Attachment 141156 Details for Bug 187884 – minc-2.2.00.patch

[patch] minc-2.2.00.patch

minc-2.2.00.patch (text/plain), 4.64 KB, created by Johannes Meixner on 2014-03-24 00:20:00 UTC

(hide)

Description:

Filename:

MIME Type:

Creator: Johannes Meixner

Created: 2014-03-24 00:20:00 UTC

Size: 4.64 KB

patch

obsolete

>Index: Makefile
>===================================================================
>--- Makefile	(revision 348913)
>+++ Makefile	(working copy)
>@@ -11,28 +11,31 @@
> # Of course, the netcdf port must be installed first.
> 
> PORTNAME=	minc
>-PORTVERSION=	2.0.18
>-PORTEPOCH=	1
>+PORTVERSION=	2.2.00
> CATEGORIES=	science biology
>-MASTER_SITES=	http://packages.bic.mni.mcgill.ca/tgz/ \
>-		http://www.nitrc.org/frs/download.php/801/
>-PKGNAMESUFFIX=	2
>+MASTER_SITES=	http://packages.bic.mni.mcgill.ca/tgz/
> 
> MAINTAINER=	ports@FreeBSD.org
> COMMENT=	Medical Imaging NetCDF
> 
>-LICENSE=	BSD
>+LICENSE=	MINC
>+LICENSE_NAME=	MINC License
>+LICENSE_FILE=	${WRKSRC}/COPYING
>+LICENSE_PERMS=	dist-mirror pkg-mirror auto-accept
> 
>-LIB_DEPENDS=	libnetcdf.so.4:${PORTSDIR}/science/netcdf \
>-		libhdf5.so.0:${PORTSDIR}/science/hdf5
>+LIB_DEPENDS=	libnetcdf.so:${PORTSDIR}/science/netcdf \
>+		libhdf5.so:${PORTSDIR}/science/hdf5-18
> 
>-USE_AUTOTOOLS=	libtool
> USE_LDCONFIG=	yes
>-CPPFLAGS+=	${PTHREAD_CFLAGS} -I${LOCALBASE}/include -DH5_USE_16_API
>-LDFLAGS+=	-L${LOCALBASE}/lib ${PTHREAD_LIBS}
>-CONFIGURE_ARGS=	--enable-shared=yes --enable-static=yes
>+USES=		cmake:outsource bison:build shebangfix
>+CPPFLAGS+=	${PTHREAD_CFLAGS}
>+LDFLAGS+=	${PTHREAD_LIBS}
>+CMAKE_ARGS=	-DMINC2_BUILD_SHARED_LIBS:BOOL=YES
> 
> CONFLICTS=	minc-1* zh-tk-[0-9]*
>-LATEST_LINK=	minc2
>+LATEST_LINK?=	minc2
> 
>+post-install:
>+	${CAT} ${PKGMESSAGE}
>+
> .include <bsd.port.mk>
>Index: distinfo
>===================================================================
>--- distinfo	(revision 348913)
>+++ distinfo	(working copy)
>@@ -1,2 +1,2 @@
>-SHA256 (minc-2.0.18.tar.gz) = 674cc89c43edfdb1957251c0124ea83252740c667cf3c4d9fc6183dcdb10f3e5
>-SIZE (minc-2.0.18.tar.gz) = 1628038
>+SHA256 (minc-2.2.00.tar.gz) = e689d3612db6241125e3155d5a5c109d4da6f4bd774cc00a7e6729f2a790a174
>+SIZE (minc-2.2.00.tar.gz) = 1665189
>Index: files/patch-conversion_minctoecat_machine_indep.c
>===================================================================
>--- files/patch-conversion_minctoecat_machine_indep.c	(revision 348913)
>+++ files/patch-conversion_minctoecat_machine_indep.c	(working copy)
>@@ -1,20 +0,0 @@
>---- conversion/minctoecat/machine_indep.c.orig	2007-03-29 07:08:46.000000000 +0200
>-+++ conversion/minctoecat/machine_indep.c	2014-01-28 22:55:57.000000000 +0100
>-@@ -61,7 +61,7 @@
>- }
>- 
>- #if defined(__alpha) || defined(_WIN32) /* LITTLE_ENDIAN : alpha, intel */
>--ftovaxf(f, bufr)
>-+void ftovaxf(f, bufr)
>- float f;
>- unsigned short *bufr;
>- {
>-@@ -84,7 +84,7 @@
>- 	bufr[1] =  ret >>16;
>- }
>- #else  /* BIG ENDIAN : sun hp sgi*/
>--ftovaxf(orig,number)
>-+void ftovaxf(orig,number)
>-   unsigned short number[2];
>-   float orig;
>- {
>Index: pkg-plist
>===================================================================
>--- pkg-plist	(revision 348913)
>+++ pkg-plist	(working copy)
>@@ -3,6 +3,7 @@
> bin/invert_raw_image
> bin/minc_modify_header
> bin/mincaverage
>+bin/mincblob
> bin/minccalc
> bin/mincconcat
> bin/mincconvert
>@@ -20,9 +21,11 @@
> bin/mincmakescalar
> bin/mincmakevector
> bin/mincmath
>+bin/mincmorph
> bin/mincpik
> bin/mincresample
> bin/mincreshape
>+bin/mincsample
> bin/mincstats
> bin/minctoecat
> bin/minctoraw
>@@ -33,11 +36,9 @@
> bin/rawtominc
> bin/transformtags
> bin/upet2mnc
>-bin/vff2mnc
> bin/voxeltoworld
> bin/worldtovoxel
> bin/xfmconcat
>-bin/xfmflip
> bin/xfminvert
> include/ParseArgv.h
> include/minc.h
>@@ -64,52 +65,12 @@
> include/volume_io/volume.h
> include/volume_io/volume_cache.h
> include/voxel_loop.h
>-lib/libminc2.a
>-lib/libminc2.la
>+lib/MINC2Config.cmake
>+lib/UseMINC2.cmake
> lib/libminc2.so
> lib/libminc2.so.2
>-lib/libvolume_io2.a
>-lib/libvolume_io2.la
>+lib/libminc2.so.2.2.00
> lib/libvolume_io2.so
> lib/libvolume_io2.so.2
>-man/man1/dcm2mnc.1.gz
>-man/man1/ecattominc.1.gz
>-man/man1/invert_raw_image.1.gz
>-man/man1/minc_modify_header.1.gz
>-man/man1/mincaverage.1.gz
>-man/man1/minccalc.1.gz
>-man/man1/mincconcat.1.gz
>-man/man1/mincconvert.1.gz
>-man/man1/minccopy.1.gz
>-man/man1/mincdiff.1.gz
>-man/man1/mincedit.1.gz
>-man/man1/mincexpand.1.gz
>-man/man1/mincextract.1.gz
>-man/man1/mincgen.1.gz
>-man/man1/mincheader.1.gz
>-man/man1/minchistory.1.gz
>-man/man1/mincinfo.1.gz
>-man/man1/minclookup.1.gz
>-man/man1/mincmakescalar.1.gz
>-man/man1/mincmakevector.1.gz
>-man/man1/mincmath.1.gz
>-man/man1/mincpik.1.gz
>-man/man1/mincresample.1.gz
>-man/man1/mincreshape.1.gz
>-man/man1/mincstats.1.gz
>-man/man1/minctoecat.1.gz
>-man/man1/minctoraw.1.gz
>-man/man1/mincview.1.gz
>-man/man1/mincwindow.1.gz
>-man/man1/mnc2nii.1.gz
>-man/man1/nii2mnc.1.gz
>-man/man1/rawtominc.1.gz
>-man/man1/transformtags.1.gz
>-man/man1/upet2mnc.1.gz
>-man/man1/vff2mnc.1.gz
>-man/man1/voxeltoworld.1.gz
>-man/man1/xfmconcat.1.gz
>-man/man1/xfmflip.1.gz
>-man/man1/xfminvert.1.gz
>-man/man3/ParseArgv.3.gz
>+lib/libvolume_io2.so.2.2.00
> @dirrm include/volume_io

Actions: View | Diff

Attachments on bug 187884: 141156 | 141157