FreeBSD Bugzilla – Attachment 197675 Details for
Bug 231807
[NEW PORT] math/cocoalib: C++ library for doing computations in commutative algebra
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cocoalib shar file - correction 3
cocoalib.shar (text/plain), 26.22 KB, created by
Lorenzo Salvadore
on 2018-10-01 13:50:34 UTC
(
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Description:
cocoalib shar file - correction 3
Filename:
MIME Type:
Creator:
Lorenzo Salvadore
Created:
2018-10-01 13:50:34 UTC
Size:
26.22 KB
patch
obsolete
># This is a shell archive. Save it in a file, remove anything before ># this line, and then unpack it by entering "sh file". Note, it may ># create directories; files and directories will be owned by you and ># have default permissions. ># ># This archive contains: ># ># cocoalib ># cocoalib/pkg-help ># cocoalib/distinfo ># cocoalib/pkg-plist ># cocoalib/Makefile ># cocoalib/files ># cocoalib/files/patch-src_AlgebraicCore_TmpLDP.C ># cocoalib/pkg-descr ># >echo c - cocoalib >mkdir -p cocoalib > /dev/null 2>&1 >echo x - cocoalib/pkg-help >sed 's/^X//' >cocoalib/pkg-help << '05e4194686a312ee798ecb1334fbde4d' >XCoCoALib has an optional dependency on libnormaliz, which in turns >Xhas an optional dependency on libnormaliz. You can use flavors to >Xdecide how to solve the (optional) circular dependency: >X- if you set FLAVOR=normaliz then CoCoALib will not be linked with >Xlibnormaliz, even if you set the appropriate option; >X- if you set FLAVOR=cocoa (default) then libnormaliz will be linked >Xwith the installed flavor of libnormaliz or with a "cocoa" flavor of >Xlibnormaliz - i.e. with a version that is not linked to libnormaliz -, >Xthat will be built as a dependency (if you select the appropriate >Xoption). >X >XIf you want you can solve the cicular dependency with both libraries >Xlinked to each other by using either of the following solutions: >X- install libnormaliz@cocoa and cocoalib@cocoa (in this order), then >Xremove libnormaliz@cocoa and install libnormaliz@normaliz; >X- install cocoalib@normaliz and libnormaliz@normaliz (in this order), then >Xremove cocoalib@normaliz and install cocoalib@cocoa. >05e4194686a312ee798ecb1334fbde4d >echo x - cocoalib/distinfo >sed 's/^X//' >cocoalib/distinfo << '0dd047c6de9c15a75f40ca7ee4faa31f' >XTIMESTAMP = 1535050914 >XSHA256 (CoCoALib-0.99600.tgz) = 9ba8c9ea45b55d8c553969193c8d7c4c9b311db89fb4ecda3986f442d7c24750 >XSIZE (CoCoALib-0.99600.tgz) = 5346129 >0dd047c6de9c15a75f40ca7ee4faa31f >echo x - cocoalib/pkg-plist >sed 's/^X//' >cocoalib/pkg-plist << '17501fbe558b8e37ba88877463df1c99' >X%%PORTDOCS%%%%DOCSDIR%%/CoCoALib.pdf >X%%PORTDOCS%%%%DOCSDIR%%/html/00CodingConventions.html >X%%PORTDOCS%%%%DOCSDIR%%/html/00INTRODUCTION.html >X%%PORTDOCS%%%%DOCSDIR%%/html/ApproxPts.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BigInt.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BigIntOps.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BigRat.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BigRatInterval.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BigRatOps.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BuildInfo.html >X%%PORTDOCS%%%%DOCSDIR%%/html/BuiltInFunctions.html >X%%PORTDOCS%%%%DOCSDIR%%/html/CanonicalHom.html >X%%PORTDOCS%%%%DOCSDIR%%/html/CpuTimeLimit.html >X%%PORTDOCS%%%%DOCSDIR%%/html/DenseMatrix.html 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>X%%PORTDOCS%%%%DOCSDIR%%/html/GPoly.html >X%%PORTDOCS%%%%DOCSDIR%%/html/GlobalManager.html >X%%PORTDOCS%%%%DOCSDIR%%/html/HomomorphismOps.html >X%%PORTDOCS%%%%DOCSDIR%%/html/INSTALL.html >X%%PORTDOCS%%%%DOCSDIR%%/html/IdealOfPoints.html >X%%PORTDOCS%%%%DOCSDIR%%/html/JBMill.html >X%%PORTDOCS%%%%DOCSDIR%%/html/LogStream.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MachineInt.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MatrixForOrdering.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MatrixOps.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MatrixSpecial.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MatrixView.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MemPool.html >X%%PORTDOCS%%%%DOCSDIR%%/html/ModuleTermOrdering.html >X%%PORTDOCS%%%%DOCSDIR%%/html/MorseGraph.html >X%%PORTDOCS%%%%DOCSDIR%%/html/NumTheory.html >X%%PORTDOCS%%%%DOCSDIR%%/html/OpenMath.html >X%%PORTDOCS%%%%DOCSDIR%%/html/OrdvArith.html >X%%PORTDOCS%%%%DOCSDIR%%/html/OrthogonalPolys.html >X%%PORTDOCS%%%%DOCSDIR%%/html/PBMill.html >X%%PORTDOCS%%%%DOCSDIR%%/html/PPMonoid.html 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>Xinclude/CoCoA/MemPool.H >Xinclude/CoCoA/ModuleOrdering.H >Xinclude/CoCoA/NumTheory-GCDFreeBasis.H >Xinclude/CoCoA/NumTheory-prime.H >Xinclude/CoCoA/NumTheory.H >Xinclude/CoCoA/OpenMath.H >Xinclude/CoCoA/OpenMathXML.H >Xinclude/CoCoA/OrdvArith.H >Xinclude/CoCoA/OrthogonalPolys.H >Xinclude/CoCoA/PPMonoid.H >Xinclude/CoCoA/PPMonoidEv.H >Xinclude/CoCoA/PPMonoidEvOv.H >Xinclude/CoCoA/PPMonoidHom.H >Xinclude/CoCoA/PPMonoidOv.H >Xinclude/CoCoA/PPMonoidSparse.H >Xinclude/CoCoA/PPOrdering.H >Xinclude/CoCoA/PPWithMask.H >Xinclude/CoCoA/PREPROCESSOR_DEFNS.H >Xinclude/CoCoA/PolyRing.H >Xinclude/CoCoA/ProgressReporter.H >Xinclude/CoCoA/QBGenerator.H >Xinclude/CoCoA/QuasiPoly.H >Xinclude/CoCoA/QuotientModule.H >Xinclude/CoCoA/QuotientRing.H >Xinclude/CoCoA/RandomSparseNonSing01Mat.H >Xinclude/CoCoA/ReductionCog.H >Xinclude/CoCoA/RingDenseUPolyClean.H >Xinclude/CoCoA/RingDistrMPolyClean.H >Xinclude/CoCoA/RingDistrMPolyInlFpPP.H >Xinclude/CoCoA/RingDistrMPolyInlPP.H >Xinclude/CoCoA/RingElemInput.H >Xinclude/CoCoA/RingExtAlg.H >Xinclude/CoCoA/RingFp.H >Xinclude/CoCoA/RingFpDouble.H >Xinclude/CoCoA/RingFpLog.H >Xinclude/CoCoA/RingFqLog.H >Xinclude/CoCoA/RingFqVec.H >Xinclude/CoCoA/RingHom.H >Xinclude/CoCoA/RingQQ.H >Xinclude/CoCoA/RingTwinFloat.H >Xinclude/CoCoA/RingWeyl.H >Xinclude/CoCoA/RingZZ.H >Xinclude/CoCoA/RootBound.H >Xinclude/CoCoA/SignalWatcher.H >Xinclude/CoCoA/SmallFpDoubleImpl.H >Xinclude/CoCoA/SmallFpImpl.H >Xinclude/CoCoA/SmallFpLogImpl.H >Xinclude/CoCoA/SmallFqLogImpl.H >Xinclude/CoCoA/SmallFqUtils.H >Xinclude/CoCoA/SmallFqVecImpl.H >Xinclude/CoCoA/SmartPtrIRC.H >Xinclude/CoCoA/SparsePolyIter.H >Xinclude/CoCoA/SparsePolyOps-EvalInterval.H >Xinclude/CoCoA/SparsePolyOps-IdealOfPoints.H >Xinclude/CoCoA/SparsePolyOps-MinPoly.H >Xinclude/CoCoA/SparsePolyOps-MonomialIdeal.H >Xinclude/CoCoA/SparsePolyOps-RadicalMembership.H >Xinclude/CoCoA/SparsePolyOps-RealRadical.H >Xinclude/CoCoA/SparsePolyOps-RingElem.H >Xinclude/CoCoA/SparsePolyOps-SturmSeq.H >Xinclude/CoCoA/SparsePolyOps-hilbert.H >Xinclude/CoCoA/SparsePolyOps-ideal.H >Xinclude/CoCoA/SparsePolyOps-implicit.H >Xinclude/CoCoA/SparsePolyOps-involutive.H >Xinclude/CoCoA/SparsePolyRing.H >Xinclude/CoCoA/SugarDegree.H >Xinclude/CoCoA/ThreadsafeCounter.H >Xinclude/CoCoA/TmpF5.H >Xinclude/CoCoA/TmpGOperations.H >Xinclude/CoCoA/TmpGPair.H >Xinclude/CoCoA/TmpGPoly.H >Xinclude/CoCoA/TmpGRStats.H >Xinclude/CoCoA/TmpGReductor.H >Xinclude/CoCoA/TmpGTypes.H >Xinclude/CoCoA/TmpIsTree.H >Xinclude/CoCoA/TmpJBAlgorithm.H >Xinclude/CoCoA/TmpJBDatastructure.H >Xinclude/CoCoA/TmpJBMill.H >Xinclude/CoCoA/TmpJBSets.H >Xinclude/CoCoA/TmpMayerVietorisTree.H >Xinclude/CoCoA/TmpMonomialFunctions.H >Xinclude/CoCoA/TmpMorseBetti.H >Xinclude/CoCoA/TmpMorseElement.H >Xinclude/CoCoA/TmpMorseGraph.H >Xinclude/CoCoA/TmpMorsePaths.H >Xinclude/CoCoA/TmpMorseResolution.H >Xinclude/CoCoA/TmpPBMill.H >Xinclude/CoCoA/TmpPPVector.H >Xinclude/CoCoA/TmpPartialMorseBetti.H >Xinclude/CoCoA/TmpResolutionMinimization.H >Xinclude/CoCoA/TmpStabilityAlgorithm.H >Xinclude/CoCoA/TmpToric.H >Xinclude/CoCoA/TmpUniversalInvolutiveBasisContainer.H >Xinclude/CoCoA/ToString.H >Xinclude/CoCoA/ULong2Long.H >Xinclude/CoCoA/UPoly.H >Xinclude/CoCoA/VectorOps.H >Xinclude/CoCoA/VerificationLevel.H >Xinclude/CoCoA/apply.H >Xinclude/CoCoA/assert.H >Xinclude/CoCoA/bool3.H >Xinclude/CoCoA/combinatorics.H >Xinclude/CoCoA/config.H >Xinclude/CoCoA/convert.H >Xinclude/CoCoA/debug_new.H >Xinclude/CoCoA/degree.H >Xinclude/CoCoA/error.H >Xinclude/CoCoA/exception.H >Xinclude/CoCoA/factor.H >Xinclude/CoCoA/factorization.H >Xinclude/CoCoA/geobucket.H >Xinclude/CoCoA/ideal.H >Xinclude/CoCoA/interrupt.H >Xinclude/CoCoA/library.H >Xinclude/CoCoA/matrix.H >Xinclude/CoCoA/module.H >Xinclude/CoCoA/obsolescent.H >Xinclude/CoCoA/random.H >Xinclude/CoCoA/ring.H >Xinclude/CoCoA/submodule.H >Xinclude/CoCoA/subresultant.H >Xinclude/CoCoA/symbol.H >Xinclude/CoCoA/time.H >Xinclude/CoCoA/utils-gmp.H >Xinclude/CoCoA/utils.H >Xinclude/CoCoA/verbose.H >Xlib/libcocoa.a >17501fbe558b8e37ba88877463df1c99 >echo x - cocoalib/Makefile >sed 's/^X//' >cocoalib/Makefile << '02df9e4c22f958ac096c630ab2b96c87' >X# Created by Lorenzo Salvadore >X# $FreeBSD$ >X >XPORTNAME= cocoalib >XDISTVERSION= 0.99600 >XCATEGORIES= math >XMASTER_SITES= http://cocoa.dima.unige.it/cocoalib/tgz/ >XDISTNAME= CoCoALib-0.99600 >X >XMAINTAINER= phascolarctos@protonmail.ch >XCOMMENT= C++ library for doing Computations in Commutative Algebra >X >XLICENSE= GPLv3+ GFDL PD >XLICENSE_COMB= multi >XLICENSE_FILE_GPL3+ = ${WRKSRC}/COPYING-GPLv3 >XLICENSE_FILE_GFDL= ${WRKSRC}/doc/COPYING >XLICENSE_DISTFILES_GPLv3+ = ${WRKSRC}/src ${WRKSRC}/include >XLICENSE_DISTFILES_GFDL= ${WRKSRC}/doc >XLICENSE_DISTFILES_PD= ${WRKSRC}/examples >X >XBUILD_DEPENDS= bash:shells/bash >XLIB_DEPENDS= libgmp.so:math/gmp >X >XFLAVORS= cocoa normaliz >XFLAVOR?= ${FLAVORS:[1]} >Xcocoa_PKGNAMESUFFIX= -cocoa >Xnormaliz_PKGNAMESUFFIX= -normaliz >X >XUSES+= shebangfix tar:tgz >X >XSHEBANG_GLOB= *.sh >X >XOPTIONS_DEFINE= DOCS EXAMPLES FROBBY GFAN \ >X GSL NORMALIZ SMALLDEG TEST >XFROBBY_DESC= Link with libfrobby.a >XGFAN_DESC= Link with libgfan.a >XGSL_DESC= Link with libgsl.a >XNORMALIZ_DESC= Link with libnormaliz.a (works only if FLAVOR=cocoa) >XSMALLDEG_DESC= Optimization for small degree polynomials >XBOOST_BUILD_DEPENDS= ${LOCALBASE}/include/boost/thread.hpp:devel/boost-libs >XCDD_BUILD_DEPENDS= ${LOCALBASE}/lib/libcddgmp.a:math/cddlib >XFROBBY_BUILD_DEPENDS= ${LOCALBASE}/lib/libfrobby.a:math/frobby >XFROBBY_CXXFLAGS= -DCoCoA_WITH_FROBBY >XFROBBY_LDFLAGS= -lfrobby >XGFAN_BUILD_DEPENDS= ${LOCALBASE}/lib/libgfan.a:math/gfanlib >XGFAN_CXXFLAGS= -DCoCoA_WITH_GFAN >XGFAN_LDFLAGS= -lgfan >XGSL_BUILD_DEPENDS= ${LOCALBASE}/lib/libgsl.a:math/gsl >XGSL_CXXFLAGS= -DCoCoA_WITH_GSL >XGSL_LDFLAGS= -lgsl -lgslcblas >X.if ${FLAVOR} == cocoa >XNORMALIZ_BUILD_DEPENDS= ${LOCALBASE}/lib/libnormaliz.a:math/libnormaliz@${FLAVOR} >XNORMALIZ_CXXFLAGS= -DCoCoA_WITH_NORMALIZ >XNORMALIZ_LDFLAGS= -lnormaliz >X.endif >X >XCXXFLAGS+= -I${WRKSRC}/include \ >X -I${WRKSRC}/src/AlgebraicCore/TmpFactorDir \ >X -I${WRKSRC}/src/AlgebraicCore/TmpFactorDir/multivariate \ >X -I${WRKSRC}/src/AlgebraicCore/TmpFactorDir/linalg \ >X -I${LOCALBASE}/include >XLDFLAGS+= -L${LOCALBASE}/lib -L${LIBDIR} -lcocoa -lgmp >X >XCOCOALIB_VERSION= DISTVERSION >XPLIST_SUB+= COCOALIB_VERSION=${COCOALIB_VERSION} >X >XLIBDIR= ${WRKSRC}/src/AlgebraicCore >XTESTDIR= ${WRKSRC}/src/tests >XLIBRARY_NAMES= cd ${LIBDIR} && ${FIND} . \( -name "*.c" -o -name "*.C" \) \ >X -a ! -name "BuildInfo.C" \ >X -a ! -name "debug_new.C" \ >X -a ! -name "leak_checker.C" \ >X -a ! -name "DUPI.c" \ >X -a ! -name "DUPI_DUPFF.c" \ >X -a ! -name "DUPIprint.c" \ >X -a ! -name "DUPIsubtract_product.c" \ >X -a ! -name "DUPZpadic_expand.c" \ >X -a ! -name "Qdet.c" \ >X -a ! -name "DMPFF.c" \ >X -a ! -name "DMPFFfactor.c" \ >X -a ! -name "DMPFFgcd.c" \ >X -a ! -name "DMPFFlift.c" \ >X -a ! -name "DMPFFlist.c" \ >X -a ! -name "DMPFFsort.c" \ >X -a ! -name "DUPFFbivariate_lift3.c" \ >X | cut -b 3- | ${SED} 's,.C$$,.o,' | ${SED} 's,.c$$,.o,' | ${SORT} >XTEST_NAMES= cd ${TESTDIR} && ${FIND} . -name "*.C" \ >X -a ! -name "test-Dynamic1.C" \ >X -a ! -name "test-F5.C" \ >X -a ! -name "test-JBMill.C" \ >X -a ! -name "test-OpenMath2.C" \ >X -a ! -name "test-PBMill.C" \ >X -a ! -name "test-RingTwinFloat3.C" \ >X -a ! -name "test-TmpPartialMorseBetti.C" \ >X -a ! -name "test-implicit1.C" \ >X -a ! -name "test-implicit2.C" \ >X -a ! -name "test-implicit3.C" \ >X | cut -b 3- | ${SED} 's,.C$$,,' | ${SED} 's,.c$$,,' | ${SORT} >X >XHEADERSDIR=${PREFIX}/include/CoCoA >X >Xpost-patch: >X ${ECHO_CMD} "all: BuildInfo.o $$(${ECHO_CMD} "$$(${LIBRARY_NAMES})" | ${TR} '\n' ' ')" > ${LIBDIR}/Makefile >X ${ECHO_CMD} -e '\tar rcs libcocoa.a $${.ALLSRC}' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} >> ${LIBDIR}/Makefile >X ${ECHO_CMD} '.SUFFIXES:.o' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} '.c.o:' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} -e '\t${CXX} ${CXXFLAGS} -o $${.TARGET} -c $${.IMPSRC}' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} '.C.o:' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} -e '\t${CXX} ${CXXFLAGS} -o $${.TARGET} -c $${.IMPSRC}' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} 'BuildInfo.o:' >> ${LIBDIR}/Makefile >X ${ECHO_CMD} -e '\t${CXX} ${CXXFLAGS} -DCOCOA_VERSION="\"${DISTVERSION}\"" -DCOCOA_CXX="\"${CXX}\"" -DCOCOA_CXXFLAGS="\"${CXXFLAGS}\"" -DCOCOA_CXXFLAGS_DEFINES="\"\"" -o BuildInfo.o -c BuildInfo.C' >> ${LIBDIR}/Makefile >X >Xpost-patch-SMALLDEG-on: >X ${REINPLACE_CMD} 's,int SmallExponent_t,short SmallExponent_t,' ${WRKSRC}/include/CoCoA/config.H >X >Xpost-patch-TEST-on: >X ${ECHO_CMD} "all: $$(${ECHO_CMD} "$$(${TEST_NAMES})" | ${TR} '\n' ' ')" > ${TESTDIR}/Makefile >X ${ECHO_CMD} -e '\tbash RunTests.sh $${.ALLSRC}' >> ${TESTDIR}/Makefile >X ${ECHO_CMD} >> ${TESTDIR}/Makefile >X ${ECHO_CMD} '.C:' >> ${TESTDIR}/Makefile >X ${ECHO_CMD} -e '\t${CXX} ${CXXFLAGS} -o $${.TARGET} $${.IMPSRC} ${LDFLAGS}' >> ${TESTDIR}/Makefile >X >Xdo-build: >X cd ${WRKSRC}/include/CoCoA && ./MakeUnifiedHeader.sh --check >X cd ${LIBDIR} && ${MAKE_CMD} >X >Xpost-build-TEST-on: >X cd ${TESTDIR} && ${MAKE_CMD} >X >Xdo-install: >X ${INSTALL_DATA} ${LIBDIR}/libcocoa.a ${STAGEDIR}${PREFIX}/lib >X ${MKDIR} ${STAGEDIR}${HEADERSDIR} >X cd ${WRKSRC}/include/CoCoA && ${COPYTREE_SHARE} . ${STAGEDIR}${HEADERSDIR} '-name *\.H' >X >Xpost-install-DOCS-on: >X ${MKDIR} ${STAGEDIR}${DOCSDIR} >X ${MKDIR} ${STAGEDIR}${DOCSDIR}/html >X ${INSTALL_MAN} ${WRKSRC}/doc/CoCoALib.pdf ${STAGEDIR}${DOCSDIR} >X cd ${WRKSRC}/doc/html && ${COPYTREE_SHARE} . ${STAGEDIR}${DOCSDIR}/html >X >Xpost-install-EXAMPLES-on: >X ${MKDIR} ${STAGEDIR}${EXAMPLESDIR} >X ${INSTALL_MAN} ${WRKSRC}/examples/index.html ${STAGEDIR}${EXAMPLESDIR} >X cd ${WRKSRC}/examples && ${COPYTREE_SHARE} . ${STAGEDIR}${EXAMPLESDIR} '-name ex-*\.C' >X >X.include <bsd.port.mk> >02df9e4c22f958ac096c630ab2b96c87 >echo c - cocoalib/files >mkdir -p cocoalib/files > /dev/null 2>&1 >echo x - cocoalib/files/patch-src_AlgebraicCore_TmpLDP.C >sed 's/^X//' >cocoalib/files/patch-src_AlgebraicCore_TmpLDP.C << '05e24cab5311507f4f37aad0d3230e9e' >X--- src/AlgebraicCore/TmpLDP.C.orig 2018-08-28 05:34:27 UTC >X+++ src/AlgebraicCore/TmpLDP.C >X@@ -11,6 +11,7 @@ >X #include "CoCoA/QBGenerator.H" >X #include "CoCoA/RingHom.H" >X #include "CoCoA/SparsePolyRing.H" >X+#include "CoCoA/SparsePolyOps-RingElem.H" >X #include "CoCoA/convert.H" >X #include "CoCoA/matrix.H" >X #include "CoCoA/ring.H" >05e24cab5311507f4f37aad0d3230e9e >echo x - cocoalib/pkg-descr >sed 's/^X//' >cocoalib/pkg-descr << '96be943adead5bb07ee11ef29ae477ed' >XCoCoALib is a C++ library for Computations in Commutative Algebra, >Xfocused mainly on polynomial rings, ideals, Groebner basis and >Xsimilar topics. >X >XYou might like to install CoCoA-5 too, a shell that lets you interact >Xwith most of CoCoALib without the need to learn C++. >X >XWWW: http://cocoa.dima.unige.it >96be943adead5bb07ee11ef29ae477ed >exit >
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