FreeBSD Bugzilla – Attachment 52326 Details for
Bug 79304
update biology/treeviewx to latest release
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[patch]
treeviewx.diff
treeviewx.diff (text/plain), 2.83 KB, created by
Fernan Aguero
on 2005-03-28 16:40:01 UTC
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Description:
treeviewx.diff
Filename:
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Creator:
Fernan Aguero
Created:
2005-03-28 16:40:01 UTC
Size:
2.83 KB
patch
obsolete
>diff -ruN /usr/ports/biology/treeviewx/Makefile treeviewx/Makefile >--- /usr/ports/biology/treeviewx/Makefile Sat Mar 12 19:41:41 2005 >+++ treeviewx/Makefile Thu Mar 24 21:07:26 2005 >@@ -1,3 +1,4 @@ >+# ex:ts=8 > # Ports collection makefile for: treeviewx > # Date created: 04 August 2001 > # Whom: tonym >@@ -6,20 +7,21 @@ > # > > PORTNAME= treeviewx >-PORTVERSION= 0.4 >-PORTREVISION= 3 >+PORTVERSION= 0.5 > CATEGORIES= biology >-MASTER_SITES= http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/ >+MASTER_SITES= http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/${PORTVERSION}/ > DISTNAME= tv-${PORTVERSION} > > MAINTAINER= tonym@biolateral.com.au > COMMENT= A phylogenetic tree viewer > >-LIB_DEPENDS= wx_gtk2-2.4.0:${PORTSDIR}/x11-toolkits/wxgtk2 >+LIB_DEPENDS= wx_gtk2-2.4.0:${PORTSDIR}/x11-toolkits/wxgtk2 \ >+ wx_gtk2_dcsvg-2.4.0:${PORTSDIR}/x11-toolkits/wxgtk2-contrib > > USE_GMAKE= yes > GNU_CONFIGURE= yes > CONFIGURE_ENV= WX_CONFIG="${X11BASE}/bin/wxgtk2-2.4-config" >+ > PLIST_FILES= bin/tv > > .include <bsd.port.pre.mk> >diff -ruN /usr/ports/biology/treeviewx/distinfo treeviewx/distinfo >--- /usr/ports/biology/treeviewx/distinfo Sat Mar 6 01:03:53 2004 >+++ treeviewx/distinfo Thu Mar 24 11:16:37 2005 >@@ -1,2 +1,2 @@ >-MD5 (tv-0.4.tar.gz) = a0f556e474804e59a72ff24ee0d8f10d >-SIZE (tv-0.4.tar.gz) = 336684 >+MD5 (tv-0.5.tar.gz) = 6c8bf75667184943f4d3f047a4e7538d >+SIZE (tv-0.5.tar.gz) = 394811 >diff -ruN /usr/ports/biology/treeviewx/files/patch-Makefile.in treeviewx/files/patch-Makefile.in >--- /usr/ports/biology/treeviewx/files/patch-Makefile.in Wed Dec 31 21:00:00 1969 >+++ treeviewx/files/patch-Makefile.in Thu Mar 24 19:44:15 2005 >@@ -0,0 +1,11 @@ >+--- Makefile.in.orig Thu Mar 24 19:41:44 2005 >++++ Makefile.in Thu Mar 24 19:42:32 2005 >+@@ -91,7 +91,7 @@ >+ NCLDIR = ncl-2.0/src >+ #LIBDIRS = -L$(NCLDIR) >+ #-L$(XMLPARSEDIR) >+-LIBS = @LIBS@ -lwx_gtk_dcsvg-2.4 -L$(NCLDIR) -lncl -L$(TREELIBDIR) -ltreelib >++LIBS = @LIBS@ -lwx_gtk2_dcsvg-2.4 -L$(NCLDIR) -lncl -L$(TREELIBDIR) -ltreelib >+ #-lexpat >+ INCLUDES = -I$(NCLDIR) -I$(TREELIBDIR) -I$(GPORTDIR) >+ #-I$(EXPATPPDIR) -I$(XMLPARSEDIR) -I$(EXPATPPDIR)/xmltok >diff -ruN /usr/ports/biology/treeviewx/pkg-descr treeviewx/pkg-descr >--- /usr/ports/biology/treeviewx/pkg-descr Fri Aug 17 05:39:27 2001 >+++ treeviewx/pkg-descr Thu Mar 24 11:17:40 2005 >@@ -1,6 +1,9 @@ >-"TreeView X is program to display phylogenetic trees on Unix-like platforms. >+TreeView X is program to display phylogenetic trees on Unix-like platforms. > It can read and display NEXUS and Newick format tree files (such as those >-output by PAUP*, ClustalX, TREE-PUZZLE, and other programs)." >+output by PAUP*, ClustalX, TREE-PUZZLE, and other programs). It has a >+subset of the functionality of the version of TreeView available for the >+Mac Classic and Windows (it is roughly equivalent to version 0.95 of >+TreeView). > > WWW: http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/
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: 52326