Bug 228908 - biology/htslib: Update 1.8
Summary: biology/htslib: Update 1.8
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: --- Affects Only Me
Assignee: Yuri Victorovich
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-06-12 01:19 UTC by Yuri Victorovich
Modified: 2018-07-16 18:12 UTC (History)
2 users (show)

See Also:
bugzilla: maintainer-feedback? (cartwright)

Attachments
patch (1.89 KB, patch)
2018-06-12 01:19 UTC, Yuri Victorovich 		no flags Details | Diff
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Description Yuri Victorovich freebsd_committer freebsd_triage 2018-06-12 01:19:20 UTC 
Created attachment 194182 [details]
patch
Comment 1 cartwright 2018-06-18 20:10:51 UTC 
Patch looks good. However, if samtools and bcftools should be patched as well to stay in sync with htslib.
Comment 2 Yuri Victorovich freebsd_committer freebsd_triage 2018-07-16 18:11:57 UTC 
Committed.
Comment 3 commit-hook freebsd_committer freebsd_triage 2018-07-16 18:12:09 UTC 
A commit references this bug:

Author: yuri
Date: Mon Jul 16 18:11:45 UTC 2018
New revision: 474752
URL: https://svnweb.freebsd.org/changeset/ports/474752

Log:
  biology/htslib: Update 1.6 -> 1.8

  Port changes:
  * Use DISTVERSION
  * Add USES=localbase instead of CPPFLAGS/LDFLAGS
  * Move USES=ssl to CURL_USES=ssl
  * Update WWW

  PR:		228908
  Approved by:	maintainer's timeout (cartwright@asu.edu; 35 days)

Changes:
  head/biology/htslib/Makefile
  head/biology/htslib/distinfo
  head/biology/htslib/pkg-descr
  head/biology/htslib/pkg-plist