FreeBSD Bugzilla – Attachment 230085 Details for
Bug 260395
math/polymake: update to version 4.5
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[patch]
math/polymake: update to version 4.5
math_polymake.diff (text/plain), 20.08 KB, created by
Philipp Ost
on 2021-12-13 19:27:05 UTC
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Description:
math/polymake: update to version 4.5
Filename:
MIME Type:
Creator:
Philipp Ost
Created:
2021-12-13 19:27:05 UTC
Size:
20.08 KB
patch
obsolete
>diff --git a/math/polymake/Makefile b/math/polymake/Makefile >index 36b3127b7bc1..53532cc59619 100644 >--- a/math/polymake/Makefile >+++ b/math/polymake/Makefile >@@ -1,8 +1,7 @@ > # Created by: Ewgenij Gawrilow <gawrilow@math.tu-berlin.de> > > PORTNAME= polymake >-DISTVERSION= 4.4 >-PORTREVISION= 2 >+DISTVERSION= 4.5 > CATEGORIES= math > MASTER_SITES= https://polymake.org/lib/exe/fetch.php/download/ > DISTNAME= ${PORTNAME}-${DISTVERSION}-minimal >@@ -111,7 +110,6 @@ NORMALIZ_CONFIGURE_ON= --with-libnormaliz=${LOCALBASE} > NORMALIZ_CONFIGURE_OFF= --without-libnormaliz > NORMALIZ_LIB_DEPENDS= libnormaliz.so:math/libnormaliz > >-OPENMP_USES= compiler:openmp > OPENMP_CONFIGURE_OFF= --without-openmp > > PPL_CONFIGURE_ON= --with-ppl=${LOCALBASE} >diff --git a/math/polymake/distinfo b/math/polymake/distinfo >index 1148014eeb28..5ba94b51eda0 100644 >--- a/math/polymake/distinfo >+++ b/math/polymake/distinfo >@@ -1,3 +1,3 @@ >-TIMESTAMP = 1622150271 >-SHA256 (polymake-4.4-minimal.tar.bz2) = da7179176c739c8efba65d93b25af103c1cba70e1f9b35673ce33c37790ec091 >-SIZE (polymake-4.4-minimal.tar.bz2) = 5620609 >+TIMESTAMP = 1633023218 >+SHA256 (polymake-4.5-minimal.tar.bz2) = e943d4bb31c112fad852340e3595bc591c2070692a16d50183a3b104566d7996 >+SIZE (polymake-4.5-minimal.tar.bz2) = 5634046 >diff --git a/math/polymake/files/patch-libnauty b/math/polymake/files/patch-libnauty >deleted file mode 100644 >index 5fdcada7fc95..000000000000 >--- a/math/polymake/files/patch-libnauty >+++ /dev/null >@@ -1,208 +0,0 @@ >-- patch from the upstream allowing to link to libnauty.so: https://github.com/polymake/polymake/issues/10#issuecomment-906184045 >-- updated to fix a testsuite regression: https://forum.polymake.org/viewtopic.php?f=10&p=3838#p3838 >- >-commit 3d5f15812247c37e1821d30a24e69acc308bc54b >-Author: Benjamin Lorenz <lorenz@math.tu-berlin.de> >-Date: Tue Aug 24 21:20:40 2021 +0200 >- >- bundled/nauty: add support for libnauty installation to configuration >- >- in addition to bundled and source-dir >- >- without any options this will try to run a test-program and fall back >- to the bundled nauty if that fails. >- >---- bundled/nauty/apps/graph/src/GraphIso.cc.orig 2021-05-18 08:50:05 UTC >-+++ bundled/nauty/apps/graph/src/GraphIso.cc >-@@ -29,8 +29,8 @@ >- #define set nauty_set >- #define permutation nauty_permutation >- >--#include <nauty.h> >--#include <naututil.h> >-+#include <nauty/nauty.h> >-+#include <nauty/naututil.h> >- #include <memory> >- >- namespace { >---- bundled/nauty/apps/graph/src/build_flags.pl.orig 2021-05-18 08:50:05 UTC >-+++ bundled/nauty/apps/graph/src/build_flags.pl >-@@ -1,6 +1,6 @@ >- # input for generate_ninja_targets.pl >- >--my $foreign_src = $ConfigFlags{'bundled.nauty.NautySrc'}; >-+my $foreign_src = $ConfigFlags{'bundled.nauty.NautySrc'} ne "bundled" && $ConfigFlags{'bundled.nauty.NautySrc'}; >- my $nauty_src = $foreign_src ? '${bundled.nauty.NautySrc}' : '${root}/bundled/nauty/external/nauty'; >- my $generated_dir = '${buildroot}/staticlib/nauty'; >- my @generated_headers = qw( nauty.h naututil.h gtools.h ); >-@@ -9,17 +9,21 @@ my @generated_out = map { "$generated_dir/$_" } @gener >- my $include_generated = ($foreign_src && grep { -f "$foreign_src/$_" } @generated_headers) >- ? join(" ", map { "-include $_" } @generated_out) >- : "-I$generated_dir"; >-+my $nauty_inc = $ConfigFlags{'bundled.nauty.NautySrc'} >-+ ? " -I$generated_dir -I$nauty_src" >-+ : ""; >- >--( CXXFLAGS => "-DBIGNAUTY -I$generated_dir -I$nauty_src", >-+( 'GraphIso.cc' => $nauty_inc, >- >-- GENERATED => { >-- out => "@generated_out", in => "@generated_in", >-- command => "cd $generated_dir; CC=\"\${CC}\" CFLAGS=\"\${CFLAGS}\" $nauty_src/configure --quiet >/dev/null 2>/dev/null; rm -f makefile", >-- }, >-- >-- staticlib => { >-- SOURCEDIR => $nauty_src, >-- SOURCES => [ qw(naugraph.c naurng.c nausparse.c nautaux.c nautil.c nautinv.c naututil.c nauty.c rng.c schreier.c) ], >-- CFLAGS => "-DBIGNAUTY $include_generated -I$nauty_src", >-- } >-+ $ConfigFlags{'bundled.nauty.NautySrc'} >-+ ? ( GENERATED => { >-+ out => "@generated_out", in => "@generated_in", >-+ command => "cd $generated_dir; CC=\"\${CC}\" CFLAGS=\"\${CFLAGS}\" $nauty_src/configure --quiet >/dev/null 2>/dev/null; rm -rf makefile nauty; ln -s . nauty", >-+ }, >-+ staticlib => { >-+ SOURCEDIR => $nauty_src, >-+ SOURCES => [ qw(naugraph.c naurng.c nausparse.c nautaux.c nautil.c nautinv.c naututil.c nauty.c rng.c schreier.c) ], >-+ CFLAGS => "$include_generated -I$nauty_src", >-+ } ) >-+ : () >- ) >---- bundled/nauty/support/configure.pl.orig 2021-05-18 08:50:05 UTC >-+++ bundled/nauty/support/configure.pl >-@@ -14,19 +14,19 @@ >- # GNU General Public License for more details. >- #------------------------------------------------------------------------------- >- >--@conf_vars=qw( NautySrc ); >-+@conf_vars=qw( NautySrc CXXFLAGS LDFLAGS LIBS ); >- >- sub allowed_options { >- my ($allowed_options, $allowed_with)=@_; >-- @$allowed_with{ qw( nauty-src ) }=(); >-+ @$allowed_with{ qw( nauty-src nauty ) }=(); >- } >- >- >- sub usage { >-- print STDERR " --with-nauty-src=PATH Source directory of nauty.\n", >-- " By default polymake will use the bundled nauty source files,\n", >-- " for the minimal tarball this option allows using a custom\n", >-- " directory containing the nauty sources.\n"; >-+ print STDERR " By default polymake will use the bundled nauty source files,\n", >-+ " these options allow using a custom nauty source or installation:\n", >-+ " --with-nauty-src=PATH Source directory of nauty.\n", >-+ " --with-nauty=PATH Installation prefix of nauty.\n"; >- } >- >- sub check_nauty { >-@@ -36,17 +36,101 @@ sub check_nauty { >- >- sub proceed { >- my ($options)=@_; >-- my $nautysrc; >-- if (defined ($nautysrc=$options->{"nauty-src"})) { >-- check_nauty($nautysrc) or >-- die "Specified nauty source directory invalid, could not find 'nauty-h.in'."; >-- $NautySrc = $nautysrc; >-- } elsif (!check_nauty()) { >-+ my $nauty_path; >-+ my $nauty_src; >-+ my $nautyver; >-+ $NautySrc = "bundled"; >-+ if (defined ($nauty_path=$options->{nauty}) && $nauty_path ne "bundled") { >-+ my $nauty_inc="$nauty_path/include"; >-+ my $nauty_lib=Polymake::Configure::get_libdir($nauty_path, "nauty"); >-+ unless (-f "$nauty_inc/nauty/nauty.h" >-+ && ( -f "$nauty_lib/libnauty.$Config::Config{dlext}" >-+ || -f "$nauty_lib/libnauty.a" ) ) { >-+ die "Invalid installation location of nauty library: header file nauty/nauty.h and/or library libnauty.$Config::Config{dlext} / libnauty.a not found\n"; >-+ } >-+ $LDFLAGS.=" -Wl,-rpath,$nauty_lib" >-+ if $nauty_path !~ m|^/usr$| && -f "$nauty_lib/libnauty.$Config::Config{dlext}"; >-+ $CXXFLAGS = "-I$nauty_inc"; >-+ $LDFLAGS = "-L$nauty_lib"; >-+ undef $NautySrc; >-+ } elsif (defined ($nauty_src=$options->{"nauty-src"}) && $nauty_src ne "bundled") { >-+ check_nauty($nauty_src) or >-+ die "Specified nauty source directory invalid, could not find 'nauty-h.in' in $nauty_src."; >-+ $NautySrc = "$nauty_src"; >-+ } >-+ >-+ if (!$nauty_src && $nauty_path ne "bundled" && $options->{prereq} ne ".none.") { >-+ # compile test-program, soft-fail >-+ my $testcode = <<'---'; >-+// simplified example from nautyex1.c from the nauty source >-+ >-+#define MAXN 1000 /* Define this before including nauty.h */ >-+#include <nauty/nauty.h> >-+#include <iostream> >-+ >-+int >-+main(int argc, char *argv[]) >-+{ >-+ graph g[MAXN*MAXM]; >-+ int lab[MAXN],ptn[MAXN],orbits[MAXN]; >-+ static DEFAULTOPTIONS_GRAPH(options); >-+ statsblk stats; >-+ int n = 5; >-+ int m = 1; >-+ int v; >-+ >-+ options.writeautoms = FALSE; >-+ >-+ /* The following optional call verifies that we are linking >-+ to compatible versions of the nauty routines. */ >-+ >-+ nauty_check(WORDSIZE,m,n,NAUTYVERSIONID); >-+ EMPTYGRAPH(g,m,n); >-+ for (v = 0; v < n; ++v) ADDONEEDGE(g,v,(v+1)%n,m); >-+ >-+ densenauty(g,lab,ptn,orbits,&options,&stats,m,n,NULL); >-+ std::cout << "VERSION " << NAUTYVERSIONID << std::endl; >-+ >-+ exit(0); >-+} >-+--- >-+ my $error=Polymake::Configure::build_test_program($testcode, LIBS => "-lnauty", CXXFLAGS => "$CXXFLAGS", LDFLAGS => "$LDFLAGS"); >-+ >-+ if ($? == 0) { >-+ my $message=Polymake::Configure::run_test_program(); >-+ if ($?) { >-+ check_nauty() and !defined($nauty_path) or >-+ die "Could not run a test program checking for nauty library.\n", >-+ "The complete error log follows:\n\n$message\n", >-+ "Please investigate the reasons and fix the installation.\n"; >-+ } else { >-+ ($nautyver) = $message =~ /VERSION (\d+)/; >-+ my $nautymin = 25000; # version*10000 >-+ if ($nautyver < $nautymin) { >-+ check_nauty() and !defined($nauty_path) or >-+ die "Your nauty version $nautyver is too old, at least version $nautymin is required.\n"; >-+ } else { >-+ undef $NautySrc; >-+ } >-+ } >-+ } else { >-+ check_nauty() and !defined($nauty_path) or >-+ die "Could not compile a test program checking for nauty.\n", >-+ "The most probable reasons are that the library is installed at a non-standard location,\n", >-+ "is not configured to build a shared module, or missing at all.\n", >-+ "The complete error log follows:\n\n$error\n", >-+ "Please install the library and specify its location using --with-nauty option, if needed.\n"; >-+ } >-+ } >-+ >-+ if ($NautySrc eq "bundled" && !check_nauty()) { >- die "Bundled nauty directory seems to be missing, to use the nauty interface\n", >- "with the minimal tarball please specify a nauty source directory\n", >-- "via --with-nauty-src=PATH."; >-+ "via --with-nauty-src=PATH, or a nauty installation with --with-nauty=PATH."; >-+ } elsif (!defined($NautySrc)) { >-+ $LIBS = "-lnauty"; >- } >- >-- return $NautySrc ? "$NautySrc" : "bundled"; >-+ return $NautySrc ? "source: $NautySrc" : ("version $nautyver @ ".($nauty_path//"system")); >- } >- >diff --git a/math/polymake/files/patch-support_install.pl b/math/polymake/files/patch-support_install.pl >deleted file mode 100644 >index 87b3cd70b0e3..000000000000 >--- a/math/polymake/files/patch-support_install.pl >+++ /dev/null >@@ -1,11 +0,0 @@ >---- support/install.pl.orig 2021-05-18 08:50:05 UTC >-+++ support/install.pl >-@@ -316,7 +316,7 @@ sub rel_symlink { >- my $rel_link = $link; >- my $common_prefix = 1; >- while ($rel_link =~ s{^(/[^/]+)(?=/)}{}) { >-- if ($common_prefix && substr($target, 0, length($1)) eq $1) { >-+ if ($common_prefix && substr($target, 0, length($1)+1) eq "$1/") { >- $target = substr($target, length($1)); >- } else { >- $common_prefix = 0; >diff --git a/math/polymake/pkg-plist b/math/polymake/pkg-plist >index b4882de8b653..1e65a6fdf264 100644 >--- a/math/polymake/pkg-plist >+++ b/math/polymake/pkg-plist >@@ -61,6 +61,7 @@ include/polymake/common/TOmath_decl.h > include/polymake/common/bounding_box.h > include/polymake/common/factorization.h > include/polymake/common/find_matrix_row_permutation.h >+include/polymake/common/finiteFieldLA.h > include/polymake/common/hadamard_product.h > include/polymake/common/incidence_tools.h > include/polymake/common/labels.h >@@ -79,6 +80,7 @@ include/polymake/fan/intersection.h > include/polymake/fan/next/compactification.h > include/polymake/fan/reverse_search_chamber_decomposition.h > include/polymake/fan/stacky_fan.h >+include/polymake/fan/stacky_fundamental_domain.h > include/polymake/fan/tight_span.h > include/polymake/graph/BasicLatticeTypes.h > include/polymake/graph/Closure.h >@@ -101,6 +103,7 @@ include/polymake/graph/bipartite.h > include/polymake/graph/bipartite.tcc > include/polymake/graph/compare.h > include/polymake/graph/connected.h >+include/polymake/graph/conway_impl.h > include/polymake/graph/diameter.h > include/polymake/graph/graph_iterators.h > include/polymake/graph/hungarian_method.h >@@ -113,6 +116,7 @@ include/polymake/graph/max_cliques.h > include/polymake/graph/max_cliques.tcc > include/polymake/graph/maximal_chains.h > include/polymake/graph/next/Decoration.h >+include/polymake/graph/next/DoublyConnectedEdgeList.h > include/polymake/graph/poset_tools.h > include/polymake/graph/strong_connected.h > include/polymake/group/action.h >@@ -328,6 +332,7 @@ include/polymake/tropical/cartesian_product.h > include/polymake/tropical/codim_one_with_locality.h > include/polymake/tropical/convex_hull_tools.h > include/polymake/tropical/covectors.h >+include/polymake/tropical/curve.h > include/polymake/tropical/cyclic_chains.h > include/polymake/tropical/divisor.h > include/polymake/tropical/double_description.h >@@ -350,6 +355,7 @@ include/polymake/tropical/morphism_values.h > include/polymake/tropical/next/covectors.h > include/polymake/tropical/patchwork.h > include/polymake/tropical/polynomial_tools.h >+include/polymake/tropical/polynomial_vanishing.h > include/polymake/tropical/pruefer.h > include/polymake/tropical/psi_classes.h > include/polymake/tropical/pullback.h >@@ -364,13 +370,13 @@ include/polymake/type_utils.h > include/polymake/vector > lib/libpolymake-apps-rt.so > lib/libpolymake-apps-rt.so.4 >-lib/libpolymake-apps-rt.so.4.4 >+lib/libpolymake-apps-rt.so.4.5 > lib/libpolymake-apps.so > lib/libpolymake-apps.so.4 >-lib/libpolymake-apps.so.4.4 >+lib/libpolymake-apps.so.4.5 > lib/libpolymake.so > lib/libpolymake.so.4 >-lib/libpolymake.so.4.4 >+lib/libpolymake.so.4.5 > libexec/polymake/config.ninja > libexec/polymake/lib/common.so > libexec/polymake/lib/fan.so >@@ -380,10 +386,10 @@ libexec/polymake/lib/group.so > libexec/polymake/lib/ideal.so > libexec/polymake/lib/libpolymake-apps-rt.so > libexec/polymake/lib/libpolymake-apps-rt.so.4 >-libexec/polymake/lib/libpolymake-apps-rt.so.4.4 >+libexec/polymake/lib/libpolymake-apps-rt.so.4.5 > libexec/polymake/lib/libpolymake-apps.so > libexec/polymake/lib/libpolymake-apps.so.4 >-libexec/polymake/lib/libpolymake-apps.so.4.4 >+libexec/polymake/lib/libpolymake-apps.so.4.5 > libexec/polymake/lib/matroid.so > libexec/polymake/lib/polytope.so > libexec/polymake/lib/topaz.so >@@ -515,7 +521,6 @@ libexec/polymake/shared > %%DATADIR%%/apps/fan/src/remove_redundancies.cc > %%DATADIR%%/apps/fan/src/reverse_search_chamber_decomposition.cc > %%DATADIR%%/apps/fan/src/secondary_fan.cc >-%%DATADIR%%/apps/fan/src/stacky_fan.cc > %%DATADIR%%/apps/fan/src/stacky_fundamental_domain.cc > %%DATADIR%%/apps/fan/src/tight_span.cc > %%DATADIR%%/apps/fan/src/tiling_quotient.cc >@@ -541,6 +546,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/graph/perllib/Visual/Lattice.pm > %%DATADIR%%/apps/graph/rules/common.rules > %%DATADIR%%/apps/graph/rules/compare.rules >+%%DATADIR%%/apps/graph/rules/doubly_connected_edge_list.rules > %%DATADIR%%/apps/graph/rules/geometric_graph.rules > %%DATADIR%%/apps/graph/rules/graph_properties.rules > %%DATADIR%%/apps/graph/rules/graphviz.rules >@@ -598,7 +604,6 @@ libexec/polymake/shared > %%DATADIR%%/apps/group/rules/help.rules > %%DATADIR%%/apps/group/rules/main.rules > %%DATADIR%%/apps/group/rules/permlib.rules >-%%DATADIR%%/apps/group/rules/polytope_group.rules > %%DATADIR%%/apps/group/rules/switch_table.rules > %%DATADIR%%/apps/group/src/col_to_row_action.cc > %%DATADIR%%/apps/group/src/conjugacy_classes.cc >@@ -781,6 +786,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/polytope/src/centroid_volume.cc > %%DATADIR%%/apps/polytope/src/check_inc.cc > %%DATADIR%%/apps/polytope/src/check_poly.cc >+%%DATADIR%%/apps/polytope/src/chirotope.cc > %%DATADIR%%/apps/polytope/src/circuit_completions.cc > %%DATADIR%%/apps/polytope/src/cocircuit_equations.cc > %%DATADIR%%/apps/polytope/src/common_refinement.cc >@@ -788,6 +794,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/polytope/src/congruent_polytopes.cc > %%DATADIR%%/apps/polytope/src/contains.cc > %%DATADIR%%/apps/polytope/src/conv.cc >+%%DATADIR%%/apps/polytope/src/conway.cc > %%DATADIR%%/apps/polytope/src/core_point_algo.cc > %%DATADIR%%/apps/polytope/src/cross.cc > %%DATADIR%%/apps/polytope/src/crosscut_complex.cc >@@ -854,6 +861,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/polytope/src/lattice_normalization.cc > %%DATADIR%%/apps/polytope/src/lattice_pyramid.cc > %%DATADIR%%/apps/polytope/src/lineality_via_lp.cc >+%%DATADIR%%/apps/polytope/src/linear_symmetries_matrix.cc > %%DATADIR%%/apps/polytope/src/long_and_winding.cc > %%DATADIR%%/apps/polytope/src/mapping_polytope.cc > %%DATADIR%%/apps/polytope/src/massive_gkz.cc >@@ -864,6 +872,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/polytope/src/minkowski_sum.cc > %%DATADIR%%/apps/polytope/src/mixed_integer_hull.cc > %%DATADIR%%/apps/polytope/src/mixed_volume.cc >+%%DATADIR%%/apps/polytope/src/mps2poly.cc > %%DATADIR%%/apps/polytope/src/multiplex.cc > %%DATADIR%%/apps/polytope/src/n_fine_triangulations.cc > %%DATADIR%%/apps/polytope/src/n_gon.cc >@@ -882,6 +891,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/polytope/src/polarize.cc > %%DATADIR%%/apps/polytope/src/poly2lp.cc > %%DATADIR%%/apps/polytope/src/poly2metric.cc >+%%DATADIR%%/apps/polytope/src/poly2mps.cc > %%DATADIR%%/apps/polytope/src/polynomial_conversion.cc > %%DATADIR%%/apps/polytope/src/print_constraints.cc > %%DATADIR%%/apps/polytope/src/prism.cc >@@ -1059,6 +1069,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/tropical/rules/cone.rules > %%DATADIR%%/apps/tropical/rules/cone_properties.rules > %%DATADIR%%/apps/tropical/rules/covector_lattice.rules >+%%DATADIR%%/apps/tropical/rules/curve.rules > %%DATADIR%%/apps/tropical/rules/cycle.rules > %%DATADIR%%/apps/tropical/rules/gfan.rules > %%DATADIR%%/apps/tropical/rules/help.rules >@@ -1079,6 +1090,7 @@ libexec/polymake/shared > %%DATADIR%%/apps/tropical/src/compute_maximal_covectors.cc > %%DATADIR%%/apps/tropical/src/covector_decomposition.cc > %%DATADIR%%/apps/tropical/src/covectors.cc >+%%DATADIR%%/apps/tropical/src/curve.cc > %%DATADIR%%/apps/tropical/src/cycle_edge_lengths.cc > %%DATADIR%%/apps/tropical/src/cyclic.cc > %%DATADIR%%/apps/tropical/src/discard_non_vertices.cc >@@ -1099,9 +1111,12 @@ libexec/polymake/shared > %%DATADIR%%/apps/tropical/src/map_perm.cc > %%DATADIR%%/apps/tropical/src/matroid_polytope.cc > %%DATADIR%%/apps/tropical/src/minkowski_sum.cc >+%%DATADIR%%/apps/tropical/src/moduli_cell_of_curve.cc >+%%DATADIR%%/apps/tropical/src/moduli_space_of_curve.cc > %%DATADIR%%/apps/tropical/src/nearest_point.cc > %%DATADIR%%/apps/tropical/src/patchwork.cc > %%DATADIR%%/apps/tropical/src/points2hypersurface.cc >+%%DATADIR%%/apps/tropical/src/polynomial_vanishing.cc > %%DATADIR%%/apps/tropical/src/thomog.cc > %%DATADIR%%/apps/tropical/src/tpluecker.cc > %%DATADIR%%/apps/tropical/src/tropicalNorm.cc >@@ -1198,6 +1213,8 @@ libexec/polymake/shared > %%DATADIR%%/bundled/flint/apps/common/src/QuadraticExtension.cc > %%DATADIR%%/bundled/flint/apps/common/src/factorization.cc > %%DATADIR%%/bundled/flint/apps/common/src/sum_of_square_roots_naive.cc >+%%DATADIR%%/bundled/flint/apps/matroid/rules/main.rules >+%%DATADIR%%/bundled/flint/apps/matroid/src/bases_from_points_flint.cc > %%DATADIR%%/bundled/flint/apps/polytope/src/maximal_ball.cc > %%DATADIR%%/bundled/flint/apps/topaz/rules/main.rules > %%DATADIR%%/bundled/flint/apps/topaz/src/homology_flint.cc >@@ -1273,6 +1290,7 @@ libexec/polymake/shared > %%DATADIR%%/demo/files/json_and_polydb/polydb_meta/Polytopes/01Polytopes/schema.2.1.json > %%DATADIR%%/demo/files/json_and_polydb/polydb_meta/Polytopes/Polytopes.2.1.json > %%DATADIR%%/demo/files/optimization/c3t.lp >+ %%DATADIR%%/demo/files/optimization/c3t.mps > %%DATADIR%%/demo/files/optimization/lpclosure.pl > %%DATADIR%%/demo/files/optimization/mip.lp > %%DATADIR%%/demo/files/optimization/stab.lp >@@ -1473,6 +1491,7 @@ libexec/polymake/shared > %%DATADIR%%/upgrades/4.2 > %%DATADIR%%/upgrades/4.3 > %%DATADIR%%/upgrades/4.4 >+%%DATADIR%%/upgrades/4.5 > %%DATADIR%%/upgrades/big_objects-2.10.1 > %%DATADIR%%/upgrades/big_objects-2.11.1 > %%DATADIR%%/upgrades/big_objects-2.12.1 >@@ -1488,6 +1507,7 @@ libexec/polymake/shared > %%DATADIR%%/upgrades/big_objects-4.2.1 > %%DATADIR%%/upgrades/big_objects-4.3.1 > %%DATADIR%%/upgrades/big_objects-4.3.3 >+%%DATADIR%%/upgrades/big_objects-4.4.1 > @dir libexec/polymake/bundled/atint > %%BLISS%%@dir libexec/polymake/bundled/bliss > @dir libexec/polymake/bundled/cdd
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