Created attachment 190394 [details] patch to the ports tree The attached patch updates math/dynare to the latest release 4.5.4. It also fixes a minor portlint warning. From the announcement: This release is compatible with MATLAB versions 7.5 (R2007b) to 9.3 (R2017b) and with GNU Octave versions 4.2. Here is a list of the problems identified in version 4.5.3 and that have been fixed in version 4.5.4: - The `type` option of `plot_shock_decomposition` was always set to `qoq` regardless of what is specified. - Bug in GSA when no parameter was detected below pvalue threshold. - Various bug fixes in shock decompositions. - Bug in reading in macro arrays passed on `dynare` command line via the `-D` option. - Estimation with missing values was crashing if the `prefilter` option was used. - Added a workaround for a difference in behaviour between Octave and Matlab regarding the creation of function handles for functions that do not exist in the path. With Octave 4.2.1, steady state files did not work if no auxiliary variables were created. - The `stoch_simul` command was crashing with a cryptic message if option `order=3` was used without setting `k_order_solver`. - In cases where the prior bounds are infinite and the mode is estimated at exactly 0, no `mode_check` graphs were displayed. - Parallel execution of MCMC was broken in models without auxiliary variables. - Reading data with column names from Excel might crash. - The multivariate Kalman smoother was crashing in case of missing data in the observations and `Finf` became singular. - The `plot_shock_decomposition` command ignored various user-defined options like `fig_name`, `use_shock_groups` or `interactive` and instead used the default options. - Nested `@#ifdef` and `@#ifndef` statements don't work in the macroprocessor. Q/A - portlint -AC: OK - poudriere builds from {10.3,10.4,11.1}{amd64,i386}: OK - Logs can be found at: https://www.dropbox.com/sh/6itvsf7xackqliw/AAAgGn-BKKOnXFn-Y8QpKHWra?dl=0
Committed, thanks!
A commit references this bug: Author: yuri Date: Sat Feb 10 18:01:21 UTC 2018 New revision: 461410 URL: https://svnweb.freebsd.org/changeset/ports/461410 Log: math/dynare: Update to 4.5.4 Fix error in documentation of presample in realtime shock decomposition. PR: 225736 Submitted by: fernando.apesteguia@gmail.com (maintainer) Approved by: tcberner (mentor, implicit) Changes: head/math/dynare/Makefile head/math/dynare/distinfo