port of AFNI, Analysis of Functional Neuro Imaging. AFNI is a tool for analyzing 3 dimensional images, especially functional MRI images used in brain mapping research. diff -ruN afni.old/pkg-message Ports/science/afni/pkg-message --- afni.old/pkg-message Wed Dec 31 18:00:00 1969 +++ Ports/science/afni/pkg-message Sat Sep 16 21:54:02 2006 @@ -0,0 +1,12 @@ +============================================================================= +Run "man afni" for information on setting up your afni environment. + +For questions or comments regarding the FreeBSD port, please contact the +port maintainer: + +bacon@smithers.neuro.mcw.edu + +For AFNI configuration and usage, please visit the AFNI WEB site at + +http://afni.nimh.nih.gov. +============================================================================= diff -ruN afni.old/pkg-plist Ports/science/afni/pkg-plist --- afni.old/pkg-plist Thu May 25 09:23:50 2006 +++ Ports/science/afni/pkg-plist Sun Sep 10 12:07:24 2006 @@ -125,6 +125,7 @@ bin/3dvolreg bin/4swap bin/AlphaSim +bin/AnalyzeTrace bin/CompareSurfaces bin/ConvertDset bin/ConvertSurface @@ -148,6 +149,7 @@ bin/SampBias bin/ScaleToMap bin/SurfClust +bin/SurfDsetInfo bin/SurfMeasures bin/SurfPatch bin/SurfQual @@ -195,7 +197,6 @@ bin/myget bin/nicat bin/nifti1_test -bin/nifti_stats bin/nifti_tool bin/nsize bin/p2t @@ -218,100 +219,101 @@ bin/to3d bin/waver bin/whereami -include/3ddata.h -include/afni_environ.h -include/afni_warp.h -include/cdflib.h -include/coxplot.h -include/cs.h -include/cs_sort_template.h -include/editvol.h -include/eispack.h -include/f2c.h -include/killer.h -include/machdep.h -include/mcw_glob.h -include/mcw_malloc.h -include/mrilib.h -include/multivector.h -include/niml.h -include/tagset.h -include/thd_compress.h -include/thd_iochan.h -include/thd_maker.h -include/vecmat.h -include/vol2surf.h -include/volpack.h -lib/libSUMA.a -lib/libcoxplot.a -lib/libmri.a -lib/libmrix.a -lib/libvolpack.a -lib/model_beta.so -lib/model_constant.so -lib/model_convgamma.so -lib/model_convgamma2a.so -lib/model_diffexp.so -lib/model_diffusion.so -lib/model_gammavar.so -lib/model_linear.so -lib/model_michaelis_menton.so -lib/model_null.so -lib/model_quadratic.so -lib/model_sinewave_ap.so -lib/model_sinewave_apf.so -lib/model_squarewave_ap.so -lib/model_squarewave_apf.so -lib/model_trnglwave_ap.so -lib/model_trnglwave_apf.so -lib/plug_3Ddump_V2.so -lib/plug_3ddot.so -lib/plug_3ddup.so -lib/plug_4Ddump.so -lib/plug_L1fit.so -lib/plug_betafit.so -lib/plug_clust.so -lib/plug_compress.so -lib/plug_coorder.so -lib/plug_copy.so -lib/plug_crender.so -lib/plug_deconvolve.so -lib/plug_delay_V2.so -lib/plug_drawdset.so -lib/plug_edit.so -lib/plug_extract.so -lib/plug_fourier.so -lib/plug_hemisub.so -lib/plug_histog.so -lib/plug_imreg.so -lib/plug_lsqfit.so -lib/plug_maskave.so -lib/plug_maskcalc.so -lib/plug_maxima.so -lib/plug_nlfit.so -lib/plug_notes.so -lib/plug_nth_dataset.so -lib/plug_nudge.so -lib/plug_permtest.so -lib/plug_power.so -lib/plug_realtime.so -lib/plug_rename.so -lib/plug_render.so -lib/plug_reorder.so -lib/plug_retroicor.so -lib/plug_roiedit.so -lib/plug_roiplot.so -lib/plug_scatplot.so -lib/plug_second_dataset.so -lib/plug_stats.so -lib/plug_stavg.so -lib/plug_tag.so -lib/plug_threshold.so -lib/plug_ttget.so -lib/plug_vol2surf.so -lib/plug_volreg.so -lib/plug_wavelets.so -lib/plug_zeropad.so +include/afni/3ddata.h +include/afni/afni_environ.h +include/afni/afni_warp.h +include/afni/cdflib.h +include/afni/coxplot.h +include/afni/cs.h +include/afni/cs_sort_template.h +include/afni/editvol.h +include/afni/eispack.h +include/afni/f2c.h +include/afni/killer.h +include/afni/machdep.h +include/afni/mcw_glob.h +include/afni/mcw_malloc.h +include/afni/mrilib.h +include/afni/multivector.h +include/afni/niml.h +include/afni/tagset.h +include/afni/thd_compress.h +include/afni/thd_iochan.h +include/afni/thd_maker.h +include/afni/vecmat.h +include/afni/vol2surf.h +include/afni/volpack.h +lib/afni/libSUMA.a +lib/afni/libcoxplot.a +lib/afni/libmri.a +lib/afni/libmrix.a +lib/afni/libvolpack.a +lib/afni/model_beta.so +lib/afni/model_constant.so +lib/afni/model_convgamma.so +lib/afni/model_convgamma2a.so +lib/afni/model_diffexp.so +lib/afni/model_diffusion.so +lib/afni/model_gammavar.so +lib/afni/model_linear.so +lib/afni/model_linplusort.so +lib/afni/model_michaelis_menton.so +lib/afni/model_null.so +lib/afni/model_quadratic.so +lib/afni/model_sinewave_ap.so +lib/afni/model_sinewave_apf.so +lib/afni/model_squarewave_ap.so +lib/afni/model_squarewave_apf.so +lib/afni/model_trnglwave_ap.so +lib/afni/model_trnglwave_apf.so +lib/afni/plug_3Ddump_V2.so +lib/afni/plug_3ddot.so +lib/afni/plug_3ddup.so +lib/afni/plug_4Ddump.so +lib/afni/plug_L1fit.so +lib/afni/plug_betafit.so +lib/afni/plug_clust.so +lib/afni/plug_compress.so +lib/afni/plug_coorder.so +lib/afni/plug_copy.so +lib/afni/plug_crender.so +lib/afni/plug_deconvolve.so +lib/afni/plug_delay_V2.so +lib/afni/plug_drawdset.so +lib/afni/plug_edit.so +lib/afni/plug_extract.so +lib/afni/plug_fourier.so +lib/afni/plug_hemisub.so +lib/afni/plug_histog.so +lib/afni/plug_imreg.so +lib/afni/plug_lsqfit.so +lib/afni/plug_maskave.so +lib/afni/plug_maskcalc.so +lib/afni/plug_maxima.so +lib/afni/plug_nlfit.so +lib/afni/plug_notes.so +lib/afni/plug_nth_dataset.so +lib/afni/plug_nudge.so +lib/afni/plug_permtest.so +lib/afni/plug_power.so +lib/afni/plug_realtime.so +lib/afni/plug_rename.so +lib/afni/plug_render.so +lib/afni/plug_reorder.so +lib/afni/plug_retroicor.so +lib/afni/plug_roiedit.so +lib/afni/plug_roiplot.so +lib/afni/plug_scatplot.so +lib/afni/plug_second_dataset.so +lib/afni/plug_stats.so +lib/afni/plug_stavg.so +lib/afni/plug_tag.so +lib/afni/plug_threshold.so +lib/afni/plug_ttget.so +lib/afni/plug_vol2surf.so +lib/afni/plug_volreg.so +lib/afni/plug_wavelets.so +lib/afni/plug_zeropad.so %%DATADIR%%/Dist_Stamp %%DATADIR%%/Readme_dist %%DATADIR%%/TT_N27+tlrc.BRIK.gz @@ -326,6 +328,11 @@ %%DATADIR%%/TT_N27_EZ_ML+tlrc.HEAD %%DATADIR%%/TTatlas+tlrc.BRIK.gz %%DATADIR%%/TTatlas+tlrc.HEAD +%%DATADIR%%/face_erinskinner.jpg +%%DATADIR%%/face_hang_joon_jo.jpg +%%DATADIR%%/face_melissah.jpg +%%DATADIR%%/face_sumabucks.jpg +%%DATADIR%%/splash_sscc2006.jpg %%DATADIR%%/face_JimEliassen.jpg %%DATADIR%%/face_JohannaBaas.jpg %%DATADIR%%/face_SalloumJB.jpg
pav 2006-09-24 18:24:09 UTC FreeBSD ports repository Modified files: science/afni Makefile distinfo pkg-descr pkg-plist Added files: science/afni pkg-message science/afni/files Makefile.FreeBSD_PORT Removed files: science/afni/files pkg-message.in Log: - Fix plugins - Update to 2006.06.30.1332 PR: ports/103318 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer) Revision Changes Path 1.8 +20 -16 ports/science/afni/Makefile 1.6 +18 -21 ports/science/afni/distinfo 1.1 +108 -0 ports/science/afni/files/Makefile.FreeBSD_PORT (new) 1.2 +0 -7 ports/science/afni/files/pkg-message.in (dead) 1.2 +1 -1 ports/science/afni/pkg-descr 1.1 +12 -0 ports/science/afni/pkg-message (new) 1.4 +104 -95 ports/science/afni/pkg-plist _______________________________________________ cvs-all@freebsd.org mailing list http://lists.freebsd.org/mailman/listinfo/cvs-all To unsubscribe, send any mail to "cvs-all-unsubscribe@freebsd.org"
State Changed From-To: open->closed Committed, thanks!