The h5perf program needs the libh5test.so.0 library which is not installed. It's not on the plist and the makefile intentionally does not install it. This was originally seen with pkg: ===> Registering installation for hdf5-1.6.9_1 pkg-static: (hdf5-1.6.9_1) /usr/local/bin/h5perf - shared library libh5test.so.0 not found Fix: Either don't install h5perf or the post-install target needs to install libh5test.so and libh5test.so.0. The pkg-list needs to updated for that option as well. How-To-Repeat: banshee-root# ldd /usr/local/bin/h5perf /usr/local/bin/h5perf: libh5test.so.0 => not found (0) libhdf5.so.0 => /usr/local/lib/libhdf5.so.0 (0x800815000) libz.so.3 => /usr/lib/libz.so.3 (0x800bdd000) libm.so.4 => /usr/lib/libm.so.4 (0x800df1000) libpthread.so.0 => /usr/lib/libpthread.so.0 (0x80101b000) libc.so.8 => /usr/lib/libc.so.8 (0x801232000)
Maintainer of science/hdf5, Please note that PR ports/179951 has just been submitted. If it contains a patch for an upgrade, an enhancement or a bug fix you agree on, reply to this email stating that you approve the patch and a committer will take care of it. The full text of the PR can be found at: http://www.freebsd.org/cgi/query-pr.cgi?pr=ports/179951 -- Edwin Groothuis via the GNATS Auto Assign Tool edwin@FreeBSD.org
State Changed From-To: open->feedback Awaiting maintainers feedback (via the GNATS Auto Assign Tool)
State Changed From-To: feedback->open maintainer timeout (~4 weeks)
Responsible Changed From-To: freebsd-ports-bugs->marino I'll take it.
Author: marino Date: Mon Jul 22 18:17:31 2013 New Revision: 323491 URL: http://svnweb.freebsd.org/changeset/ports/323491 Log: science/hdf5: Remove h5perf that is missing shared library The h5perf program will not run because it is linked to libh5test.so.0 which is not installed. Rather than install this shared library, a patch was added to prohibit h5perf from installing. PR: ports/179951 Approved by: bapt (mentor), maintainer timeout (~4 weeks) Added: head/science/hdf5/files/patch-Makefile.in (contents, props changed) Modified: head/science/hdf5/Makefile head/science/hdf5/pkg-plist Modified: head/science/hdf5/Makefile ============================================================================== --- head/science/hdf5/Makefile Mon Jul 22 18:15:40 2013 (r323490) +++ head/science/hdf5/Makefile Mon Jul 22 18:17:31 2013 (r323491) @@ -1,14 +1,9 @@ -# ex:ts=8 -# New ports collection makefile for: HDF5 -# Date created: Jul 7, 2002 -# Whom: ijliao -# +# Created by: ijliao # $FreeBSD$ -# PORTNAME= hdf5 PORTVERSION= 1.6.9 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science archivers graphics MASTER_SITES= ftp://ftp.hdfgroup.org/HDF5/current16/src/ \ ftp://ftp.hdfgroup.org/HDF5/prev-releases/ \ Added: head/science/hdf5/files/patch-Makefile.in ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/hdf5/files/patch-Makefile.in Mon Jul 22 18:17:31 2013 (r323491) @@ -0,0 +1,11 @@ +--- Makefile.in.orig 2009-05-01 02:23:03.000000000 +0000 ++++ Makefile.in +@@ -93,7 +93,7 @@ uninstall-all: + @$(MAKE) uninstall-doc + + install: +- @@SETX@; for d in $(SUBDIRS) perform; do \ ++ @@SETX@; for d in $(SUBDIRS); do \ + (cd $$d && $(MAKE) $@) || exit 1; \ + done + @$(MAKE) install-examples Modified: head/science/hdf5/pkg-plist ============================================================================== --- head/science/hdf5/pkg-plist Mon Jul 22 18:15:40 2013 (r323490) +++ head/science/hdf5/pkg-plist Mon Jul 22 18:17:31 2013 (r323491) @@ -9,7 +9,6 @@ bin/h5dump bin/h5import bin/h5jam bin/h5ls -bin/h5perf bin/h5redeploy bin/h5repack bin/h5repart _______________________________________________ svn-ports-all@freebsd.org mailing list http://lists.freebsd.org/mailman/listinfo/svn-ports-all To unsubscribe, send any mail to "svn-ports-all-unsubscribe@freebsd.org"
State Changed From-To: open->closed Committed. Thanks!