Bug 125891 - maintainer request for port removal: biology/nab
Summary: maintainer request for port removal: biology/nab
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: freebsd-ports-bugs (Nobody)
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2008-07-23 00:30 UTC by M. L. Dodson
Modified: 2008-07-24 13:20 UTC (History)
0 users

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Description M. L. Dodson 2008-07-23 00:30:02 UTC 
I am the maintainer of the biology/nab port.  I asked that this port be
deprecated as it has been superceded by AmberTools (by the same developers as
nab).  It has been a couple of months since the port was marked deprecated, so
it should be removed.  I have the current version of AmberTools compiling from
with a port skeleton, but the AmberTools build environment is so different from
the expectations of a conformant FreeBSD port I do not think it can ever be
converted to a port.  Essentially the problem is that AmberTools expects to be
build in the final install location, and this location is hardwired thoroughout
the source after the build step.  I will be posting to the ports email list in
case someone has a suggestion that escapes me at this time.

Fix: 

remove the port
How-To-Repeat: NA
Comment 1 Pav Lucistnik freebsd_committer freebsd_triage 2008-07-24 13:16:50 UTC 
State Changed
From-To: open->closed

Port removed
Comment 2 dfilter service freebsd_committer freebsd_triage 2008-07-24 13:17:21 UTC 
pav         2008-07-24 12:17:12 UTC

  FreeBSD ports repository

  Modified files:
    biology              Makefile 
  Removed files:
    biology/nab          Makefile distinfo pkg-descr pkg-plist 
    biology/nab/files    config.h patch-Makefile patch-configure 
                         patch-reslib:conf.lib 
                         patch-src:wc_helix.nab patch-src_Makefile 
                         patch-src_cgen.c patch-src_nabgrm.y 
                         patch-suppose_Makefile pkg-message.in 
  Log:
  - Delete biology/nab port after being marked DEPRECATED for three months
  
  PR:             ports/125891
  Submitted by:   M. L. Dodson <mldodson@comcast.net> (maintainer)
  
  Revision  Changes    Path
  1.103     +0 -1      ports/biology/Makefile
  1.23      +0 -91     ports/biology/nab/Makefile (dead)
  1.12      +0 -3      ports/biology/nab/distinfo (dead)
  1.9       +0 -74     ports/biology/nab/files/config.h (dead)
  1.6       +0 -70     ports/biology/nab/files/patch-Makefile (dead)
  1.2       +0 -11     ports/biology/nab/files/patch-configure (dead)
  1.2       +0 -14     ports/biology/nab/files/patch-reslib:conf.lib (dead)
  1.2       +0 -11     ports/biology/nab/files/patch-src:wc_helix.nab (dead)
  1.4       +0 -17     ports/biology/nab/files/patch-src_Makefile (dead)
  1.2       +0 -21     ports/biology/nab/files/patch-src_cgen.c (dead)
  1.2       +0 -20     ports/biology/nab/files/patch-src_nabgrm.y (dead)
  1.2       +0 -10     ports/biology/nab/files/patch-suppose_Makefile (dead)
  1.2       +0 -8      ports/biology/nab/files/pkg-message.in (dead)
  1.8       +0 -22     ports/biology/nab/pkg-descr (dead)
  1.14      +0 -720    ports/biology/nab/pkg-plist (dead)
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