Attachment 183768 Details for Bug 210579 – Update to 4.5.4

[patch] Update to 4.5.4

math-suitesparse.diff (text/plain), 7.80 KB, created by Pedro F. Giffuni on 2017-06-24 14:29:23 UTC

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Creator: Pedro F. Giffuni

Created: 2017-06-24 14:29:23 UTC

Size: 7.80 KB

patch

obsolete

>Index: math/suitesparse/Makefile
>===================================================================
>--- math/suitesparse/Makefile	(revision 444189)
>+++ math/suitesparse/Makefile	(working copy)
>@@ -2,20 +2,22 @@
> # $FreeBSD$
> 
> PORTNAME=	suitesparse
>-PORTVERSION=	4.0.2
>-PORTREVISION=	6
>+PORTVERSION=	4.5.4
> CATEGORIES=	math
>-MASTER_SITES=	http://www.cise.ufl.edu/research/sparse/SuiteSparse/
>+MASTER_SITES=	http://faculty.cse.tamu.edu/davis/SuiteSparse/
> DISTNAME=	SuiteSparse-${PORTVERSION}
> 
>-MAINTAINER=	maho@FreeBSD.org
>+MAINTAINER=	yuri@rawbw.com
> COMMENT=	SuiteSparse is a set of packages for sparse matrices calculation
> 
> LICENSE=	GPLv2 LGPL21
>-LICENSE_COMB=	multi
>+LICENSE_COMB=	dual
> 
>-USES=		fortran gmake
>+LIB_DEPENDS=	libmetis.so:math/metis \
>+		liblapack.so:math/lapack
> 
>+USES=		compiler:openmp fortran gmake
>+
> OPTIONS_RADIO=	BLAS
> OPTIONS_RADIO_BLAS=	OPENBLAS NETLIB ATLAS
> OPTIONS_DEFAULT=	OPENBLAS
>@@ -24,16 +26,9 @@
> NETLIB_USES=	blaslapack:netlib
> ATLAS_USES=	blaslapack:atlas
> 
>-.if defined (WITH_METIS)
>-LIB_DEPENDS=	libmetis.so:math/metis4
>-
> RESTRICTED=	GPL and METIS licenses are contradictory
>-.endif
>+CONFLICTS=	umfpack-[0-9]*
> 
>-CONFLICTS=	umfpack-*
>-
>-LDFLAGS+=	-L${LOCALBASE}/lib
>-
> .include <bsd.port.options.mk>
> 
> .if ${ARCH} == "sparc64"
>@@ -45,19 +40,19 @@
> USE_LDCONFIG=	yes
> WRKSRC=${WRKDIR}/SuiteSparse
> WRKSRC_SHARED=${WRKSRC}_shared
>-SVERSION=1
> 
>-.if defined (WITH_METIS)
> METIS=${LOCALBASE}/lib/libmetis.a
> METIS_PATH=${LOCALBASE}/include/metis
> CHOLMOD_CONFIG=
>-.else
>-CHOLMOD_CONFIG=		-DNPARTITION
>-.endif
>+CFLAGS+=-I${LOCALBASE}/include
>+CXXFLAGS+=-I${LOCALBASE}/include
>+MAKE_ARGS+=MY_METIS_LIB="-L${LOCALBASE}/lib -lmetis $(LDFLAGS)"
> 
> post-patch:
>+	@${RM} -r ${WRKSRC}/metis-5.1.0 ${WRKSRC}_shared/metis-5.1.0
> 	@${FIND} -X ${WRKSRC} -type f -name 'Makefile' -or -name '*.mk' | ${XARGS} \
>-	${REINPLACE_CMD} -e '\|^AR =|s|ar|${AR}|' \
>+	${REINPLACE_CMD} -i '' \
>+			-e '\|^AR =|s|ar|${AR}|' \
> 			-e '\|^BLAS =|s|=.*|= ${LDFLAGS} ${BLASLIB}|' \
> 			-e '\|^CC =|d' \
> 			-e '\|^CFLAGS =|{s|-O[1-9]\{0,1\}||g;s|=|= ${CFLAGS} $${PICFLAG} |;}' \
>@@ -79,29 +74,19 @@
> 
> do-build:
> 	@cd ${WRKSRC} ; ${SETENV} ${MAKE_ENV} PICFLAG= \
>-		${MAKE_CMD} ${_MAKE_JOBS} ${MAKE_ARGS}
>+		LD_LIBRARY_PATH=${WRKDIR}/SuiteSparse/lib ${MAKE_CMD} ${_MAKE_JOBS} ${MAKE_ARGS}
> 	@cd ${WRKSRC_SHARED} ; ${SETENV} ${MAKE_ENV} PICFLAG=${PICFLAG} \
>-		${MAKE_CMD} ${_MAKE_JOBS} ${MAKE_ARGS}
>+		LD_LIBRARY_PATH=${WRKDIR}/SuiteSparse/lib ${MAKE_CMD} ${_MAKE_JOBS} ${MAKE_ARGS}
> 
>-post-build:
>-	@for i in `find ${WRKSRC_SHARED} -type f -name '*.a'` ; do \
>-		j=$${i##*/} ; ${LD} -Bshareable -o $${i%.a}.so.${SVERSION} -x \
>-		-soname $${j%.a}.so.${SVERSION} --whole-archive $${i} ; \
>-	done
>-
> do-install:
> 	@${MKDIR} ${STAGEDIR}${PREFIX}/include/suitesparse
> 	@${LN} -sf ${PREFIX}/include/suitesparse ${STAGEDIR}${PREFIX}/include/ufsparse
> .for d in AMD BTF CAMD CCOLAMD CHOLMOD COLAMD CXSparse KLU SPQR UMFPACK
>-	@${INSTALL_DATA} ${WRKSRC}/${d}/Include/*.h ${STAGEDIR}${PREFIX}/include/suitesparse
>+	${INSTALL_DATA} ${WRKSRC}/${d}/Include/*.h ${STAGEDIR}${PREFIX}/include/suitesparse
> .endfor
>-	@${INSTALL_DATA} ${WRKSRC}/SuiteSparse_config/SuiteSparse_config.h ${STAGEDIR}${PREFIX}/include/suitesparse
>-	@${INSTALL_DATA} ${WRKSRC}/UMFPACK/Source/umf_config.h ${STAGEDIR}${PREFIX}/include/suitesparse
>-	@${INSTALL_DATA} ${WRKSRC}/SPQR/Include/*.hpp ${STAGEDIR}${PREFIX}/include/suitesparse
>-	@for i in `find ${WRKSRC_SHARED} -type f -name '*.a'` ; do \
>-		${INSTALL_DATA} ${WRKSRC}/$${i##${WRKSRC_SHARED}/} \
>-		$${i%.a}.so.${SVERSION} ${STAGEDIR}${PREFIX}/lib ; \
>-		j=$${i##*/} ;  ${LN} -sf $${j%.a}.so.${SVERSION} ${STAGEDIR}${PREFIX}/lib/$${j%.a}.so ; \
>-	done
>+	${INSTALL_DATA} ${WRKSRC}/SuiteSparse_config/SuiteSparse_config.h ${STAGEDIR}${PREFIX}/include/suitesparse
>+	${INSTALL_DATA} ${WRKSRC}/UMFPACK/Source/umf_config.h ${STAGEDIR}${PREFIX}/include/suitesparse
>+	${INSTALL_DATA} ${WRKSRC}/SPQR/Include/*.hpp ${STAGEDIR}${PREFIX}/include/suitesparse
>+	${INSTALL_DATA} ${WRKSRC_SHARED}/lib/*.so* ${STAGEDIR}${PREFIX}/lib/
> 
> .include <bsd.port.mk>
>Index: math/suitesparse/distinfo
>===================================================================
>--- math/suitesparse/distinfo	(revision 444189)
>+++ math/suitesparse/distinfo	(working copy)
>@@ -1,2 +1,3 @@
>-SHA256 (SuiteSparse-4.0.2.tar.gz) = 93b5928987fe010808b3fdff3e7edef42fb2d8cfd65b09dd6d4c41756acb0050
>-SIZE (SuiteSparse-4.0.2.tar.gz) = 22421100
>+TIMESTAMP = 1498313954
>+SHA256 (SuiteSparse-4.5.4.tar.gz) = 698b5c455645bb1ad29a185f0d52025f3bd7cb7261e182c8878b0eb60567a714
>+SIZE (SuiteSparse-4.5.4.tar.gz) = 30309663
>Index: math/suitesparse/pkg-descr
>===================================================================
>--- math/suitesparse/pkg-descr	(revision 444189)
>+++ math/suitesparse/pkg-descr	(working copy)
>@@ -12,4 +12,4 @@
>     * CSparse: a concise sparse matrix package
>     * CXSparse: and extended version of CSparse
> 
>-WWW: http://www.cise.ufl.edu/research/sparse/SuiteSparse/
>+WWW: http://faculty.cse.tamu.edu/davis/suitesparse.html
>Index: math/suitesparse/pkg-plist
>===================================================================
>--- math/suitesparse/pkg-plist	(revision 444189)
>+++ math/suitesparse/pkg-plist	(working copy)
>@@ -1,7 +1,7 @@
>-include/suitesparse/SuiteSparse_config.h
> include/suitesparse/SuiteSparseQR.hpp
> include/suitesparse/SuiteSparseQR_C.h
> include/suitesparse/SuiteSparseQR_definitions.h
>+include/suitesparse/SuiteSparse_config.h
> include/suitesparse/amd.h
> include/suitesparse/amd_internal.h
> include/suitesparse/btf.h
>@@ -11,11 +11,15 @@
> include/suitesparse/ccolamd.h
> include/suitesparse/cholmod.h
> include/suitesparse/cholmod_blas.h
>+include/suitesparse/cholmod_camd.h
> include/suitesparse/cholmod_check.h
> include/suitesparse/cholmod_cholesky.h
> include/suitesparse/cholmod_complexity.h
> include/suitesparse/cholmod_config.h
> include/suitesparse/cholmod_core.h
>+include/suitesparse/cholmod_function.h
>+include/suitesparse/cholmod_gpu.h
>+include/suitesparse/cholmod_gpu_kernels.h
> include/suitesparse/cholmod_internal.h
> include/suitesparse/cholmod_io64.h
> include/suitesparse/cholmod_matrixops.h
>@@ -29,6 +33,8 @@
> include/suitesparse/klu_internal.h
> include/suitesparse/klu_version.h
> include/suitesparse/spqr.hpp
>+include/suitesparse/spqrgpu.hpp
>+include/suitesparse/umf_config.h
> include/suitesparse/umfpack.h
> include/suitesparse/umfpack_col_to_triplet.h
> include/suitesparse/umfpack_defaults.h
>@@ -62,50 +68,43 @@
> include/suitesparse/umfpack_transpose.h
> include/suitesparse/umfpack_triplet_to_col.h
> include/suitesparse/umfpack_wsolve.h
>-include/suitesparse/umf_config.h
> include/ufsparse
>-lib/libamd.a
> lib/libamd.so
>-lib/libamd.so.1
>-lib/libbtf.a
>+lib/libamd.so.2
>+lib/libamd.so.2.4.6
> lib/libbtf.so
> lib/libbtf.so.1
>-lib/libcamd.a
>+lib/libbtf.so.1.2.6
> lib/libcamd.so
>-lib/libcamd.so.1
>-lib/libccolamd.a
>+lib/libcamd.so.2
>+lib/libcamd.so.2.4.6
> lib/libccolamd.so
>-lib/libccolamd.so.1
>-lib/libcerbla.a
>-lib/libcerbla.so
>-lib/libcerbla.so.1
>-lib/libcholmod.a
>+lib/libccolamd.so.2
>+lib/libccolamd.so.2.9.6
> lib/libcholmod.so
>-lib/libcholmod.so.1
>-lib/libcolamd.a
>+lib/libcholmod.so.3
>+lib/libcholmod.so.3.0.11
> lib/libcolamd.so
>-lib/libcolamd.so.1
>-lib/libcsparse.a
>-lib/libcsparse.so
>-lib/libcsparse.so.1
>-lib/libcxsparse.a
>+lib/libcolamd.so.2
>+lib/libcolamd.so.2.9.6
> lib/libcxsparse.so
>-lib/libcxsparse.so.1
>-lib/libklu.a
>+lib/libcxsparse.so.3
>+lib/libcxsparse.so.3.1.9
> lib/libklu.so
> lib/libklu.so.1
>-lib/libldl.a
>+lib/libklu.so.1.3.8
> lib/libldl.so
>-lib/libldl.so.1
>-lib/librbio.a
>+lib/libldl.so.2
>+lib/libldl.so.2.2.6
> lib/librbio.so
>-lib/librbio.so.1
>-lib/libspqr.a
>+lib/librbio.so.2
>+lib/librbio.so.2.2.6
> lib/libspqr.so
>-lib/libspqr.so.1
>-lib/libsuitesparseconfig.a
>+lib/libspqr.so.2
>+lib/libspqr.so.2.0.8
> lib/libsuitesparseconfig.so
>-lib/libsuitesparseconfig.so.1
>-lib/libumfpack.a
>+lib/libsuitesparseconfig.so.4
>+lib/libsuitesparseconfig.so.4.5.4
> lib/libumfpack.so
>-lib/libumfpack.so.1
>+lib/libumfpack.so.5
>+lib/libumfpack.so.5.7.6

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Attachments on bug 210579: 171804 | 183768 | 186491 | 192675