Created attachment 254264 [details] biology/hmmer: update to 3.4 Attached patch updates the port to 3.4. Port builds fine on armv7, aarch64, i386, and amd64. Support for aarch64/armv7 is new. The test suite passes on armv7, aarch64. On i386, unit test hmmpgmd_shard_ga fails: exercise 299 [ hmmpgmd_shard_ga] ... FAILED [command failed] On amd64, two unit tests fail: exercise 297 [ hmmpgmd_ga] ... FAILED [crash!] exercise 299 [ hmmpgmd_shard_ga] ... FAILED [command failed] Dear maintainer, please review and if applicable approve of the patch by setting the "maintainer-approval" flag to + on the patch file.
I'm no longer able to reproduce the test suite failures; perhaps they are found in dependencies that have since been updated.
maintainer timeout
A commit in branch main references this bug: URL: https://cgit.FreeBSD.org/ports/commit/?id=8647447c0da92af2ceac8c4140280e64ce8f284c commit 8647447c0da92af2ceac8c4140280e64ce8f284c Author: Robert Clausecker <fuz@FreeBSD.org> AuthorDate: 2024-10-15 15:05:24 +0000 Commit: Robert Clausecker <fuz@FreeBSD.org> CommitDate: 2024-10-28 12:41:48 +0000 biology/hmmer: update to 3.4 Now builds and runs on armv7/aarch64! Changelog: http://cryptogenomicon.org/hmmer-3-4-release.html See also file RELEASE-3.4.md in distfile for an extended change log. Approved by: mzaki@e-mail.ne.jp (maintainer timeout, two weeks) PR: 282111 biology/hmmer/Makefile | 7 +++---- biology/hmmer/distinfo | 6 +++--- biology/hmmer/pkg-plist | 1 - 3 files changed, 6 insertions(+), 8 deletions(-)