Bug 278739 - biology/kallisto: Convert post-extract to EXTRACT_AFTER_ARGS
Summary: biology/kallisto: Convert post-extract to EXTRACT_AFTER_ARGS
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: --- Affects Only Me
Assignee: Jason W. Bacon
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2024-05-04 18:23 UTC by Daniel Engberg
Modified: 2024-05-05 14:56 UTC (History)
0 users

See Also:
bugzilla: maintainer-feedback? (jwb)

Attachments
Patch for kallisto (675 bytes, patch)
2024-05-04 18:23 UTC, Daniel Engberg 		no flags Details | Diff
Patch for kallisto v2 (763 bytes, patch)
2024-05-05 12:17 UTC, Daniel Engberg 		no flags Details | Diff
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Description Daniel Engberg freebsd_committer freebsd_triage 2024-05-04 18:23:49 UTC 
Created attachment 250375 [details]
Patch for kallisto

Reduces I/O as we now don't extract ext/htslib

Poudriere bulk OK
Comment 1 Daniel Engberg freebsd_committer freebsd_triage 2024-05-05 12:17:41 UTC 
Created attachment 250434 [details]
Patch for kallisto v2

Be more specific about what files to remove and preserve original flags
Comment 2 commit-hook freebsd_committer freebsd_triage 2024-05-05 14:47:47 UTC 
A commit in branch main references this bug:

URL: https://cgit.FreeBSD.org/ports/commit/?id=5d736fc85e42aac2649de640037dc54382176691

commit 5d736fc85e42aac2649de640037dc54382176691
Author:     Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2024-05-05 14:44:55 +0000
Commit:     Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2024-05-05 14:47:05 +0000

    biology/kallisto: Use EXTRACT_AFTER_ARGS to omit unused htslib dir

    Reduces I/O during builds

    PR:             278739
    Reported by:    diizzy

 biology/kallisto/Makefile | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)
Comment 3 Jason W. Bacon freebsd_committer freebsd_triage 2024-05-05 14:50:45 UTC 
Thanks!
Comment 4 Daniel Engberg freebsd_committer freebsd_triage 2024-05-05 14:52:56 UTC 
Thanks, you shouldn't need to bump PORTREVISION as binaries aren't affected.
Comment 5 Jason W. Bacon freebsd_committer freebsd_triage 2024-05-05 14:56:29 UTC 
Good point.  Not totally focused this morning...