FreeBSD Bugzilla – Attachment 151430 Details for
Bug 196260
[maintainer update] sysutils/slurm-hpc: Update to 14.11.2 (version scheme changed)
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[patch]
Diff to update sysutils/slurm-hpc to 14.11.2
slurm-hpc-14.11.2.diff (text/plain), 22.90 KB, created by
Joseph Mingrone
on 2015-01-06 21:52:45 UTC
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Description:
Diff to update sysutils/slurm-hpc to 14.11.2
Filename:
MIME Type:
Creator:
Joseph Mingrone
Created:
2015-01-06 21:52:45 UTC
Size:
22.90 KB
patch
obsolete
>Index: Makefile >=================================================================== >--- Makefile (revision 376442) >+++ Makefile (working copy) >@@ -2,8 +2,7 @@ > # $FreeBSD$ > > PORTNAME= slurm >-PORTVERSION= 2.6.4 >-PORTREVISION= 4 >+PORTVERSION= 14.11.2 > CATEGORIES= sysutils > MASTER_SITES= http://www.schedmd.com/download/archive/ \ > http://www.schedmd.com/download/latest/ \ >@@ -13,7 +12,7 @@ > MAINTAINER= jwbacon@tds.net > COMMENT= Simple Linux Utility for Resource Management > >-LICENSE= GPLv1 >+LICENSE= GPLv2 > > LIB_DEPENDS= libsysinfo.so:${PORTSDIR}/devel/libsysinfo \ > libhwloc.so:${PORTSDIR}/devel/hwloc \ >@@ -22,8 +21,9 @@ > libhdf5.so:${PORTSDIR}/science/hdf5 > > GNU_CONFIGURE= yes >-USES= gmake libtool perl5 python tar:bzip2 > USE_LDCONFIG= yes >+USES= gmake libtool perl5 tar:bzip2 >+USE_PYTHON= yes > > OPTIONS_DEFINE= DOCS MYSQL PGSQL GTK2 > >@@ -33,9 +33,11 @@ > USE_RC_SUBR= slurmctld slurmd > SUB_FILES+= slurm.conf > >-# This is a new and complex port. Allow debugging. >+DOCSDIR= ${PREFIX}/share/doc/${PORTNAME}-${PORTVERSION} >+PLIST_SUB= SLURM_VERSION=${PORTVERSION} >+ > STRIP_CMD= # NONE >-CFLAGS+= -I${LOCALBASE}/include -g -O1 >+CFLAGS+= -I${WRKSRC}/slurm -I${LOCALBASE}/include > LDFLAGS+= -L${LOCALBASE}/lib -lsysinfo -lkvm > > post-install: >@@ -44,7 +46,7 @@ > .include <bsd.port.options.mk> > > .if ${PORT_OPTIONS:MMYSQL} >-USE_MYSQL= yes # Job accounting >+USE_MYSQL= yes # Job accounting > PLIST_FILES+= lib/slurm/accounting_storage_mysql.a \ > lib/slurm/accounting_storage_mysql.la \ > lib/slurm/accounting_storage_mysql.so \ >@@ -57,7 +59,7 @@ > .endif > > .if ${PORT_OPTIONS:MPGSQL} >-USES+= pgsql # Job accounting >+USES+= pgsql # Job accounting > PLIST_FILES+= lib/slurm/accounting_storage_pgsql.a \ > lib/slurm/accounting_storage_pgsql.la \ > lib/slurm/accounting_storage_pgsql.so \ >@@ -73,7 +75,7 @@ > # Note: Configure could not find pcre when building with no ports > # preinstalled on 9.1-RELEASE. Worked fine on second try. > USE_GNOME= glib20 gtk20 # sview >-PLIST_FILES+= bin/sview >+#PLIST_FILES+= bin/sview > .endif > > post-patch: >Index: distinfo >=================================================================== >--- distinfo (revision 376442) >+++ distinfo (working copy) >@@ -1,2 +1,2 @@ >-SHA256 (slurm-2.6.4.tar.bz2) = f44a9a80c502dba9809127dc2a04069fd7c87d6b1e10824fe254b2077f9adac8 >-SIZE (slurm-2.6.4.tar.bz2) = 5954130 >+SHA256 (slurm-14.11.2.tar.bz2) = 92459bcee4989133ccf3fe7d3e4d1b34ce39190269f99ad007108bb3a1c11989 >+SIZE (slurm-14.11.2.tar.bz2) = 6347846 >Index: files/patch-configure >=================================================================== >--- files/patch-configure (revision 376442) >+++ files/patch-configure (working copy) >@@ -1,41 +0,0 @@ >---- configure.orig 2013-09-10 16:44:33.000000000 -0500 >-+++ configure 2013-11-14 10:23:02.000000000 -0600 >-@@ -21594,12 +21594,9 @@ >- main () >- { >- >-- int main() >-- { >- MYSQL mysql; >- (void) mysql_init(&mysql); >- (void) mysql_close(&mysql); >-- } >- >- ; >- return 0; >-@@ -21636,12 +21633,9 @@ >- main () >- { >- >-- int main() >-- { >- MYSQL mysql; >- (void) mysql_init(&mysql); >- (void) mysql_close(&mysql); >-- } >- >- ; >- return 0; >-@@ -21803,12 +21797,9 @@ >- main () >- { >- >-- int main() >-- { >- PGconn *conn; >- conn = PQconnectdb("dbname = postgres"); >- (void) PQfinish(conn); >-- } >- >- ; >- return 0; >Index: files/patch-src-plugins-select-cons_res-dist_tasks.c >=================================================================== >--- files/patch-src-plugins-select-cons_res-dist_tasks.c (revision 376442) >+++ files/patch-src-plugins-select-cons_res-dist_tasks.c (working copy) >@@ -1,68 +0,0 @@ >---- src/plugins/select/cons_res/dist_tasks.c.orig 2013-09-10 16:44:33.000000000 -0500 >-+++ src/plugins/select/cons_res/dist_tasks.c 2013-11-14 10:23:02.000000000 -0600 >-@@ -271,6 +271,30 @@ >- return SLURM_SUCCESS; >- } >- >-+// These were nested below, which is not legal in standard C >-+ >-+ /* qsort compare function for ascending int list */ >-+ int _cmp_int_ascend (const void *a, const void *b) >-+ { >-+ return (*(int*)a - *(int*)b); >-+ } >-+ >-+ /* qsort compare function for descending int list */ >-+ int _cmp_int_descend (const void *a, const void *b) >-+ { >-+ return (*(int*)b - *(int*)a); >-+ } >-+ >-+ int* sockets_cpu_cnt; >-+ >-+ /* qsort compare function for board combination socket >-+ * list */ >-+ int _cmp_sock (const void *a, const void *b) >-+ { >-+ return (sockets_cpu_cnt[*(int*)b] - >-+ sockets_cpu_cnt[*(int*)a]); >-+ } >-+ >- /* sync up core bitmap with new CPU count using a best-fit approach >- * on the available resources on each node >- * >-@@ -298,7 +322,6 @@ >- int elig_idx, comb_brd_idx, sock_list_idx, comb_min, board_num; >- int* boards_cpu_cnt; >- int* sort_brds_cpu_cnt; >-- int* sockets_cpu_cnt; >- int* board_combs; >- int* socket_list; >- int* elig_brd_combs; >-@@ -316,26 +339,6 @@ >- uint64_t ncomb_brd; >- bool sufficient,best_fit_sufficient; >- >-- /* qsort compare function for ascending int list */ >-- int _cmp_int_ascend (const void *a, const void *b) >-- { >-- return (*(int*)a - *(int*)b); >-- } >-- >-- /* qsort compare function for descending int list */ >-- int _cmp_int_descend (const void *a, const void *b) >-- { >-- return (*(int*)b - *(int*)a); >-- } >-- >-- /* qsort compare function for board combination socket >-- * list */ >-- int _cmp_sock (const void *a, const void *b) >-- { >-- return (sockets_cpu_cnt[*(int*)b] - >-- sockets_cpu_cnt[*(int*)a]); >-- } >-- >- if (!job_res) >- return; >- >Index: files/patch-src-plugins-task-cgroup-task_cgroup_cpuset.c >=================================================================== >--- files/patch-src-plugins-task-cgroup-task_cgroup_cpuset.c (revision 376442) >+++ files/patch-src-plugins-task-cgroup-task_cgroup_cpuset.c (working copy) >@@ -1,33 +0,0 @@ >---- src/plugins/task/cgroup/task_cgroup_cpuset.c.orig 2013-11-14 10:56:33.000000000 -0600 >-+++ src/plugins/task/cgroup/task_cgroup_cpuset.c 2013-11-14 11:10:51.000000000 -0600 >-@@ -59,7 +59,12 @@ >- >- #ifdef HAVE_HWLOC >- #include <hwloc.h> >-+#if !defined(__FreeBSD__) >- #include <hwloc/glibc-sched.h> >-+#else >-+// For cpuset >-+#include <pthread_np.h> >-+#endif >- >- # if HWLOC_API_VERSION <= 0x00010000 >- /* After this version the cpuset structure and all it's functions >-@@ -714,7 +719,7 @@ >- hwloc_obj_type_t req_hwtype; >- >- size_t tssize; >-- cpu_set_t ts; >-+ cpuset_t ts; >- >- bind_type = job->cpu_bind_type ; >- if (conf->task_plugin_param & CPU_BIND_VERBOSE || >-@@ -900,7 +905,7 @@ >- >- hwloc_bitmap_asprintf(&str, cpuset); >- >-- tssize = sizeof(cpu_set_t); >-+ tssize = sizeof(cpuset_t); >- if (hwloc_cpuset_to_glibc_sched_affinity(topology,cpuset, >- &ts,tssize) == 0) { >- fstatus = SLURM_SUCCESS; >Index: pkg-descr >=================================================================== >--- pkg-descr (revision 376442) >+++ pkg-descr (working copy) >@@ -1,9 +1,9 @@ >-SLURM is an open-source resource manager designed for *nix clusters of all >+Slurm is an open-source workload manager designed for *nux clusters of all > sizes. It provides three key functions. First it allocates exclusive and/or >-non-exclusive access to resources (computer nodes) to users for some duration >-of time so they can perform work. Second, it provides a framework for starting, >+non-exclusive access to resources (computer nodes) to users for some duration of >+time so they can perform work. Second, it provides a framework for starting, > executing, and monitoring work (typically a parallel job) on a set of allocated > nodes. Finally, it arbitrates contention for resources by managing a queue of > pending work. > >-WWW: https://computing.llnl.gov/linux/slurm/ >+WWW: http://slurm.schedmd.com/ >Index: pkg-plist >=================================================================== >--- pkg-plist (revision 376442) >+++ pkg-plist (working copy) >@@ -22,6 +22,7 @@ > include/slurm/slurm.h > include/slurm/slurm_errno.h > include/slurm/slurmdb.h >+include/slurm/smd_ns.h > include/slurm/spank.h > lib/libpmi.a > lib/libpmi.so >@@ -29,12 +30,12 @@ > lib/libpmi.so.0.0.0 > lib/libslurm.a > lib/libslurm.so >-lib/libslurm.so.26 >-lib/libslurm.so.26.0.0 >+lib/libslurm.so.28 >+lib/libslurm.so.28.0.0 > lib/libslurmdb.a > lib/libslurmdb.so >-lib/libslurmdb.so.26 >-lib/libslurmdb.so.26.0.0 >+lib/libslurmdb.so.28 >+lib/libslurmdb.so.28.0.0 > lib/slurm/accounting_storage_filetxt.a > lib/slurm/accounting_storage_filetxt.so > lib/slurm/accounting_storage_none.a >@@ -63,6 +64,10 @@ > lib/slurm/checkpoint_none.so > lib/slurm/checkpoint_ompi.a > lib/slurm/checkpoint_ompi.so >+lib/slurm/core_spec_cray.a >+lib/slurm/core_spec_cray.so >+lib/slurm/core_spec_none.a >+lib/slurm/core_spec_none.so > lib/slurm/crypto_munge.a > lib/slurm/crypto_munge.so > lib/slurm/crypto_openssl.a >@@ -77,10 +82,16 @@ > lib/slurm/gres_mic.so > lib/slurm/gres_nic.a > lib/slurm/gres_nic.so >+lib/slurm/job_container_cncu.a >+lib/slurm/job_container_cncu.so >+lib/slurm/job_container_none.a >+lib/slurm/job_container_none.so > lib/slurm/job_submit_all_partitions.a > lib/slurm/job_submit_all_partitions.so > lib/slurm/job_submit_cnode.a > lib/slurm/job_submit_cnode.so >+lib/slurm/job_submit_cray.a >+lib/slurm/job_submit_cray.so > lib/slurm/job_submit_defaults.a > lib/slurm/job_submit_defaults.so > lib/slurm/job_submit_logging.a >@@ -91,6 +102,8 @@ > lib/slurm/job_submit_pbs.so > lib/slurm/job_submit_require_timelimit.a > lib/slurm/job_submit_require_timelimit.so >+lib/slurm/job_submit_throttle.a >+lib/slurm/job_submit_throttle.so > lib/slurm/jobacct_gather_aix.a > lib/slurm/jobacct_gather_aix.so > lib/slurm/jobacct_gather_cgroup.a >@@ -125,6 +138,8 @@ > lib/slurm/mpi_openmpi.so > lib/slurm/mpi_pmi2.a > lib/slurm/mpi_pmi2.so >+lib/slurm/preempt_job_prio.a >+lib/slurm/preempt_job_prio.so > lib/slurm/preempt_none.a > lib/slurm/preempt_none.so > lib/slurm/preempt_partition_prio.a >@@ -141,6 +156,10 @@ > lib/slurm/proctrack_linuxproc.so > lib/slurm/proctrack_pgid.a > lib/slurm/proctrack_pgid.so >+lib/slurm/route_default.a >+lib/slurm/route_default.so >+lib/slurm/route_topology.a >+lib/slurm/route_topology.so > lib/slurm/sched_backfill.a > lib/slurm/sched_backfill.so > lib/slurm/sched_builtin.a >@@ -151,6 +170,8 @@ > lib/slurm/sched_wiki.so > lib/slurm/sched_wiki2.a > lib/slurm/sched_wiki2.so >+lib/slurm/select_alps.a >+lib/slurm/select_alps.so > lib/slurm/select_cons_res.a > lib/slurm/select_cons_res.so > lib/slurm/select_cray.a >@@ -159,14 +180,22 @@ > lib/slurm/select_linear.so > lib/slurm/select_serial.a > lib/slurm/select_serial.so >+lib/slurm/slurmctld_nonstop.a >+lib/slurm/slurmctld_nonstop.so > lib/slurm/spank_pbs.a > lib/slurm/spank_pbs.so > lib/slurm/src/sattach/sattach.wrapper.c > lib/slurm/src/srun/srun.wrapper.c >+lib/slurm/switch_cray.a >+lib/slurm/switch_cray.so >+lib/slurm/switch_generic.a >+lib/slurm/switch_generic.so > lib/slurm/switch_none.a > lib/slurm/switch_none.so > lib/slurm/task_cgroup.a > lib/slurm/task_cgroup.so >+lib/slurm/task_cray.a >+lib/slurm/task_cray.so > lib/slurm/task_none.a > lib/slurm/task_none.so > lib/slurm/topology_3d_torus.a >@@ -228,6 +257,7 @@ > man/man3/slurm_free_ctl_conf.3.gz > man/man3/slurm_free_front_end_info_msg.3.gz > man/man3/slurm_free_job_alloc_info_response_msg.3.gz >+man/man3/slurm_free_job_array_resp.3.gz > man/man3/slurm_free_job_info_msg.3.gz > man/man3/slurm_free_job_step_create_response_msg.3.gz > man/man3/slurm_free_job_step_info_response_msg.3.gz >@@ -297,7 +327,9 @@ > man/man3/slurm_read_hostfile.3.gz > man/man3/slurm_reconfigure.3.gz > man/man3/slurm_requeue.3.gz >+man/man3/slurm_requeue2.3.gz > man/man3/slurm_resume.3.gz >+man/man3/slurm_resume2.3.gz > man/man3/slurm_set_debug_level.3.gz > man/man3/slurm_set_trigger.3.gz > man/man3/slurm_shutdown.3.gz >@@ -324,11 +356,13 @@ > man/man3/slurm_strerror.3.gz > man/man3/slurm_submit_batch_job.3.gz > man/man3/slurm_suspend.3.gz >+man/man3/slurm_suspend2.3.gz > man/man3/slurm_takeover.3.gz > man/man3/slurm_terminate_job.3.gz > man/man3/slurm_terminate_job_step.3.gz > man/man3/slurm_update_front_end.3.gz > man/man3/slurm_update_job.3.gz >+man/man3/slurm_update_job2.3.gz > man/man3/slurm_update_node.3.gz > man/man3/slurm_update_partition.3.gz > man/man3/slurm_update_reservation.3.gz >@@ -339,6 +373,7 @@ > man/man5/cray.conf.5.gz > man/man5/ext_sensors.conf.5.gz > man/man5/gres.conf.5.gz >+man/man5/nonstop.conf.5.gz > man/man5/slurm.conf.5.gz > man/man5/slurmdbd.conf.5.gz > man/man5/topology.conf.5.gz >@@ -352,124 +387,135 @@ > sbin/slurmd > sbin/slurmdbd > sbin/slurmstepd >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/Slurm_Entity.pdf >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/Slurm_Individual.pdf >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/accounting.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/accounting_storageplugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/acct_gather_energy_plugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/acct_gather_profile_plugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/add.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/allocation_pies.gif >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/api.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/arch.gif >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/authplugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/big_sys.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/bluegene.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/bull.jpg >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/cgroups.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/checkpoint_blcr.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/checkpoint_plugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/coding_style.pdf >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/configurator.easy.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/configurator.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/cons_res.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/cons_res_share.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/contributor.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/cpu_management.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/cray.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/crypto_plugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/disclaimer.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/dist_plane.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/documentation.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/download.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/dynalloc.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/elastic_computing.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/entities.gif >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/example_usage.gif >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/ext_sensorsplugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/faq.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/gang_scheduling.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/gres.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/gres_design.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/gres_plugins.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/hdf5_job_outline.png >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/hdf5_profile_user_guide.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/hdf5_task_attr.png >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/help.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/high_throughput.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/ibm-pe.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/ibm.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/ibm_pe_fig1.png >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/ibm_pe_fig2.png >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/job_array.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/job_exit_code.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/job_launch.html >-%%PORTDOCS%%%%DOCSDIR%%-2.6.4/html/job_submit_plugins.html 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