Bug 156059 - Update port: science/massxpert up to 2.4.3
Summary: Update port: science/massxpert up to 2.4.3
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Frederic Culot
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2011-03-30 14:10 UTC by Veniamin
Modified: 2011-03-31 08:00 UTC (History)
0 users

See Also:


Attachments
file.diff (1.74 KB, patch)
2011-03-30 14:10 UTC, Veniamin
no flags Details | Diff

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Description Veniamin 2011-03-30 14:10:10 UTC
New version.
 Fixed a problem with considering that the lightest isotope was necessarily the most abundant isotope. In fact this is true for the main chemical elements in biological matter, but can be not true for other chemical elements. This fix will only matter to people using chemical elements of which the most abundant isotope is not the lightest one.
 Fixed a bug that crashed the program when the user would click (on the sequence editor) left of first monomer vignette.
 Added feature: when running the mz calculations dialog from the sequence editor window, the masses are automatically set in the dialog window. 
Added ion charge proton to the formula of the z fragmentation specification. 
Rewrote the Formula's elementalComposition() so that the order of the atoms is in the CHNO->alphabetic conventional order.
Comment 1 Mark Linimon freebsd_committer freebsd_triage 2011-03-31 04:38:41 UTC
Class Changed
From-To: sw-bug->maintainer-update

Fix up category and class. 


Comment 2 Mark Linimon freebsd_committer freebsd_triage 2011-03-31 04:38:41 UTC
Responsible Changed
From-To: freebsd-bugs->freebsd-ports-bugs
Comment 3 Frederic Culot freebsd_committer freebsd_triage 2011-03-31 06:09:33 UTC
Responsible Changed
From-To: freebsd-ports-bugs->culot

I'll take it.
Comment 4 dfilter service freebsd_committer freebsd_triage 2011-03-31 07:51:46 UTC
culot       2011-03-31 06:51:37 UTC

  FreeBSD ports repository

  Modified files:
    science/massxpert    Makefile distinfo pkg-plist 
  Log:
  - Update to 2.4.3
  - LICENSE added
  
  PR:             ports/156059
  Submitted by:   Gvozdikov Veniamin <g.veniamin AT googlemail.com> (maintainer)
  
  Revision  Changes    Path
  1.3       +3 -2      ports/science/massxpert/Makefile
  1.2       +2 -3      ports/science/massxpert/distinfo
  1.3       +2 -0      ports/science/massxpert/pkg-plist
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Comment 5 Frederic Culot freebsd_committer freebsd_triage 2011-03-31 07:51:56 UTC
State Changed
From-To: open->closed

Committed. Thanks!