Attachment 188160 Details for Bug 211768 – net/py-mpi4py-openmpi2: poudriere testport

net/py-mpi4py-openmpi2: poudriere testport

py-mpi4py-openmpi2.testport (text/plain), 50.34 KB, created by Anonymized Account on 2017-11-21 15:20:21 UTC

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Creator: Anonymized Account

Created: 2017-11-21 15:20:21 UTC

Size: 50.34 KB

patch

obsolete

>[00:00:00] ====>> Creating the reference jail... done
>[00:00:46] ====>> Mounting system devices for 11-amd64-default
>[00:00:46] ====>> Mounting ports/packages/distfiles
>[00:00:46] ====>> Stashing existing package repository
>[00:00:48] ====>> Mounting ccache from: /var/cache/poudriere_ccache
>[00:00:48] ====>> Mounting packages from: /usr/local/poudriere/data/packages/11-amd64-default
>[00:00:48] ====>> Appending to make.conf: /usr/local/etc/poudriere.d/11-amd64-make.conf
>/etc/resolv.conf -> /usr/local/poudriere/data/.m/11-amd64-default/ref/etc/resolv.conf
>[00:00:48] ====>> Starting jail 11-amd64-default
>[00:00:50] ====>> Logs: /usr/local/poudriere/data/logs/bulk/11-amd64-default/2017-11-21_13h23m23s
>[00:00:50] ====>> Loading MOVED
>[00:00:52] ====>> Calculating ports order and dependencies
>[00:00:58] ====>> Sanity checking the repository
>[00:00:58] ====>> Checking packages for incremental rebuild needs
>[00:01:19] ====>> Deleting stale symlinks
>[00:01:19] ====>> Deleting empty directories
>[00:01:19] ====>> Cleaning the build queue
>[00:01:19] ====>> Recording filesystem state for prepkg... done
>[00:01:20] ====>> Committing packages to repository
>[00:01:20] ====>> Removing old packages
>[00:01:20] ====>> Building with flags: 
>[00:01:20] ====>> Removing existing /usr/local
>build started at Tue Nov 21 13:24:43 CET 2017
>port directory: /usr/ports/net/py-mpi4py-openmpi2
>building for: FreeBSD 11-amd64-default 11.1-RELEASE-p1 FreeBSD 11.1-RELEASE-p1 amd64
>maintained by: mike.d.ft402@gmail.com
>Makefile ident: 
>Poudriere version: 3.1.21
>Host OSVERSION: 1101001
>Jail OSVERSION: 1101001
>Job Id: 
>
>---Begin Environment---
>SHELL=/bin/csh
>OSVERSION=1101001
>UNAME_v=FreeBSD 11.1-RELEASE-p1
>UNAME_r=11.1-RELEASE-p1
>BLOCKSIZE=K
>MAIL=/var/mail/root
>STATUS=1
>WARNING_WAIT=0
>SAVED_TERM=xterm
>NO_WARNING_PKG_INSTALL_EOL=yes
>MASTERMNT=/usr/local/poudriere/data/.m/11-amd64-default/ref
>PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
>POUDRIERE_BUILD_TYPE=bulk
>OLDPWD=/usr/local/poudriere/data/.m/11-amd64-default/ref/.p
>PWD=/
>MASTERNAME=11-amd64-default
>SCRIPTPREFIX=/usr/local/share/poudriere
>USER=root
>HOME=/root
>POUDRIERE_VERSION=3.1.21
>SCRIPTPATH=/usr/local/share/poudriere/testport.sh
>TRYBROKEN=yes
>LIBEXECPREFIX=/usr/local/libexec/poudriere
>LOCALBASE=/usr/local
>DEV_WARNING_WAIT=0
>POUDRIEREPATH=/usr/local/bin/poudriere
>---End Environment---
>
>---Begin Poudriere Port Flags/Env---
>PORT_FLAGS=
>PKGENV=PACKAGES=/tmp/pkgs PKGREPOSITORY=/tmp/pkgs
>---End Poudriere Port Flags/Env---
>
>---Begin OPTIONS List---
>---End OPTIONS List---
>
>--CONFIGURE_ARGS--
>
>--End CONFIGURE_ARGS--
>
>--CONFIGURE_ENV--
>PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work  HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
>--End CONFIGURE_ENV--
>
>--MAKE_ENV--
>XDG_DATA_HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work  HOME=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
>--End MAKE_ENV--
>
>--PLIST_SUB--
>PYTHON_INCLUDEDIR=include/python2.7
>PYTHON_LIBDIR=lib/python2.7
>PYTHON_PLATFORM=freebsd11
>PYTHON_PYOEXTENSION=pyo
>PYTHON_SITELIBDIR=lib/python2.7/site-packages
>PYTHON_SUFFIX=27
>PYTHON_VER=2.7
>PYTHON_VERSION=python2.7
>PYTHON2=""
>PYTHON3="@comment
>"
>OSREL=11.1
>PREFIX=%D
>LOCALBASE=/usr/local
>RESETPREFIX=/usr/local
>PORTDOCS=""
>PORTEXAMPLES=""
>LIB32DIR=lib
>DOCSDIR="share/doc/mpi4py-openmpi2"
>EXAMPLESDIR="share/examples/mpi4py-openmpi2"
>DATADIR="share/mpi4py-openmpi2"
>WWWDIR="www/mpi4py-openmpi2"
>ETCDIR="etc/mpi4py-openmpi2"
>--End PLIST_SUB--
>
>--SUB_LIST--
>PREFIX=/usr/local
>LOCALBASE=/usr/local
>DATADIR=/usr/local/share/mpi4py-openmpi2
>DOCSDIR=/usr/local/share/doc/mpi4py-openmpi2
>EXAMPLESDIR=/usr/local/share/examples/mpi4py-openmpi2
>WWWDIR=/usr/local/www/mpi4py-openmpi2
>ETCDIR=/usr/local/etc/mpi4py-openmpi2
>--End SUB_LIST--
>
>---Begin make.conf---
>WITH_CCACHE_BUILD=yes
>CCACHE_DIR=/root/.ccache
>USE_PACKAGE_DEPENDS=yes
>BATCH=yes
>WRKDIRPREFIX=/wrkdirs
>PORTSDIR=/usr/ports
>PACKAGES=/packages
>DISTDIR=/distfiles
>FORCE_PACKAGE=yes
>PACKAGE_BUILDING=yes
>#### /usr/local/etc/poudriere.d/11-amd64-make.conf ####
># XXX
>#> I actually was puzzled with texlive not installing and remembered
>#> seeing someone had issues with the new collate stuff.  I simply
>#> tried the latter setting with a "Let's see what happens".  It worked.
>#>
>#> Moral 1 of the story.  Build ports with LC_ALL= and LC_COLLATE=C.
>
># Distfiles
>RANDOMIZE_MASTER_SITE=yes
>FETCH_BEFORE_ARGS=-p4 -T120
>
># Languages and compilers
>WITH_CCACHE_BUILD=yes
>CCACHE_DIR=/root/.ccache
>#C=gcc
>#CXX=g++
>#CPP=cpp
>OPTIONS_SET= BOOTSTRAP FORTRAN PERL LIBYAML LUAJIT SBCL
>OPTIONS_UNSET= CMUCL GCL
>#PYTHON_DEFAULT_VERSION='python3.5'
># Needed for print/pdftk
>.if ${.CURDIR:M*/lang/gcc*}
> OPTIONS_SET+= JAVA
>.else
> OPTIONS_UNSET+= JAVA
>.endif
> OPTIONS_UNSET+= GLIB
>
># CAD
>OPTIONS_SET+= NGSPICE
>OPTIONS_UNSET+= GNUCAP
>
># Cluster
>OPTIONS_UNSET+= SLURM TORQUE
>
># Documentation
>OPTIONS_SET+= EXAMPLES MANPAGES TCLMAN TKMAN
>OPTIONS_UNSET+= DOCBOOK HELPBROWSER HTMLDOCS
>OPTIONS_UNSET+= TESTS
>
># Emulation
># Already default as of 2016-10-31
>#DEFAULT_VERSIONS+=linux=c6
>
># Filesystem
>OPTIONS_UNSET+= FAM GAMIN GAM_POLLER GDA GIO GNOMEVFS GNOMEVFS2 GVFS LIBINOTIFY 
>
># Graphics
>OPTIONS_SET+= FONTCONFIG OPENGL PNG X11 XFT LCD_FILTERING MESA MESAGL VAAPI VDPAU
>OPTIONS_UNSET+= COLORD DVI NVIDIA NVIDIA_GL
>
># Integration
>OPTIONS_UNSET+= DBUS GCONF GNOME GNOME_PROXY GOBJECT GSETTINGS 
>
># Hardware
>OPTIONS_SET+= ACPI_PM DEVD USB
>#OPTIONS_UNSET+= BACKSPACE_KEY DELETE_KEY
>OPTIONS_UNSET+= HAL
>
># Locales
>OPTIONS_SET+= IDN INSULTS LIBIDN METRIC NLS UNICODE UTF8
>OPTIONS_UNSET+= FRIBIDI SCIM XIM
>
># Math
>OPTIONS_SET+= ASM AVX AVX2 CPU_OPTS DYNAMIC_ARCH LARGE_STACK MMX OPENBLAS OPENMP RAYOPTIMIZATION SIMD SMP SSE SSE2 THREADS X86_ASM XS
>OPTIONS_UNSET+= OPTIMIZATION OPTIMIZED_CFLAGS OPTIMIZED_FLAGS PGO
>OPTIONS_UNSET+= ATLAS NETLIB GOTOBLAS DEBUG
>#OPTIONS_UNSET+= STATIC
>
># Multimedia
>OPTIONS_SET+= AAC ACOUSTID FFMPEG FLAC ID3TAG LAME MMS OPENAL V4L VORBIS VORBISENC WAV YTDL 
>#OPTIONS_SET+= OSS
>OPTIONS_UNSET+= ALSA ESD ESOUND GSTREAMER JACK NAS PORTAUDIO PULSE PULSEAUDIO
>
># Security
>WITH_SSP=yes
>OPTIONS_SET+= OPENSSL PAM SASL GSSAPI_BASE
>OPTIONS_UNSET+= CONSOLEKIT GCRYPT GNUTLS GSSAPI_HEIMDAL GSSAPI_MIT GSSAPI_NONE KEYRING POLKIT POLICYKIT
># Curl does not like GSSAPI_BASE with OPENSSL_PORT
>#.if ${.CURDIR}!="/usr/ports/ftp/curl"
># DEFAULT_VERSIONS+= ssl=openssl
>#.endif
># LibreSSL support broken in tor
>#.if ${.CURDIR}!="/usr/ports/security/tor"
># DEFAULT_VERSIONS+= ssl=libressl
># # https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=192511.
># # https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=195508
># OPENSSL_SHLIBVER= 30
>#.endif
>
># TCP
>OPTIONS_SET+= CURL FETCH GEOIP IPV6 HTTP2 HTTPV2
>OPTIONS_UNSET+= AVAHI BONJOUR GNOME_PROXY MDNS MDNSRESPONDER SAMBA SMB
>
># Text processing
>OPTIONS_SET+= HUNSPELL LIBGUESS
>OPTIONS_UNSET+= ASPELL ENCA ENCHANT GTKSPELL ISPELL
>
># Typesetting
>OPTIONS_UNSET+= CLOUDPRINT CUPS
>TEX_DEFAULT = texlive
>
># UI
>OPTIONS_SET+= GTK2
>OPTIONS_UNSET+= GNOMEUI GUI GTK3 KDE4 QT4 QT5 WX SKINS
>OPTIONS_UNSET+= BASH BASH_COMPLETIONS IBUS NOTIFY ZSH
>QT4_OPTIONS= -CUPS -NAS QGTKSTYLE
>
># Default versions
># See /usr/ports/Mk/bsd.default-versions.mk.
>EMACS_PORT_NAME=emacs-nox11
>
># Overrides
>audio_audacity_SET+= SAMPLERATE
>audio_beets_SET+= CHROMA
># Broken audio/aacgain
>audio_beets_UNSET+= REPLAYGAIN
>audio_espeak_SET+= PORTAUDIO
>audio_musicpd_SET+= AAC ARCHIVE HTTPD LAME MMS SHOUTCAST VORBISENC
>audio_ncmpcpp_SET+= CLOCK VISUALIZER
>devel_efl_SET+= OPENGL
>#devel_efl_SET+= NVIDIA
>devel_efl_UNSET+= HARFBUZZ NVIDIA PHYSICS SSL LIBXINE V4L VLC OPENJPEG PDF PS RAW SDL SVG WEBP XCF
>devel_gcc-arm-embedded_SET+= HTML
>devel_gcc-arm-embedded_UNSET+= PDF
>devel_simgear_SET+= EXPERIMENTAL_OPTS
>emulators_i386-wine_UNSET+= GECKO MONO
>emulators_i386-wine-compholio_UNSET+= GECKO MONO
>emulators_i386-wine-devel_UNSET+= GECKO MONO
>games_xptools_SET+= OPTIMIZED_CFLAGS
>games_minetest_SET+= CLIENT FREETYPE LEVELDB LUAJIT NLS SERVER SOUND
>#games_minetest_SET+= FREETYPE LEVELDB LUAJIT NLS SERVER
>#games_minetest_UNSET+= CLIENT SOUND
>graphics_blender_SET+= CAMERATRACK COLLADA CYCLES CYCLESOSL MOD_OCEANSIM
>#XXX Broken FFMPEG support
>graphics_blender_UNSET+= FFMPEG REDCODE
>#XXX OPENMP breaks inkscape, but disabling it breaks ImageMagick as of 6.9.9-15
>graphics_ImageMagick_UNSET+= OPENMP
># Required by x11-toolkits/pango
>graphics_cairo_SET+= GLIB
>graphics_gimp_UNSET+= PRINT
>graphics_gimp-help_SET+= EN
>graphics_gimp-help_UNSET+= ALL DE ES FR IT JA KO NL NN PL RU SV ZH_CN
>graphics_inkscape_UNSET+= CDR POPPLER VISIO WPG
># Breaks ffmpeg on 11.0 as of 2016-10-16
>multimedia_ffmpeg_UNSET+= OPENCV
>multimedia_handbrake_UNSET+= X11
>irc_bitlbee_SET+= JABBER MSN OSCAR OTR TWITTER YAHOO LIBEVENT SKYPE
>#irc_bitlbee_SET+= LIBPURPLE
>irc_minbif_SET+= PLUGINS VIDEO
>irc_ngircd_UNSET+= ICONV
># GCL: broken EMACS!
>lang_gcl_UNSET+= EMACS
>lang_sbcl_SET+= SBCL
>mail_fetchmail_UNSET+= X11
>mail_mutt_SET+= NNTP
>mail_postfix_SET+= TLS
>math_gnuplot_SET+= GRIDBOX
>math_gnuplot_UNSET+= TEX
>misc_freebsd-doc-de_SET+= HTML_SPLIT TXT
>misc_freebsd-doc-de_UNSET+= HTML PDF PS
>misc_freebsd-doc-en_SET+= HTML_SPLIT TXT
>misc_freebsd-doc-en_UNSET+= HTML PDF PS
>misc_freebsd-doc-ru_SET+= HTML_SPLIT TXT
>misc_freebsd-doc-ru_UNSET+= HTML PDF PS
>glib_networking_SET= GNUTLS
>multimedia_libass_SET+= FONTCONFIG
>multimedia_mpv_SET+= CACA
># XXX mpv 0.18.0 segfalults with luajit 2.0.4_1
>multimedia_mpv_UNSET+= LUAJIT
>multimedia_musicpd_SET+= HTTPD SHOUTCAST
>net-im_skype-devel_SET=
>net-im_skype-devel_UNSET= VIDEO NVIDIA_GL
>net-im_telegram-purple_UNSET= WEBP
>net_mtr_UNSET= X11
># Fetch is unsupported for ports openssl
>net_openldap24-client_UNSET= FETCH
>#security_ca_root_nss_SET+= ETCSYMLINK
>security_gnupg_SET+= CURL SUID_GPG
>security_openssl_SET+= EC
># ASM broken in OpenSSL 1.0.2 (bug 198788)
>security_openssl_UNSET+= ASM
>security_pinentry_SET+= TTY
>security_pinentry_UNSET+= GNOME3 GTK2 NCURSES QT4
>sysutils_conky_SET+= APCUPSD LUA METAR MOC MPD RSS X1 XOAP ARGB DOUBLE_BUFFERING
># Firefox won't build without OPTIMIZED_CFLAGS as of 56.0.1_4 (bug 222641)
>www_firefox_SET=ALSA OPTIMIZED_CFLAGS
>www_libxul_SET=ALSA
>www_nginx_SET=HTTP_FANCYINDEX HTTP_REWRITE
>www_nginx_UNSET=HTTP_CACHE HTTP_STATUS
>www_nginx-devel_SET=HTTP_FANCYINDEX HTTP_REWRITE
>www_nginx-devel_UNSET=HTTP_CACHE HTTP_STATUS
># PGO requires running X11 during build
>www_libxul_UNSET=PGO
>www_webkit2-gtk3_UNSET=GEOIP
>x11_xautolock_UNSET+= XLOCK
>x11_xscreensaver_SET+= ANCLOCK
># Error: 'bin/xglock' is referring to /tmp/usr/ports/x11/xlockmore/work/stage
>x11_xlockmore_UNSET+= GTK2
>#x11-drivers_xf86-video-intel_SET+= SNA
>#x11-drivers_xf86-video-intel_UNSET+= UXA
>x11-fonts_terminus-font_SET+= AO2 GE2 LL2 HI2
>x11-toolkits_gtk20_SET+= SHIFT_INSERT
>x11-toolkits_gtk30_SET+= SHIFT_INSERT
>x11-themes_adapta-gtk-theme_UNSET+= CHROME CINNAMON DOCS GNOMESHELL MATE METACITY OPENBOX XFCE
>#### /usr/ports/Mk/Scripts/ports_env.sh ####
>ARCH=amd64
>CONFIGURE_MAX_CMD_LEN=262144
>HAVE_COMPAT_IA32_KERN=YES
>OPSYS=FreeBSD
>OSREL=11.1
>OSVERSION=1101001
>PYTHONBASE=/usr/local
>UID=0
>_JAVA_OS_LIST_REGEXP=native|linux
>_JAVA_VENDOR_LIST_REGEXP=openjdk|oracle|sun
>_JAVA_VERSION_LIST_REGEXP=1.6|1.7|1.8|1.9|1.6\+|1.7\+|1.8\+|1.9\+
>_OSRELEASE=11.1-RELEASE-p1
>_SMP_CPUS=2
>#### Misc Poudriere ####
>GID=0
>---End make.conf---
>--Resource limits--
>cpu time               (seconds, -t)  unlimited
>file size           (512-blocks, -f)  unlimited
>data seg size           (kbytes, -d)  1048576
>stack size              (kbytes, -s)  524288
>core file size      (512-blocks, -c)  unlimited
>max memory size         (kbytes, -m)  unlimited
>locked memory           (kbytes, -l)  unlimited
>max user processes              (-u)  7506
>open files                      (-n)  1024
>virtual mem size        (kbytes, -v)  unlimited
>swap limit              (kbytes, -w)  unlimited
>socket buffer size       (bytes, -b)  unlimited
>pseudo-terminals                (-p)  unlimited
>kqueues                         (-k)  unlimited
>umtx shared locks               (-o)  unlimited
>--End resource limits--
>=======================<phase: check-sanity   >============================
>===>  License BSD3CLAUSE accepted by the user
>===========================================================================
>=======================<phase: pkg-depends    >============================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/sbin/pkg - not found
>===>   Installing existing package /packages/All/pkg-1.10.1.txz
>[11-amd64-default] Installing pkg-1.10.1...
>[11-amd64-default] Extracting pkg-1.10.1: .......... done
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/sbin/pkg - found
>===>   Returning to build of py27-mpi4py-openmpi2-2.0.0
>===========================================================================
>=======================<phase: fetch-depends  >============================
>===========================================================================
>=======================<phase: fetch          >============================
>===>  License BSD3CLAUSE accepted by the user
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/sbin/pkg - found
>===> Fetching all distfiles required by py27-mpi4py-openmpi2-2.0.0 for building
>===========================================================================
>=======================<phase: checksum       >============================
>===>  License BSD3CLAUSE accepted by the user
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/sbin/pkg - found
>===> Fetching all distfiles required by py27-mpi4py-openmpi2-2.0.0 for building
>=> SHA256 Checksum OK for mpi4py-mpi4py-2.0.0_GH0.tar.gz.
>===========================================================================
>=======================<phase: extract-depends>============================
>===========================================================================
>=======================<phase: extract        >============================
>===>  License BSD3CLAUSE accepted by the user
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/sbin/pkg - found
>===> Fetching all distfiles required by py27-mpi4py-openmpi2-2.0.0 for building
>===>  Extracting for py27-mpi4py-openmpi2-2.0.0
>=> SHA256 Checksum OK for mpi4py-mpi4py-2.0.0_GH0.tar.gz.
>===========================================================================
>=======================<phase: patch-depends  >============================
>===========================================================================
>=======================<phase: patch          >============================
>===>  Patching for py27-mpi4py-openmpi2-2.0.0
>cp -f /usr/ports/net/py-mpi4py-openmpi2/files/mpi.cfg /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/mpi4py-2.0.0/
>===========================================================================
>=======================<phase: build-depends  >============================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on executable: cython - not found
>===>   Installing existing package /packages/All/cython-0.26.txz
>[11-amd64-default] Installing cython-0.26...
>[11-amd64-default] `-- Installing py27-setuptools-36.5.0...
>[11-amd64-default] |   `-- Installing python27-2.7.14_1...
>[11-amd64-default] |   | `-- Installing gettext-runtime-0.19.8.1_1...
>[11-amd64-default] |   |   `-- Installing indexinfo-0.2.6...
>[11-amd64-default] |   |   `-- Extracting indexinfo-0.2.6: .... done
>[11-amd64-default] |   | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
>[11-amd64-default] |   | `-- Installing libffi-3.2.1_1...
>[11-amd64-default] |   | `-- Extracting libffi-3.2.1_1: .......... done
>[11-amd64-default] |   | `-- Installing readline-7.0.3...
>[11-amd64-default] |   | `-- Extracting readline-7.0.3: .......... done
>[11-amd64-default] |   `-- Extracting python27-2.7.14_1: .......... done
>[11-amd64-default] `-- Extracting py27-setuptools-36.5.0: .......... done
>[11-amd64-default] Extracting cython-0.26: .......... done
>Message from python27-2.7.14_1:
>===========================================================================
>
>Note that some standard Python modules are provided as separate ports
>as they require additional dependencies. They are available as:
>
>bsddb           databases/py-bsddb
>gdbm            databases/py-gdbm
>sqlite3         databases/py-sqlite3
>tkinter         x11-toolkits/py-tkinter
>
>===========================================================================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on executable: cython - found
>===>   Returning to build of py27-mpi4py-openmpi2-2.0.0
>===>   py27-mpi4py-openmpi2-2.0.0 depends on package: py27-setuptools>0 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/python2.7 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/ccache - not found
>===>   Installing existing package /packages/All/ccache-3.3.4_8.txz
>[11-amd64-default] Installing ccache-3.3.4_8...
>[11-amd64-default] Extracting ccache-3.3.4_8: .......... done
>Create compiler links...
>create symlink for cc
>create symlink for cc (world)
>create symlink for c++
>create symlink for c++ (world)
>create symlink for CC
>create symlink for CC (world)
>create symlink for clang
>create symlink for clang (world)
>create symlink for clang++
>create symlink for clang++ (world)
>Message from ccache-3.3.4_8:
>NOTE:
>Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for
>information on using ccache with FreeBSD ports and src.
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/ccache - found
>===>   Returning to build of py27-mpi4py-openmpi2-2.0.0
>===========================================================================
>=======================<phase: lib-depends    >============================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on shared library: libmpi.so - not found
>===>   Installing existing package /packages/All/openmpi2-2.1.1_1.txz
>[11-amd64-default] Installing openmpi2-2.1.1_1...
>[11-amd64-default] `-- Installing gcc6-6.4.0_2...
>[11-amd64-default] |   `-- Installing binutils-2.28,1...
>[11-amd64-default] |   `-- Extracting binutils-2.28,1: .......... done
>[11-amd64-default] |   `-- Installing gcc-ecj-4.5...
>[11-amd64-default] |   `-- Extracting gcc-ecj-4.5: . done
>[11-amd64-default] |   `-- Installing gmp-6.1.2...
>[11-amd64-default] |   `-- Extracting gmp-6.1.2: .......... done
>[11-amd64-default] |   `-- Installing mpc-1.0.3...
>[11-amd64-default] |   | `-- Installing mpfr-3.1.6...
>[11-amd64-default] |   | `-- Extracting mpfr-3.1.6: .......... done
>[11-amd64-default] |   `-- Extracting mpc-1.0.3: ...... done
>[11-amd64-default] `-- Extracting gcc6-6.4.0_2: .......... done
>create symlink for gcc6
>create symlink for gcc6 (world)
>create symlink for g++6
>create symlink for g++6 (world)
>[11-amd64-default] `-- Installing hwloc-1.11.2...
>[11-amd64-default] |   `-- Installing libpciaccess-0.13.5...
>[11-amd64-default] |   | `-- Installing pciids-20171011...
>[11-amd64-default] |   | `-- Extracting pciids-20171011: ..... done
>[11-amd64-default] |   `-- Extracting libpciaccess-0.13.5: ...... done
>[11-amd64-default] |   `-- Installing libxml2-2.9.4...
>[11-amd64-default] |   `-- Extracting libxml2-2.9.4: .......... done
>[11-amd64-default] `-- Extracting hwloc-1.11.2: .......... done
>[11-amd64-default] `-- Installing libevent-2.1.8...
>[11-amd64-default] `-- Extracting libevent-2.1.8: .......... done
>[11-amd64-default] `-- Installing libltdl-2.4.6...
>[11-amd64-default] `-- Extracting libltdl-2.4.6: .......... done
>[11-amd64-default] `-- Installing munge-0.5.12...
>[11-amd64-default] |   `-- Installing perl5-5.24.3...
>[11-amd64-default] |   `-- Extracting perl5-5.24.3: .......... done
>[11-amd64-default] `-- Extracting munge-0.5.12: ......... done
>[11-amd64-default] Extracting openmpi2-2.1.1_1: .......... done
>Message from gcc6-6.4.0_2:
>To ensure binaries built with this toolchain find appropriate versions
>of the necessary run-time libraries, you may want to link using
>
>  -Wl,-rpath=/usr/local/lib/gcc6
>
>For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
>transparently.
>Message from perl5-5.24.3:
>The /usr/bin/perl symlink has been removed starting with Perl 5.20.
>For shebangs, you should either use:
>
>#!/usr/local/bin/perl
>
>or
>
>#!/usr/bin/env perl
>
>The first one will only work if you have a /usr/local/bin/perl,
>the second will work as long as perl is in PATH.
>===>   py27-mpi4py-openmpi2-2.0.0 depends on shared library: libmpi.so - found (/usr/local/mpi/openmpi2/lib/libmpi.so)
>===>   Returning to build of py27-mpi4py-openmpi2-2.0.0
>===========================================================================
>====>> Recording filesystem state for prebuild... done
>=======================<phase: configure      >============================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on executable: cython - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on package: py27-setuptools>0 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/python2.7 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/ccache - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on shared library: libmpi.so - found (/usr/local/mpi/openmpi2/lib/libmpi.so)
>===>  Configuring for py27-mpi4py-openmpi2-2.0.0
>running config
>MPI configuration: [mpi] from 'mpi.cfg'
>MPI C compiler:    /usr/local/mpi/openmpi2/bin/mpicc
>MPI C++ compiler:  /usr/local/mpi/openmpi2/bin/mpicxx
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>/usr/local/mpi/openmpi2/bin/mpicxx -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.cxx -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicxx -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.cxx _configtest.o _configtest
>===========================================================================
>=======================<phase: build          >============================
>===>  Building for py27-mpi4py-openmpi2-2.0.0
>running build
>running build_src
>cythonizing 'mpi4py.MPI.pyx' -> 'mpi4py.MPI.c'
>running build_py
>creating build
>creating build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7
>creating build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py
>copying src/__main__.py -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py
>copying src/__init__.py -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py
>creating build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include
>creating build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/mpi4py.MPI_api.h -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/mpi4py.MPI.h -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/mpi4py.h -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/libmpi.pxd -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/__init__.pxd -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/MPI.pxd -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/__init__.pyx -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/mpi.pxi -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/include/mpi4py/mpi4py.i -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py
>copying src/MPI.pxd -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py
>copying src/libmpi.pxd -> build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py
>running build_clib
>MPI configuration: [mpi] from 'mpi.cfg'
>MPI C compiler:    /usr/local/mpi/openmpi2/bin/mpicc
>MPI C++ compiler:  /usr/local/mpi/openmpi2/bin/mpicxx
>checking for library 'lmpe' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -llmpe -o _configtest
>/usr/bin/ld: cannot find -llmpe
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'mpe' dylib library
>creating build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7
>creating build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src
>creating build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c src/lib-pmpi/mpe.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/mpe.o
>creating build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi
>/usr/local/mpi/openmpi2/bin/mpicc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/mpe.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libmpe.so
>checking for library 'vt-mpi' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt-mpi -o _configtest
>/usr/bin/ld: cannot find -lvt-mpi
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>checking for library 'vt.mpi' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt.mpi -o _configtest
>/usr/bin/ld: cannot find -lvt.mpi
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'vt' dylib library
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c src/lib-pmpi/vt.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt.o
>/usr/local/mpi/openmpi2/bin/mpicc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt.so
>checking for library 'vt-mpi' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt-mpi -o _configtest
>/usr/bin/ld: cannot find -lvt-mpi
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>checking for library 'vt.mpi' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt.mpi -o _configtest
>/usr/bin/ld: cannot find -lvt.mpi
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'vt-mpi' dylib library
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c src/lib-pmpi/vt-mpi.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt-mpi.o
>/usr/local/mpi/openmpi2/bin/mpicc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt-mpi.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt-mpi.so
>checking for library 'vt-hyb' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt-hyb -o _configtest
>/usr/bin/ld: cannot find -lvt-hyb
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>checking for library 'vt.ompi' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lvt.ompi -o _configtest
>/usr/bin/ld: cannot find -lvt.ompi
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'vt-hyb' dylib library
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -c src/lib-pmpi/vt-hyb.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt-hyb.o
>/usr/local/mpi/openmpi2/bin/mpicc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/lib-pmpi/vt-hyb.o -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt-hyb.so
>running build_ext
>MPI configuration: [mpi] from 'mpi.cfg'
>MPI C compiler:    /usr/local/mpi/openmpi2/bin/mpicc
>MPI C++ compiler:  /usr/local/mpi/openmpi2/bin/mpicxx
>checking for MPI compile and link ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>success!
>removing: _configtest.c _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for missing MPI functions/symbols ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>success!
>removing: _configtest.c _configtest.o
>checking for function 'MPI_Type_create_f90_integer' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for function 'MPI_Type_create_f90_real' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for function 'MPI_Type_create_f90_complex' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for function 'MPI_Status_c2f' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for function 'MPI_Status_f2c' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -o _configtest
>success!
>removing: _configtest.c _configtest.o _configtest
>checking for dlopen() availability ...
>checking for header 'dlfcn.h' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>success!
>removing: _configtest.c _configtest.o
>success!
>checking for library 'dl' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -ldl -o _configtest
>/usr/bin/ld: cannot find -ldl
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>checking for function 'dlopen' ...
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>/usr/local/mpi/openmpi2/bin/mpicc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -ldl -o _configtest
>/usr/bin/ld: cannot find -ldl
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'mpi4py.MPI' extension
>/usr/local/mpi/openmpi2/bin/mpicc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -DHAVE_DLFCN_H=1 -I/usr/local/include/python2.7 -c src/MPI.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/MPI.o
>In file included from src/MPI.c:4:
>src/mpi4py.MPI.c:6810:91: warning: data argument not used by format string [-Wformat-extra-args]
>    PySys_WriteStderr(((char *)"warning: could not register cleanup with Py_AtExit()\n"), 0);
>                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   ^
>src/mpi4py.MPI.c:10099:40: warning: result of comparison against a string literal is unspecified (use strncmp instead) [-Wstring-compare]
>    __pyx_t_1 = ((__pyx_v_view->format != ((char *)((char *)"B"))) != 0);
>                                       ^  ~~~~~~~~~~~~~~~~~~~~~~~
>src/mpi4py.MPI.c:20655:106: warning: data argument not used by format string [-Wformat-extra-args]
>      PySys_WriteStderr(((char *)"Fatal Python error: exception in user-defined reduction operation\n"), 0);
>                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   ^
>3 warnings generated.
>/usr/local/mpi/openmpi2/bin/mpicc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/MPI.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -L/usr/local/mpi/openmpi2/lib -Wl,-rpath=/usr/local/mpi/openmpi2/lib -lpython2.7 -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/MPI.so
>writing build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/mpi.cfg
>checking for dlopen() availability ...
>checking for header 'dlfcn.h' ...
>cc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>success!
>removing: _configtest.c _configtest.o
>success!
>checking for library 'dl' ...
>cc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>cc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -ldl -o _configtest
>/usr/bin/ld: cannot find -ldl
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>checking for function 'dlopen' ...
>cc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -I/usr/local/include/python2.7 -c _configtest.c -o _configtest.o
>cc -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing _configtest.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -ldl -o _configtest
>/usr/bin/ld: cannot find -ldl
>cc: error: linker command failed with exit code 1 (use -v to see invocation)
>failure.
>removing: _configtest.c _configtest.o
>building 'mpi4py.dl' extension
>cc -DNDEBUG -O2 -pipe -fstack-protector -fno-strict-aliasing -fPIC -DHAVE_DLFCN_H=1 -I/usr/local/include/python2.7 -c src/dynload.c -o build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/dynload.o
>cc -shared -fstack-protector -O2 -pipe -fstack-protector -fno-strict-aliasing build/temp.freebsd-11.1-RELEASE-p1-amd64-2.7/src/dynload.o -L/usr/local/lib -Lbuild/temp.freebsd-11.1-RELEASE-p1-amd64-2.7 -lpython2.7 -o build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/dl.so
>===========================================================================
>====>> Checking for filesystem violations... done
>=======================<phase: run-depends    >============================
>===>   py27-mpi4py-openmpi2-2.0.0 depends on package: py27-setuptools>0 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/python2.7 - found
>===========================================================================
>====>> Recording filesystem state for prestage... done
>=======================<phase: stage          >============================
>===>  Staging for py27-mpi4py-openmpi2-2.0.0
>===>   py27-mpi4py-openmpi2-2.0.0 depends on package: py27-setuptools>0 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/python2.7 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on shared library: libmpi.so - found (/usr/local/mpi/openmpi2/lib/libmpi.so)
>===>   Generating temporary packing list
>running install
>running build
>running build_src
>running build_py
>running build_clib
>MPI configuration: [mpi] from 'mpi.cfg'
>MPI C compiler:    /usr/local/mpi/openmpi2/bin/mpicc
>MPI C++ compiler:  /usr/local/mpi/openmpi2/bin/mpicxx
>running build_ext
>MPI configuration: [mpi] from 'mpi.cfg'
>MPI C compiler:    /usr/local/mpi/openmpi2/bin/mpicc
>MPI C++ compiler:  /usr/local/mpi/openmpi2/bin/mpicxx
>running install_lib
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/libmpi.pxd -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/mpi4py.MPI.h -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/__init__.pyx -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/__init__.pxd -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/MPI.pxd -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/mpi.pxi -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/mpi4py.h -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/include/mpi4py/mpi4py.i -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/include/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/mpi.cfg -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/__main__.py -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/__init__.py -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/dl.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/libmpi.pxd -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/MPI.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/MPI.pxd -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py
>creating /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt-hyb.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libvt-mpi.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi
>copying build/lib.freebsd-11.1-RELEASE-p1-amd64-2.7/mpi4py/lib-pmpi/libmpe.so -> /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi
>byte-compiling /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/__main__.py to __main__.pyc
>byte-compiling /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/__init__.py to __init__.pyc
>writing byte-compilation script '/tmp/tmpkFwNeg.py'
>/usr/local/bin/python2.7 -O /tmp/tmpkFwNeg.py
>removing /tmp/tmpkFwNeg.py
>running install_egg_info
>running egg_info
>creating mpi4py.egg-info
>writing mpi4py.egg-info/PKG-INFO
>writing top-level names to mpi4py.egg-info/top_level.txt
>writing dependency_links to mpi4py.egg-info/dependency_links.txt
>writing manifest file 'mpi4py.egg-info/SOURCES.txt'
>reading manifest file 'mpi4py.egg-info/SOURCES.txt'
>reading manifest template 'MANIFEST.in'
>warning: no files found matching 'docs/*.html'
>warning: no files found matching 'docs/*.pdf'
>warning: no files found matching 'docs/*.info'
>warning: no files found matching 'docs/*.[137]'
>warning: no files found matching '*' under directory 'docs/usrman'
>warning: no files found matching '*' under directory 'docs/apiref'
>no previously-included directories found matching 'misc'
>no previously-included directories found matching 'conf/appveyor'
>writing manifest file 'mpi4py.egg-info/SOURCES.txt'
>Copying mpi4py.egg-info to /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py-2.0.0-py2.7.egg-info
>running install_scripts
>writing list of installed files to '/wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/.PLIST.pymodtmp'
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/dl.so
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/MPI.so
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi/libvt-hyb.so
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi/libvt.so
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi/libvt-mpi.so
>/usr/bin/strip /wrkdirs/usr/ports/net/py-mpi4py-openmpi2/work/stage/usr/local/lib/python2.7/site-packages/mpi4py/lib-pmpi/libmpe.so
>====> Compressing man pages (compress-man)
>===========================================================================
>====> Running Q/A tests (stage-qa)
>====> Checking for pkg-plist issues (check-plist)
>===> Parsing plist
>===> Checking for items in STAGEDIR missing from pkg-plist
>===> Checking for items in pkg-plist which are not in STAGEDIR
>===> No pkg-plist issues found (check-plist)
>====>> Checking for staging violations... done
>=======================<phase: package        >============================
>===>  Building package for py27-mpi4py-openmpi2-2.0.0
>===========================================================================
>=======================<phase: install-mtree  >============================
>===========================================================================
>====>> Recording filesystem state for preinst... done
>=======================<phase: install        >============================
>===>  Installing for py27-mpi4py-openmpi2-2.0.0
>===>   py27-mpi4py-openmpi2-2.0.0 depends on package: py27-setuptools>0 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on file: /usr/local/bin/python2.7 - found
>===>   py27-mpi4py-openmpi2-2.0.0 depends on shared library: libmpi.so - found (/usr/local/mpi/openmpi2/lib/libmpi.so)
>===>  Checking if py27-mpi4py-openmpi2 already installed
>===>   Registering installation for py27-mpi4py-openmpi2-2.0.0
>[11-amd64-default] Installing py27-mpi4py-openmpi2-2.0.0...
>===========================================================================
>====>> Checking shared library dependencies
> 0x0000000000000001 NEEDED               Shared library: [libc.so.7]
> 0x0000000000000001 NEEDED               Shared library: [libmpi.so.20]
> 0x0000000000000001 NEEDED               Shared library: [libpython2.7.so.1]
> 0x0000000000000001 NEEDED               Shared library: [libthr.so.3]
>=======================<phase: deinstall      >============================
>===>  Deinstalling for py27-mpi4py-openmpi2
>===>   Deinstalling py27-mpi4py-openmpi2-2.0.0
>Updating database digests format: .......... done
>Checking integrity... done (0 conflicting)
>Deinstallation has been requested for the following 1 packages (of 0 packages in the universe):
>
>Installed packages to be REMOVED:
>	py27-mpi4py-openmpi2-2.0.0
>
>Number of packages to be removed: 1
>
>The operation will free 2 MiB.
>[11-amd64-default] [1/1] Deinstalling py27-mpi4py-openmpi2-2.0.0...
>[11-amd64-default] [1/1] Deleting files for py27-mpi4py-openmpi2-2.0.0: .......... done
>===========================================================================
>====>> Checking for extra files and directories
>[00:03:36] ====>> Installing from package
>[11-amd64-default] Installing py27-mpi4py-openmpi2-2.0.0...
>[11-amd64-default] Extracting py27-mpi4py-openmpi2-2.0.0: .......... done
>[00:03:36] ====>> Cleaning up
>===>  Cleaning for py27-mpi4py-openmpi2-2.0.0
>[00:03:36] ====>> Deinstalling package
>Updating database digests format: . done
>Checking integrity... done (0 conflicting)
>Deinstallation has been requested for the following 1 packages (of 0 packages in the universe):
>
>Installed packages to be REMOVED:
>	py27-mpi4py-openmpi2-2.0.0
>
>Number of packages to be removed: 1
>
>The operation will free 2 MiB.
>[11-amd64-default] [1/1] Deinstalling py27-mpi4py-openmpi2-2.0.0...
>[11-amd64-default] [1/1] Deleting files for py27-mpi4py-openmpi2-2.0.0: .......... done
>build of net/py-mpi4py-openmpi2 ended at Tue Nov 21 13:26:59 CET 2017
>build time: 00:02:16
>[00:03:37] ====>> Cleaning up
>[00:03:37] ====>> Unmounting file systems

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Attachments on bug 211768: 173568 | 173569 | 173570 | 173571 | 173572 | 173573 | 173574 | 173575 | 173576 | 173577 | 173578 | 173579 | 174186 | 174187 | 174189 | 174190 | 174191 | 174192 | 188153 | 188154 | 188155 | 188156 | 188157 | 188158 | 188160 | 188164 | 188165 | 188166 | 188167 | 188168 | 188169 | 188170