Attachment 153798 Details for Bug 198292 – patch to update biology/samtools to 1.2

[patch] patch to update biology/samtools to 1.2

samtools-1.2.diff (text/plain), 1010 bytes, created by cartwright on 2015-03-04 21:04:30 UTC

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Creator: cartwright

Created: 2015-03-04 21:04:30 UTC

Size: 1010 bytes

patch

obsolete

>Index: Makefile
>===================================================================
>--- Makefile	(revision 379860)
>+++ Makefile	(working copy)
>@@ -2,7 +2,7 @@
> # $FreeBSD$
> 
> PORTNAME=	samtools
>-PORTVERSION=	1.1
>+PORTVERSION=	1.2
> CATEGORIES=	biology
> 
> MAINTAINER=	cartwright@asu.edu
>@@ -11,11 +11,12 @@
> LICENSE=	MIT
> LICENSE_FILE=	${WRKSRC}/LICENSE
> 
>+BUILD_DEPENDS=	htslib>=1.2:${PORTSDIR}/biology/htslib
> LIB_DEPENDS=	libhts.so:${PORTSDIR}/biology/htslib
> 
> USE_GITHUB=	yes
> GH_ACCOUNT=	samtools
>-GH_COMMIT=	34c6691
>+GH_COMMIT=	6af451d
> 
> USES=		gmake
> SUB_FILES=	pkg-message
>Index: distinfo
>===================================================================
>--- distinfo	(revision 379860)
>+++ distinfo	(working copy)
>@@ -1,2 +1,2 @@
>-SHA256 (samtools-1.1.tar.gz) = adf674bef85e6ffd88d19178a46f229fc033c7302610d5a51ef9709dd0346c59
>-SIZE (samtools-1.1.tar.gz) = 4321336
>+SHA256 (samtools-1.2.tar.gz) = a9f8695d2d7da23f2cbc6e34820eff9169966ed7dd52254b427e0036b16b1f23
>+SIZE (samtools-1.2.tar.gz) = 4318928

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Attachments on bug 198292: 153798 | 153846 | 153847