Attachment 163045 Details for Bug 204491 – poudriere-platon.log

poudriere-platon.log

platon-2015.03.30.log (text/plain), 12.26 KB, created by Walter Schwarzenfeld on 2015-11-12 09:50:12 UTC

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Creator: Walter Schwarzenfeld

Created: 2015-11-12 09:50:12 UTC

Size: 12.26 KB

patch

obsolete

>====>> Building biology/platon
>build started at Thu Nov 12 10:48:31 UTC 2015
>port directory: /usr/ports/biology/platon
>building for: FreeBSD 102amd64-default-job-01 10.2-RELEASE-p3 FreeBSD 10.2-RELEASE-p3 amd64
>maintained by: ports@FreeBSD.org
>Makefile ident:      $FreeBSD: head/biology/platon/Makefile 401096 2015-11-09 12:59:03Z antoine $
>Poudriere version: 3.1.9
>Host OSVERSION: 1002000
>Jail OSVERSION: 1002000
>
>---Begin Environment---
>OSVERSION=1002000
>UNAME_v=FreeBSD 10.2-RELEASE-p3
>UNAME_r=10.2-RELEASE-p3
>BLOCKSIZE=K
>MAIL=/var/mail/root
>STATUS=1
>SAVED_TERM=xterm
>MASTERMNT=/usr/local/poudriere/data/.m/102amd64-default/ref
>FORCE_PACKAGE=yes
>PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
>POUDRIERE_BUILD_TYPE=bulk
>PKGNAME=platon-2015.03.30
>OLDPWD=/
>PWD=/usr/local/poudriere/data/.m/102amd64-default/ref/.p/pool
>MASTERNAME=102amd64-default
>SCRIPTPREFIX=/usr/local/share/poudriere
>USER=root
>HOME=/root
>POUDRIERE_VERSION=3.1.9
>SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
>LIBEXECPREFIX=/usr/local/libexec/poudriere
>LOCALBASE=/usr/local
>PACKAGE_BUILDING=yes
>---End Environment---
>
>---Begin OPTIONS List---
>===> The following configuration options are available for platon-2015.03.30:
>     DOCS=on: Build and/or install documentation
>===> Use 'make config' to modify these settings
>---End OPTIONS List---
>
>--CONFIGURE_ARGS--
>
>--End CONFIGURE_ARGS--
>
>--CONFIGURE_ENV--
>F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/platon/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/platon/work  HOME=/wrkdirs/usr/ports/biology/platon/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
>--End CONFIGURE_ENV--
>
>--MAKE_ENV--
>F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/platon/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/platon/work  HOME=/wrkdirs/usr/ports/biology/platon/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  -L/usr/local/lib/gcc48 -B/usr/local/bin -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
>--End MAKE_ENV--
>
>--PLIST_SUB--
>OSREL=10.2
>PREFIX=%D
>LOCALBASE=/usr/local
>RESETPREFIX=/usr/local
>PORTDOCS=""
>PORTEXAMPLES=""
>LIB32DIR=lib
>DOCSDIR="share/doc/platon"
>EXAMPLESDIR="share/examples/platon"
>DATADIR="share/platon"
>WWWDIR="www/platon"
>ETCDIR="etc/platon"
>--End PLIST_SUB--
>
>--SUB_LIST--
>PREFIX=/usr/local
>LOCALBASE=/usr/local
>DATADIR=/usr/local/share/platon
>DOCSDIR=/usr/local/share/doc/platon
>EXAMPLESDIR=/usr/local/share/examples/platon
>WWWDIR=/usr/local/www/platon
>ETCDIR=/usr/local/etc/platon
>--End SUB_LIST--
>
>---Begin make.conf---
>USE_PACKAGE_DEPENDS=yes
>BATCH=yes
>WRKDIRPREFIX=/wrkdirs
>PORTSDIR=/usr/ports
>PACKAGES=/packages
>DISTDIR=/distfiles
>DISABLE_MAKE_JOBS=poudriere
>---End make.conf---
>=======================<phase: check-sanity   >============================
>===========================================================================
>=======================<phase: pkg-depends    >============================
>===>   platon-2015.03.30 depends on file: /usr/local/sbin/pkg - not found
>===>   Installing existing package /packages/All/pkg-1.6.1_2.txz
>[102amd64-default-job-01] Installing pkg-1.6.1_2...
>[102amd64-default-job-01] Extracting pkg-1.6.1_2: .......... done
>Message from pkg-1.6.1_2:
>If you are upgrading from the old package format, first run:
>
>  # pkg2ng
>===>   platon-2015.03.30 depends on file: /usr/local/sbin/pkg - found
>===>   Returning to build of platon-2015.03.30
>===========================================================================
>=======================<phase: fetch-depends  >============================
>===========================================================================
>=======================<phase: fetch          >============================
>===> Fetching all distfiles required by platon-2015.03.30 for building
>===========================================================================
>=======================<phase: checksum       >============================
>===> Fetching all distfiles required by platon-2015.03.30 for building
>=> SHA256 Checksum OK for platon/2015.03.30/platon.tar.gz.
>===========================================================================
>=======================<phase: extract-depends>============================
>===========================================================================
>=======================<phase: extract        >============================
>===> Fetching all distfiles required by platon-2015.03.30 for building
>===>  Extracting for platon-2015.03.30
>=> SHA256 Checksum OK for platon/2015.03.30/platon.tar.gz.
>===========================================================================
>=======================<phase: patch-depends  >============================
>===========================================================================
>=======================<phase: patch          >============================
>===>  Patching for platon-2015.03.30
>/usr/bin/gunzip -f /wrkdirs/usr/ports/biology/platon/work/platon/platon.f.gz /wrkdirs/usr/ports/biology/platon/work/platon/xdrvr.c.gz
>===>  Applying FreeBSD patches for platon-2015.03.30
>===========================================================================
>=======================<phase: build-depends  >============================
>===>   platon-2015.03.30 depends on executable: gfortran48 - not found
>===>   Installing existing package /packages/All/gcc-4.8.5.txz
>[102amd64-default-job-01] Installing gcc-4.8.5...
>[102amd64-default-job-01] `-- Installing indexinfo-0.2.4...
>[102amd64-default-job-01] `-- Extracting indexinfo-0.2.4: .... done
>[102amd64-default-job-01] `-- Installing mpc-1.0.3...
>[102amd64-default-job-01] |   `-- Installing gmp-5.1.3_2...
>[102amd64-default-job-01] |   `-- Extracting gmp-5.1.3_2: .......... done
>[102amd64-default-job-01] |   `-- Installing mpfr-3.1.2_2...
>[102amd64-default-job-01] |   `-- Extracting mpfr-3.1.2_2: .......... done
>[102amd64-default-job-01] `-- Extracting mpc-1.0.3: ...... done
>[102amd64-default-job-01] `-- Installing binutils-2.25.1...
>[102amd64-default-job-01] |   `-- Installing gettext-runtime-0.19.6...
>[102amd64-default-job-01] |   `-- Extracting gettext-runtime-0.19.6: .......... done
>[102amd64-default-job-01] `-- Extracting binutils-2.25.1: .......... done
>[102amd64-default-job-01] `-- Installing gcc-ecj-4.5...
>[102amd64-default-job-01] `-- Extracting gcc-ecj-4.5: . done
>[102amd64-default-job-01] Extracting gcc-4.8.5: .......... done
>Message from gcc-4.8.5:
>To ensure binaries built with this toolchain find appropriate versions
>of the necessary run-time libraries, you may want to link using
>
>  -Wl,-rpath=/usr/local/lib/gcc48
>
>For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
>transparently.
>===>   platon-2015.03.30 depends on executable: gfortran48 - found
>===>   Returning to build of platon-2015.03.30
>===>   platon-2015.03.30 depends on file: /usr/local/bin/as - found
>===>   platon-2015.03.30 depends on file: /usr/local/libdata/pkgconfig/x11.pc - not found
>===>   Installing existing package /packages/All/libX11-1.6.3,1.txz
>[102amd64-default-job-01] Installing libX11-1.6.3,1...
>[102amd64-default-job-01] `-- Installing xproto-7.0.28...
>[102amd64-default-job-01] `-- Extracting xproto-7.0.28: .......... done
>[102amd64-default-job-01] `-- Installing kbproto-1.0.7...
>[102amd64-default-job-01] `-- Extracting kbproto-1.0.7: .......... done
>[102amd64-default-job-01] `-- Installing libXdmcp-1.1.2...
>[102amd64-default-job-01] `-- Extracting libXdmcp-1.1.2: ......... done
>[102amd64-default-job-01] `-- Installing libxcb-1.11.1...
>[102amd64-default-job-01] |   `-- Installing libxml2-2.9.2_3...
>[102amd64-default-job-01] |   `-- Extracting libxml2-2.9.2_3: .......... done
>[102amd64-default-job-01] |   `-- Installing libpthread-stubs-0.3_6...
>[102amd64-default-job-01] |   `-- Extracting libpthread-stubs-0.3_6: ..... done
>[102amd64-default-job-01] |   `-- Installing libXau-1.0.8_3...
>[102amd64-default-job-01] |   `-- Extracting libXau-1.0.8_3: .......... done
>[102amd64-default-job-01] `-- Extracting libxcb-1.11.1: .......... done
>[102amd64-default-job-01] Extracting libX11-1.6.3,1: .......... done
>===>   platon-2015.03.30 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found
>===>   Returning to build of platon-2015.03.30
>===========================================================================
>=======================<phase: lib-depends    >============================
>===========================================================================
>=======================<phase: configure      >============================
>===>  Configuring for platon-2015.03.30
>===========================================================================
>=======================<phase: build          >============================
>===>  Building for platon-2015.03.30
>gfortran48   -O -Wl,-rpath=/usr/local/lib/gcc48 -c platon.f -o platon.o
>cc -O2 -pipe  -fstack-protector -fno-strict-aliasing   -I/usr/local/include -c xdrvr.c -o xdrvr.o
>gfortran48 -o platon platon.o xdrvr.o -L/usr/local/lib -lX11
>===========================================================================
>=======================<phase: run-depends    >============================
>===>   platon-2015.03.30 depends on executable: gfortran48 - found
>===>   platon-2015.03.30 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found
>===========================================================================
>=======================<phase: stage          >============================
>===>  Staging for platon-2015.03.30
>===>   Generating temporary packing list
>install  -s -m 555 /wrkdirs/usr/ports/biology/platon/work/platon/platon  /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/bin
>/bin/ln -fs platon /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/bin/pluton
>/bin/mkdir -p /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon
>/bin/mv /wrkdirs/usr/ports/biology/platon/work/platon/README* /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon/
>/bin/mv /wrkdirs/usr/ports/biology/platon/work/platon/azt.dat /wrkdirs/usr/ports/biology/platon/work/platon/bucky.spf /wrkdirs/usr/ports/biology/platon/work/platon/c476.spf /wrkdirs/usr/ports/biology/platon/work/platon/c540.cart3d /wrkdirs/usr/ports/biology/platon/work/platon/check.def /wrkdirs/usr/ports/biology/platon/work/platon/cubane.spf /wrkdirs/usr/ports/biology/platon/work/platon/cyto.spf /wrkdirs/usr/ports/biology/platon/work/platon/ml.pdb /wrkdirs/usr/ports/biology/platon/work/platon/s810c.cif /wrkdirs/usr/ports/biology/platon/work/platon/s913a.res /wrkdirs/usr/ports/biology/platon/work/platon/sucrose.spf /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon/
>/bin/mv /wrkdirs/usr/ports/biology/platon/work/platon/platon_html.tar.gz  /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon
>/bin/mv /wrkdirs/usr/ports/biology/platon/work/platon/TEST /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon/
>/usr/bin/find /wrkdirs/usr/ports/biology/platon/work/stage/usr/local/share/doc/platon -type f -print0 |	 /usr/bin/xargs -0 /bin/chmod 0644
>====> Compressing man pages (compress-man)
>===========================================================================
>=======================<phase: package        >============================
>===>  Building package for platon-2015.03.30
>===========================================================================
>====>> Cleaning up wrkdir
>===>  Cleaning for platon-2015.03.30
>build of biology/platon ended at Thu Nov 12 10:49:52 UTC 2015
>build time: 00:01:21

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Attachments on bug 204491: 163039 | 163045