Attachment 19929 Details for Bug 35298 – file.shar

file.shar

file.shar (text/plain), 27.49 KB, created by Tony Maher on 2002-02-25 03:00:02 UTC

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Description:

Filename:

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Creator: Tony Maher

Created: 2002-02-25 03:00:02 UTC

Size: 27.49 KB

patch

obsolete

># This is a shell archive.  Save it in a file, remove anything before
># this line, and then unpack it by entering "sh file".  Note, it may
># create directories; files and directories will be owned by you and
># have default permissions.
>#
># This archive contains:
>#
>#	primer3
>#	primer3/pkg-descr
>#	primer3/distinfo
>#	primer3/Makefile
>#	primer3/pkg-comment
>#	primer3/pkg-plist
>#
>echo c - primer3
>mkdir -p primer3 > /dev/null 2>&1
>echo x - primer3/pkg-descr
>sed 's/^X//' >primer3/pkg-descr << 'END-of-primer3/pkg-descr'
>X"Primer3 is a complete rewrite of the original PRIMER program
>X(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
>XLander.  See DIFFERENCES FROM EARLIER VERSIONS for a discussion
>Xof how Primer3 differs from its predecessors, Primer 0.5 and
>XPrimer v2.
>X
>XPrimer3 picks primers for PCR reactions, considering as criteria:
>X
>Xo oligonucleotide melting temperature, size, GC content,
>X  and primer-dimer possibilities,
>Xo PCR product size,
>Xo positional constraints within the source sequence, and
>Xo miscellaneous other constraints.
>X
>XAll of these criteria are user-specifiable as constraints, and
>Xsome are specifiable as terms in an objective function that
>Xcharacterizes an optimal primer pair."
>X- from the README file
>X
>XWWW: http://www-genome.wi.mit.edu/genome_software/other/primer3.html
>X
>X--
>XTony Maher <tonym@biolateral.com.au>
>END-of-primer3/pkg-descr
>Echo x - primer3/distinfo
>sed 's/^X//' >primer3/distinfo << 'END-of-primer3/distinfo'
>XMD5 (primer3_0_9_test.tar.gz) = 1ae09013c982eb67953cc4dd5b837088
>END-of-primer3/distinfo
>echo x - primer3/Makefile
>sed 's/^X//' >primer3/Makefile << 'END-of-primer3/Makefile'
>X# New ports collection makefile for:	primer3
>X# Date created:				25 February 2002
>X# Whom:					Tony Maher <tonym@biolateral.com.au>
>X#
>X# $FreeBSD$
>X#
>X
>XPORTNAME=	primer3
>XPORTVERSION=	0.9
>XCATEGORIES=	biology
>XMASTER_SITES=	http://www-genome.wi.mit.edu/ftp/distribution/software/
>XDISTNAME=	${PORTNAME}_0_9_test
>X
>XMAINTAINER=	tonym@biolateral.com.au
>X
>XWRKSRC=		${WRKDIR}/${DISTNAME}/src
>X
>XCPIO=		cpio --quiet -pdum -R
>XDOCUMENTS=	README example
>XCGI-EXAMPLES=	primer3_www.cgi		primer3_www_help.html \
>X		primer3_www_results.cgi	primer3_www_results_help.html
>X
>Xpre-configure:
>X	@${PERL} -pi.orig \
>X		-e 's#^CFLAGS.*#CFLAGS  += \$$$CC_OPTS$#;' \
>X		-e 's#CC_OPTS = -g#CC_OPTS =#;' \
>X		-e 's#LDFLAGS = -g#LDFLAGS ?=#;' \
>X		-e 's#^WHITEHEAD_SPECIFIC_HACK.*##;' \
>X		${WRKDIR}/${DISTNAME}/src/Makefile
>X
>Xdo-install:
>X	@${INSTALL_PROGRAM} ${WRKSRC}/primer3_core ${PREFIX}/bin/primer3
>X	@${MKDIR} ${DATADIR}
>X	@${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/Copyright ${DATADIR}
>X.for file in ${CGI-EXAMPLES}
>X	@${INSTALL_DATA} ${WRKSRC}/${file} ${DATADIR}
>X.endfor
>X.if !defined(NOPORTDOCS)
>X	@${MKDIR} ${DOCSDIR}
>X.for file in ${DOCUMENTS}
>X	@${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/${file} ${DOCSDIR}
>X.endfor
>X	@${MKDIR} ${EXAMPLESDIR}
>X	@cd ${WRKDIR}/${DISTNAME}/test && find * | \
>X		${CPIO} ${SHAREOWN}:${SHAREGRP} ${EXAMPLESDIR}
>X.endif
>X
>Xpost-install:
>X	@${CAT} ${DATADIR}/Copyright
>X
>X.include <bsd.port.mk>
>END-of-primer3/Makefile
>echo x - primer3/pkg-comment
>sed 's/^X//' >primer3/pkg-comment << 'END-of-primer3/pkg-comment'
>XPrimer3 helps to choose primers for PCR reactions
>END-of-primer3/pkg-comment
>echo x - primer3/pkg-plist
>sed 's/^X//' >primer3/pkg-plist << 'END-of-primer3/pkg-plist'
>X%%PORTDOCS%%share/doc/primer3/README
>X%%PORTDOCS%%share/doc/primer3/example
>X%%PORTDOCS%%share/examples/primer3/dpal_gen.pl
>X%%PORTDOCS%%share/examples/primer3/dpal_input
>X%%PORTDOCS%%share/examples/primer3/dpal_long_input
>X%%PORTDOCS%%share/examples/primer3/dpal_long_score_output
>X%%PORTDOCS%%share/examples/primer3/dpal_output
>X%%PORTDOCS%%share/examples/primer3/dpal_score_output
>X%%PORTDOCS%%share/examples/primer3/dpal_test.pl
>X%%PORTDOCS%%share/examples/primer3/long_seq_input
>X%%PORTDOCS%%share/examples/primer3/long_seq_output
>X%%PORTDOCS%%share/examples/primer3/not_for_production.lib
>X%%PORTDOCS%%share/examples/primer3/primer1_input
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/AGAG.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/AGAG.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-02.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-02.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-03.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-03.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-06.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-06.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-19.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-19.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-21.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP01-21.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP04-07.txt.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/SP04-07.txt.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.int
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/long_seq.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/included_test_w_middle.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/long_seq.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/targets_test.for
>X%%PORTDOCS%%share/examples/primer3/primer1_list_last/targets_test.rev
>X%%PORTDOCS%%share/examples/primer3/primer1_output
>X%%PORTDOCS%%share/examples/primer3/primer_boundary1_formated_output
>X%%PORTDOCS%%share/examples/primer3/primer_boundary1_input
>X%%PORTDOCS%%share/examples/primer3/primer_boundary1_output
>X%%PORTDOCS%%share/examples/primer3/primer_boundary_formated_output
>X%%PORTDOCS%%share/examples/primer3/primer_boundary_input
>X%%PORTDOCS%%share/examples/primer3/primer_boundary_output
>X%%PORTDOCS%%share/examples/primer3/primer_check_input
>X%%PORTDOCS%%share/examples/primer3/primer_check_output
>X%%PORTDOCS%%share/examples/primer3/primer_end_pathology_input
>X%%PORTDOCS%%share/examples/primer3/primer_end_pathology_output
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/MAX_PRIMER_LENGTH.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_dna_conc.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_4.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_4.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_salt_conc.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_product_size.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/gc_clamp_min_size.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/incorrect_task.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/io_gc_content_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/io_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_limit_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/mishyb_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/mispr_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no=.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no_terminal=.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size_int.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/pair_mispr.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/pr_gc_content_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/product_size_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/product_tm_obj_fn.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err4.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err5.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err6.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err4.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err5.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err6.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality1.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality2.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality3.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality4.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/too_many_product_sizes.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_min_size.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_num_return.in
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/MAX_PRIMER_LENGTH.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_dna_conc.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_4.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_4.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_salt_conc.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_any_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_self_end_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/empty_product_size.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/gc_clamp_min_size.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/incorrect_task.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/io_gc_content_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/io_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_min_tm_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_opt_tm_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_limit_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/mishyb_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/mispr_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no=.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no_terminal=.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_min_size_int.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/pair_mispr.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/pr_gc_content_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/product_size_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/product_tm_obj_fn.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err4.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err5.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_err6.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err4.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err5.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/repeat_lib_int_err6.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality1.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality2.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality3.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality4.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/too_many_product_sizes.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_min_size.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_num_return.out
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/MAX_PRIMER_LENGTH.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_1.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_dna_conc.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_1.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_2.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_3.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_float_4.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_2.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_3.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_1.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_2.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_gc_int_3.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_num_ns_int.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_1.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_2.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_3.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_product_sizes_4.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/bad_salt_conc.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/max_size_min_product_int.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/min_opt_tm.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_global_err/mispr_obj_fn.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no=.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/no_terminal=.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size.out2
>X%%PORTDOCS%%share/examples/primer3/primer_global_err/opt_max_size_int.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_global_err/pair_mispr.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_global_err/seq_quality4.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_global_err/zero_num_return.out2
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>X%%PORTDOCS%%share/examples/primer3/primer_mispriming_input
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>X%%PORTDOCS%%share/examples/primer3/primer_rat_input
>X%%PORTDOCS%%share/examples/primer3/primer_rat_output
>X%%PORTDOCS%%share/examples/primer3/primer_repeat_boundary1_lib
>X%%PORTDOCS%%share/examples/primer3/primer_repeat_boundary2_lib
>X%%PORTDOCS%%share/examples/primer3/primer_repeat_long_lib
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>X%%PORTDOCS%%share/examples/primer3/primer_syntax_input
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>X%%PORTDOCS%%share/examples/primer3/primer_task_input
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>X%%PORTDOCS%%share/examples/primer3/repeat_lib3
>X%%PORTDOCS%%share/examples/primer3/repeat_lib4
>X%%PORTDOCS%%share/examples/primer3/repeat_lib5
>X%%PORTDOCS%%share/examples/primer3/repeat_lib6
>Xbin/primer3
>Xshare/primer3/Copyright
>Xshare/primer3/primer3_www.cgi
>Xshare/primer3/primer3_www_help.html
>Xshare/primer3/primer3_www_results.cgi
>Xshare/primer3/primer3_www_results_help.html
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>X%%PORTDOCS%%@dirrm share/examples/primer3/primer1_list_tmp
>X%%PORTDOCS%%@dirrm share/examples/primer3/primer_global_err
>X%%PORTDOCS%%@dirrm share/examples/primer3/primer_list_last
>X%%PORTDOCS%%@dirrm share/examples/primer3/primer_list_tmp
>X%%PORTDOCS%%@dirrm share/examples/primer3/
>END-of-primer3/pkg-plist
>exit

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