Attachment 255520 Details for Bug 283035 – [PATCH] biology/fasttree: update 2.1.10 → 2.1.11

[patch] [PATCH] biology/fasttree: update 2.1.10 → 2.1.11

0001-biology-fasttree-update-2.1.10-2.1.11.patch (text/plain), 2.46 KB, created by Älven on 2024-11-29 06:30:03 UTC

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Creator: Älven

Created: 2024-11-29 06:30:03 UTC

Size: 2.46 KB

patch

obsolete

>From 4ba005c6bde3c99be58a7a53a0c846735044a4d5 Mon Sep 17 00:00:00 2001
>From: Ãlven <alster@vinterdalen.se>
>Date: Fri, 29 Nov 2024 10:27:44 +0400
>Subject: [PATCH] biology/fasttree: update 2.1.10 â 2.1.11
>MIME-Version: 1.0
>Content-Type: text/plain; charset=UTF-8
>Content-Transfer-Encoding: 8bit
>
>---
> biology/fasttree/Makefile                                 | 8 ++++----
> biology/fasttree/distinfo                                 | 6 +++---
> .../{patch-FastTree-2.1.10.c => patch-FastTree-2.1.11.c}  | 4 ++--
> 3 files changed, 9 insertions(+), 9 deletions(-)
> rename biology/fasttree/files/{patch-FastTree-2.1.10.c => patch-FastTree-2.1.11.c} (77%)
>
>diff --git a/biology/fasttree/Makefile b/biology/fasttree/Makefile
>index 560274658cd1..a0dbe49b8596 100644
>--- a/biology/fasttree/Makefile
>+++ b/biology/fasttree/Makefile
>@@ -1,17 +1,17 @@
> PORTNAME=	FastTree
>-DISTVERSION=	2.1.10
>-PORTREVISION=	5
>+DISTVERSION=	2.1.11
> CATEGORIES=	biology
>-MASTER_SITES=	http://www.microbesonline.org/fasttree/
>+MASTER_SITES=	https://www.microbesonline.org/fasttree/
> EXTRACT_SUFX=	.c
> 
> MAINTAINER=	jwb@FreeBSD.org
> COMMENT=	Approximately-maximum-likelihood phylogenetic trees from alignments
>-WWW=		http://www.microbesonline.org/fasttree/
>+WWW=		https://www.microbesonline.org/fasttree/
> 
> LICENSE=	GPLv2+
> 
> NO_WRKSUBDIR=	yes
>+
> PLIST_FILES=	bin/FastTree
> 
> .if !exists(/usr/include/omp.h)
>diff --git a/biology/fasttree/distinfo b/biology/fasttree/distinfo
>index 2777da148528..2b1eecd7ac7f 100644
>--- a/biology/fasttree/distinfo
>+++ b/biology/fasttree/distinfo
>@@ -1,3 +1,3 @@
>-TIMESTAMP = 1512317739
>-SHA256 (FastTree-2.1.10.c) = 54cb89fc1728a974a59eae7a7ee6309cdd3cddda9a4c55b700a71219fc6e926d
>-SIZE (FastTree-2.1.10.c) = 390916
>+TIMESTAMP = 1732861256
>+SHA256 (FastTree-2.1.11.c) = 9026ae550307374be92913d3098f8d44187d30bea07902b9dcbfb123eaa2050f
>+SIZE (FastTree-2.1.11.c) = 395543
>diff --git a/biology/fasttree/files/patch-FastTree-2.1.10.c b/biology/fasttree/files/patch-FastTree-2.1.11.c
>similarity index 77%
>rename from biology/fasttree/files/patch-FastTree-2.1.10.c
>rename to biology/fasttree/files/patch-FastTree-2.1.11.c
>index 36dd31ceb877..274e2d7719af 100644
>--- a/biology/fasttree/files/patch-FastTree-2.1.10.c
>+++ b/biology/fasttree/files/patch-FastTree-2.1.11.c
>@@ -1,5 +1,5 @@
>---- FastTree-2.1.10.c.orig	2017-12-04 15:09:11 UTC
>-+++ FastTree-2.1.10.c
>+--- FastTree-2.1.11.c.orig	2017-12-04 15:09:11 UTC
>++++ FastTree-2.1.11.c
> @@ -8759,7 +8759,7 @@ double pnorm(double x)
>  
>  void *mymalloc(size_t sz) {
>-- 
>2.47.1
>

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alster: maintainer-approval? (jwb)

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Attachments on bug 283035: 255520