Attachment 213322 Details for Bug 245561 – patch

[patch] patch

yuri_ports.patch (text/plain), 17.50 KB, created by Danilo Egea Gondolfo on 2020-04-12 09:49:28 UTC

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Creator: Danilo Egea Gondolfo

Created: 2020-04-12 09:49:28 UTC

Size: 17.50 KB

patch

obsolete

>Index: biology/hhsuite/Makefile
>===================================================================
>--- biology/hhsuite/Makefile	(revision 531483)
>+++ biology/hhsuite/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	hhsuite
> DISTVERSIONPREFIX=	v
> DISTVERSION=	3.2.0
>-PORTREVISION=	3
>+PORTREVISION=	4
> CATEGORIES=	biology science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,8 +12,7 @@
> LICENSE=	GPLv3
> LICENSE_FILE=	${WRKSRC}/LICENSE
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi
>-RUN_DEPENDS=	openmpi>0:net/openmpi
>+LIB_DEPENDS=	libmpi.so:net/openmpi3
> 
> USES=		cmake compiler:c++11-lang perl5 python shebangfix
> SHEBANG_GLOB=	*.pl *.py
>@@ -21,7 +20,7 @@
> GH_ACCOUNT=	soedinglab
> GH_PROJECT=	hh-suite
> 
>-LDFLAGS+=	-Wl,-rpath,${LOCALBASE}/mpi/openmpi/lib -L${LOCALBASE}/mpi/openmpi/lib -lmpi # force linking to openmpi, and not to mpich
>+LDFLAGS+=	-Wl,-rpath,${LOCALBASE}/mpi/openmpi3/lib -L${LOCALBASE}/mpi/openmpi3/lib -lmpi # force linking to openmpi, and not to mpich
> 
> .include <bsd.port.options.mk>
> 
>Index: math/deal.ii/Makefile
>===================================================================
>--- math/deal.ii/Makefile	(revision 531483)
>+++ math/deal.ii/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	deal.II
> DISTVERSIONPREFIX=	v
> DISTVERSION=	9.1.1
>-PORTREVISION=	8
>+PORTREVISION=	9
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -57,7 +57,7 @@
> MPI_CMAKE_BOOL=		DEAL_II_WITH_MPI
> MPI_CMAKE_ON=		-DMPI_LINKER_FLAGS:STRING="${LDFLAGS}"
> MPI_LIB_DEPENDS=	libboost_iostreams.so:devel/boost-libs \
>-			libmpi.so:net/openmpi
>+			libmpi.so:net/openmpi3
> MPI_BROKEN=		Could not find any suitable mpi library! (need to investigate)
> 
> NETCDF_DESC=		Compile with Netcdf (only with MPI)
>Index: math/dune-alugrid/Makefile
>===================================================================
>--- math/dune-alugrid/Makefile	(revision 531483)
>+++ math/dune-alugrid/Makefile	(working copy)
>@@ -3,6 +3,7 @@
> PORTNAME=	dune-alugrid
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.6.0
>+PORTREVISION=	1
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -16,7 +17,7 @@
> 		libdunegeometry.so:math/dune-geometry \
> 		libdunegrid.so:math/dune-grid \
> 		libmetis.so:math/metis \
>-		libmpi.so:net/openmpi
>+		libmpi.so:net/openmpi3
> 
> USES=		cmake compiler:c++17-lang fortran pkgconfig
> USE_GITLAB=	yes
>Index: math/dune-common/Makefile
>===================================================================
>--- math/dune-common/Makefile	(revision 531483)
>+++ math/dune-common/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	dune-common
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.7.0
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,7 +12,7 @@
> LICENSE=	GPLv2
> LICENSE_FILE=	${WRKSRC}/LICENSE.md
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi \
>+BUILD_DEPENDS=	openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> LIB_DEPENDS=	libopenblas.so:math/openblas \
> 		libtbb.so:devel/tbb
>Index: math/dune-geometry/Makefile
>===================================================================
>--- math/dune-geometry/Makefile	(revision 531483)
>+++ math/dune-geometry/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	dune-geometry
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.7.0
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,7 +12,7 @@
> LICENSE=	GPLv2
> LICENSE_FILE=	${WRKSRC}/LICENSE.md
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi \
>+BUILD_DEPENDS=	openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> LIB_DEPENDS=	libdunecommon.so:math/dune-common \
> 		libopenblas.so:math/openblas \
>Index: math/dune-grid/Makefile
>===================================================================
>--- math/dune-grid/Makefile	(revision 531483)
>+++ math/dune-grid/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	dune-grid
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.7.0rc2
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,7 +12,7 @@
> LICENSE=	GPLv2
> LICENSE_FILE=	${WRKSRC}/LICENSE.md
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi \
>+BUILD_DEPENDS=	openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> LIB_DEPENDS=	libdunecommon.so:math/dune-common \
> 		libdunegeometry.so:math/dune-geometry \
>Index: math/dune-spgrid/Makefile
>===================================================================
>--- math/dune-spgrid/Makefile	(revision 531483)
>+++ math/dune-spgrid/Makefile	(working copy)
>@@ -3,6 +3,7 @@
> PORTNAME=	dune-spgrid
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.6.0rc1.20200105
>+PORTREVISION=	1
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -15,7 +16,7 @@
> 		dune-grid>0:math/dune-grid \
> 		dune-geometry>0:math/dune-geometry
> BUILD_DEPENDS=	${DUNE_DEPENDS} \
>-		openmpi>0:net/openmpi \
>+		openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> RUN_DEPENDS=	${DUNE_DEPENDS}
> 
>Index: math/dune-typetree/Makefile
>===================================================================
>--- math/dune-typetree/Makefile	(revision 531483)
>+++ math/dune-typetree/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	dune-typetree
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.7.0rc2
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -13,10 +13,10 @@
> LICENSE_FILE=	${WRKSRC}/LICENSE.md
> 
> BUILD_DEPENDS=	dune-common>0:math/dune-common \
>-		openmpi>0:net/openmpi \
>+		openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> RUN_DEPENDS=	dune-common>0:math/dune-common \
>-		openmpi>0:net/openmpi \
>+		openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> 
> USES=		cmake compiler:c++17-lang fortran pkgconfig
>Index: math/dune-uggrid/Makefile
>===================================================================
>--- math/dune-uggrid/Makefile	(revision 531483)
>+++ math/dune-uggrid/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	dune-uggrid
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.7.0rc2
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,12 +12,12 @@
> LICENSE=	LGPL21
> LICENSE_FILE=	${WRKSRC}/COPYING.LGPL-2.1
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi \
>+BUILD_DEPENDS=	openmpi3>0:net/openmpi3 \
> 		vc>0:devel/vc
> LIB_DEPENDS=	libdunecommon.so:math/dune-common \
> 		libopenblas.so:math/openblas \
> 		libtbb.so:devel/tbb
>-RUN_DEPENDS=	openmpi>0:net/openmpi
>+RUN_DEPENDS=	openmpi3>0:net/openmpi3
> 
> USES=		cmake compiler:c++17-lang fortran pkgconfig python
> USE_GITLAB=	yes
>Index: math/mathgl/Makefile
>===================================================================
>--- math/mathgl/Makefile	(revision 531483)
>+++ math/mathgl/Makefile	(working copy)
>@@ -2,7 +2,7 @@
> 
> PORTNAME=	mathgl
> DISTVERSION=	2.4.4
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	math graphics
> MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION}/
> 
>@@ -55,7 +55,7 @@
> 			${PYNUMPY}
> PYTHON_RUN_DEPENDS=	${PYNUMPY}
> MPI_CMAKE_BOOL=		enable-mpi
>-MPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>+MPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
> 
> QT5_CMAKE_BOOL=		enable-qt5
> QT5_USE=		QT=core,gui,opengl,printsupport,widgets,buildtools_build,qmake_build
>Index: math/moab/Makefile
>===================================================================
>--- math/moab/Makefile	(revision 531483)
>+++ math/moab/Makefile	(working copy)
>@@ -2,6 +2,7 @@
> 
> PORTNAME=	moab
> DISTVERSION=	5.1.1
>+PORTREVISION=	1
> CATEGORIES=	math
> MASTER_SITES=	https://bitbucket.org/${BB_ACCOUNT}/${BB_PROJECT}/get/${BB_COMMIT}.tar.gz?dummy=/
> 
>@@ -18,7 +19,8 @@
> USES=		cmake:noninja compiler:c++11-lang eigen:3 fortran
> USE_LDCONFIG=	yes
> 
>-CMAKE_ARGS=	-DBLAS_LIBRARIES:STRING=${LOCALBASE}/lib/libopenblas.so -DLAPACK_LIBRARIES:STRING=${LOCALBASE}/lib/libopenblas.so
>+CMAKE_ARGS=	-DBLAS_LIBRARIES:STRING=${LOCALBASE}/lib/libopenblas.so \
>+		-DLAPACK_LIBRARIES:STRING=${LOCALBASE}/lib/libopenblas.so
> 
> BB_ACCOUNT=	fathomteam
> BB_PROJECT=	${PORTNAME}
>@@ -31,6 +33,6 @@
> OPTIONS_SUB=		yes
> 
> MPI_CMAKE_BOOL=		ENABLE_MPI
>-MPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>+MPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
> 
> .include <bsd.port.mk>
>Index: math/vtk8/Makefile
>===================================================================
>--- math/vtk8/Makefile	(revision 531483)
>+++ math/vtk8/Makefile	(working copy)
>@@ -2,7 +2,7 @@
> 
> PORTNAME=	vtk
> DISTVERSION=	8.1.2
>-PORTREVISION=	5
>+PORTREVISION=	6
> CATEGORIES=	math graphics
> MASTER_SITES=	http://www.vtk.org/files/release/${VTK_SHORT_VER}/
> PKGNAMESUFFIX=	8
>@@ -71,8 +71,8 @@
> DESIGNER_USE=		QT=designer
> DESIGNER_IMPLIES=	QT5
> 
>-MPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>-MPI_CMAKE_ON=		-DMPIEXEC=${LOCALBASE}/mpi/openmpi/bin/mpiexec
>+MPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
>+MPI_CMAKE_ON=		-DMPIEXEC=${LOCALBASE}/mpi/openmpi3/bin/mpiexec
> 
> OSMESA_CMAKE_ARGS=	-DVTK_OPENGL_HAS_OSMESA:BOOL=ON \
> 			-DOSMESA_INCLUDE_DIR:PATH=${LOCALBASE}/include/Mesa \
>Index: misc/adios2/Makefile
>===================================================================
>--- misc/adios2/Makefile	(revision 531483)
>+++ misc/adios2/Makefile	(working copy)
>@@ -3,6 +3,7 @@
> PORTNAME=	adios2
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.5.0
>+PORTREVISION=	1
> CATEGORIES=	misc science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -16,7 +17,7 @@
> 		libepoll-shim.so:devel/libepoll-shim \
> 		libfabric.so:net/libfabric \
> 		libffi.so:devel/libffi \
>-		libmpi.so:net/openmpi \
>+		libmpi.so:net/openmpi3 \
> 		libpng.so:graphics/png \
> 		libzfp.so:devel/zfp
> RUN_DEPENDS=	bash:shells/bash
>Index: net/aluminum/Makefile
>===================================================================
>--- net/aluminum/Makefile	(revision 531483)
>+++ net/aluminum/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	Aluminum
> DISTVERSIONPREFIX=	v
> DISTVERSION=	0.3.3
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	net
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -12,7 +12,7 @@
> LICENSE=	APACHE20
> 
> LIB_DEPENDS=	libhwloc.so:devel/hwloc \
>-		libmpi.so:net/openmpi
>+		libmpi.so:net/openmpi3
> 
> USES=		cmake
> USE_GITHUB=	yes
>Index: science/chrono/Makefile
>===================================================================
>--- science/chrono/Makefile	(revision 531483)
>+++ science/chrono/Makefile	(working copy)
>@@ -2,7 +2,7 @@
> 
> PORTNAME=	chrono
> DISTVERSION=	5.0.1
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	science devel
> PKGNAMESUFFIX=	-physics-simulation-engine
> 
>@@ -14,7 +14,7 @@
> 
> BROKEN_i386=	use of overloaded operator '[]' is ambiguous (with operand types 'chrono::quaternion' and 'int'): https://github.com/projectchrono/chrono/issues/158
> 
>-BUILD_DEPENDS=	openmpi>0:net/openmpi
>+BUILD_DEPENDS=	openmpi3>0:net/openmpi3
> 
> USES=		cmake compiler:c++14-lang eigen:3 fortran
> USE_GITHUB=	yes
>Index: science/gromacs/Makefile
>===================================================================
>--- science/gromacs/Makefile	(revision 531483)
>+++ science/gromacs/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> 
> PORTNAME=	gromacs
> DISTVERSION=	2020.1
>-PORTREVISION=	2
>+PORTREVISION=	3
> CATEGORIES=	science
> MASTER_SITES=	ftp://ftp.gromacs.org/pub/gromacs/
> 
>@@ -71,10 +71,10 @@
> 			-DMPI_C_COMPILER:FILEPATH="${LOCALBASE}/bin/mpicc"
> MPICH_PLIST_SUB=	SUFFIX_MPI="_mpi"
> 
>-OPENMPI_BUILD_DEPENDS=	openmpi>0:net/openmpi
>-OPENMPI_RUN_DEPENDS=	openmpi>0:net/openmpi
>+OPENMPI_BUILD_DEPENDS=	openmpi3>0:net/openmpi3
>+OPENMPI_RUN_DEPENDS=	openmpi3>0:net/openmpi3
> OPENMPI_CMAKE_ON=	-DGMX_MPI:BOOL=ON \
>-			-DMPI_C_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi/bin/mpicc"
>+			-DMPI_C_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi3/bin/mpicc"
> OPENMPI_PLIST_SUB=	SUFFIX_MPI="_mpi"
> 
> THREAD_MPI_DESC=	Build a thread-MPI-based multithreaded version of GROMACS
>Index: science/gromacs/pkg-plist
>===================================================================
>--- science/gromacs/pkg-plist	(revision 531483)
>+++ science/gromacs/pkg-plist	(working copy)
>@@ -28,20 +28,20 @@
> include/gromacs/utility/current_function.h
> include/gromacs/utility/gmxassert.h
> include/gromacs/utility/real.h
>-lib/libgmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%.so
>-lib/libgmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%.so.0
>-lib/libgmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%.so.0.1.0
>+lib/libgmxapi.so
>+lib/libgmxapi.so.0
>+lib/libgmxapi.so.0.1.0
> lib/libgromacs%%SUFFIX_MPI%%%%SUFFIX_D%%.so
> lib/libgromacs%%SUFFIX_MPI%%%%SUFFIX_D%%.so.5
> lib/libgromacs%%SUFFIX_MPI%%%%SUFFIX_D%%.so.5.0.0
> libdata/pkgconfig/libgromacs%%SUFFIX_MPI%%%%SUFFIX_D%%.pc
>-share/cmake/gmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%/gmxapi-config-version.cmake
>-share/cmake/gmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%/gmxapi-config.cmake
>-share/cmake/gmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%/gmxapi-%%CMAKE_BUILD_TYPE%%.cmake
>-share/cmake/gmxapi%%SUFFIX_MPI%%%%SUFFIX_D%%/gmxapi.cmake
>+share/cmake/gmxapi/gmxapi-config-version.cmake
>+share/cmake/gmxapi/gmxapi-config.cmake
>+share/cmake/gmxapi/gmxapi-%%CMAKE_BUILD_TYPE%%.cmake
>+share/cmake/gmxapi/gmxapi.cmake
> share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%-config-version.cmake
> share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%-config.cmake
>-share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%-toolchain.cmake
>+share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/gromacs-toolchain%%SUFFIX_MPI%%%%SUFFIX_D%%.cmake
> share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/libgromacs-%%CMAKE_BUILD_TYPE%%.cmake
> share/cmake/gromacs%%SUFFIX_MPI%%%%SUFFIX_D%%/libgromacs.cmake
> %%DATADIR%%/COPYING
>Index: science/hypre/Makefile
>===================================================================
>--- science/hypre/Makefile	(revision 531483)
>+++ science/hypre/Makefile	(working copy)
>@@ -4,7 +4,7 @@
> PORTNAME=	hypre
> DISTVERSIONPREFIX=	v
> DISTVERSION=	2.18.2
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -42,11 +42,11 @@
> MPICH_CONFIGURE_ENV=	CC=${LOCALBASE}/bin/mpicc CXX=${LOCALBASE}/bin/mpicxx
> MPICH_CONFIGURE_WITH=	MPI-include=${LOCALBASE}/include \
> 			MPI-lib-dirs=${LOCALBASE}/lib
>-OPENMPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>-OPENMPI_CONFIGURE_ENV=	CC=${LOCALBASE}/mpi/openmpi/bin/mpicc \
>-			CXX=${LOCALBASE}/mpi/openmpi/bin/mpicxx
>-OPENMPI_CONFIGURE_WITH=	MPI-include=${LOCALBASE}/mpi/openmpi/include \
>-			MPI-lib-dirs=${LOCALBASE}/mpi/openmpi/lib
>+OPENMPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
>+OPENMPI_CONFIGURE_ENV=	CC=${LOCALBASE}/mpi/openmpi3/bin/mpicc \
>+			CXX=${LOCALBASE}/mpi/openmpi3/bin/mpicxx
>+OPENMPI_CONFIGURE_WITH=	MPI-include=${LOCALBASE}/mpi/openmpi3/include \
>+			MPI-lib-dirs=${LOCALBASE}/mpi/openmpi3/lib
> 
> TEST_TARGET=	check
> 
>Index: science/lammps/Makefile
>===================================================================
>--- science/lammps/Makefile	(revision 531483)
>+++ science/lammps/Makefile	(working copy)
>@@ -2,7 +2,7 @@
> 
> PORTNAME=	lammps
> PORTVERSION=	${GH_TAGNAME:C/(stable|patch)_([0-9]{1,2})([A-Z][a-z][a-z])([0-9]{4})/\4.\3.\2/S/Jan/01/S/Feb/02/S/Mar/03/S/Apr/04/S/May/05/S/Jun/06/S/Jul/07/S/Aug/08/S/Sep/09/S/Oct/10/S/Nov/11/S/Dec/12/}
>-PORTREVISION=	1
>+PORTREVISION=	2
> CATEGORIES=	science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -33,7 +33,7 @@
> PARALLEL_DESC=		Enable parallelizations:
> 
> MPI_CMAKE_BOOL=		BUILD_MPI
>-MPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>+MPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
> MPI_USES=		compiler:c11
> 
> FFMPEG_BUILD_DEPENDS=	ffmpeg:multimedia/ffmpeg
>Index: science/latte/Makefile
>===================================================================
>--- science/latte/Makefile	(revision 531483)
>+++ science/latte/Makefile	(working copy)
>@@ -3,7 +3,7 @@
> PORTNAME=	latte
> DISTVERSIONPREFIX=	v
> DISTVERSION=	1.2.1
>-PORTREVISION=	7
>+PORTREVISION=	8
> CATEGORIES=	science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -34,8 +34,8 @@
> OPENMP_CMAKE_BOOL=	OPENMP
> 
> MPI_CMAKE_BOOL=		DO_MPI
>-MPI_LIB_DEPENDS=	libmpi.so:net/openmpi
>-MPI_LDFLAGS=		${LOCALBASE}/mpi/openmpi/lib/libmpi_mpifh.so
>+MPI_LIB_DEPENDS=	libmpi.so:net/openmpi3
>+MPI_LDFLAGS=		${LOCALBASE}/mpi/openmpi3/lib/libmpi_mpifh.so
> MPI_PLIST_FILES=	bin/LATTE_MPI_DOUBLE
> MPI_PLIST_FILES_OFF=	bin/LATTE_DOUBLE
> 
>Index: science/liggghts/Makefile
>===================================================================
>--- science/liggghts/Makefile	(revision 531483)
>+++ science/liggghts/Makefile	(working copy)
>@@ -2,7 +2,7 @@
> 
> PORTNAME=	liggghts
> DISTVERSION=	3.8.0
>-PORTREVISION=	5
>+PORTREVISION=	6
> CATEGORIES=	science
> 
> MAINTAINER=	yuri@FreeBSD.org
>@@ -14,7 +14,7 @@
> BUILD_DEPENDS=	gsed:textproc/gsed
> LIB_DEPENDS=	libexpat.so:textproc/expat2 \
> 		libfreetype.so:print/freetype2 \
>-		libmpi.so:net/openmpi \
>+		libmpi.so:net/openmpi3 \
> 		libpng.so:graphics/png \
> 		libtiff.so:graphics/tiff \
> 		libvtkViewsCore-8.1.so:math/vtk8
>@@ -27,7 +27,8 @@
> USE_QT=		core gui sql widgets qmake_build buildtools_build
> USE_LDCONFIG=	yes
> 
>-CMAKE_ARGS=	-DMPI_C_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi/bin/mpicc" -DMPI_CXX_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi/bin/mpicxx" \
>+CMAKE_ARGS=	-DMPI_C_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi3/bin/mpicc" \
>+		-DMPI_CXX_COMPILER:FILEPATH="${LOCALBASE}/mpi/openmpi3/bin/mpicxx" \
> 		-DVTK_DIR:FILEPATH="${LOCALBASE}/lib/cmake/vtk-8.1"
> 
> WRKSRC_SUBDIR=	src
>Index: science/sparta/Makefile
>===================================================================
>--- science/sparta/Makefile	(revision 531483)
>+++ science/sparta/Makefile	(working copy)
>@@ -2,6 +2,7 @@
> 
> PORTNAME=	sparta
> PORTVERSION=	${GH_TAGNAME:C/([0-9]{1,2})([A-Z][a-z][a-z])([0-9]{4})/\3.\2.\1/S/Jan/01/S/Feb/02/S/Mar/03/S/Apr/04/S/May/05/S/Jun/06/S/Jul/07/S/Aug/08/S/Sep/09/S/Oct/10/S/Nov/11/S/Dec/12/}
>+PORTREVISION=	1
> CATEGORIES=	science
> PKGNAMESUFFIX=	-dsmc # Direct Simulation Monte Carlo
> 
>@@ -33,9 +34,9 @@
> 
> MPI_ALL_TARGET=			mpi
> MPI_PLIST_FILES=		bin/spa_mpi
>-MPI_CXXFLAGS=			-I${LOCALBASE}/mpi/openmpi/include
>-MPI_LDFLAGS=			${LOCALBASE}/mpi/openmpi/lib/libmpi.so ${LOCALBASE}/mpi/openmpi/lib/libmpi_cxx.so -Wl,-rpath=${LOCALBASE}/mpi/openmpi/lib
>-MPI_LIB_DEPENDS=		libmpi.so:net/openmpi
>+MPI_CXXFLAGS=			-I${LOCALBASE}/mpi/openmpi3/include
>+MPI_LDFLAGS=			${LOCALBASE}/mpi/openmpi3/lib/libmpi.so ${LOCALBASE}/mpi/openmpi3/lib/libmpi_cxx.so -Wl,-rpath=${LOCALBASE}/mpi/openmpi3/lib
>+MPI_LIB_DEPENDS=		libmpi.so:net/openmpi3
> 
> PORTSCOUT=	ignore:1 # due to a special version tagging scheme that this project uses portscout fails to find new versions, watching their release page instead
>

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