Attachment 58377 Details for Bug 88007 – paml.diff

[patch] paml.diff

paml.diff (text/plain), 1.22 KB, created by Jean Milanez Melo on 2005-10-25 21:20:11 UTC

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Creator: Jean Milanez Melo

Created: 2005-10-25 21:20:11 UTC

Size: 1.22 KB

patch

obsolete

>diff -ruN paml.old/Makefile paml/Makefile
>--- paml.old/Makefile	Sat Nov  6 01:55:37 2004
>+++ paml/Makefile	Tue Oct 25 18:09:07 2005
>@@ -6,15 +6,17 @@
> #
> 
> PORTNAME=	paml
>-PORTVERSION=	3.14
>+PORTVERSION=	3.14b
>+PORTREVISION=	1
> CATEGORIES=	biology
>-MASTER_SITES=	ftp://abacus.gene.ucl.ac.uk/pub/paml/
>+MASTER_SITES=	http://abacus.gene.ucl.ac.uk/software/
> DISTNAME=	${PORTNAME}${PORTVERSION}
> 
> MAINTAINER=	dbader@eece.unm.edu
> COMMENT=	Phylogenetic Analysis by Maximum Likelihood (PAML)
> 
>-WRKSRC=		${WRKDIR}/${DISTNAME}/src
>+USE_GMAKE=	YES
>+WRKSRC=		${WRKDIR}/${DISTNAME:S/b/''/g}/src
> MAKE_ARGS=	CC="${CC}" CFLAGS="${CFLAGS}"
> 
> BINARIES=	baseml basemlg chi2 codeml evolver pamp yn00
>@@ -25,7 +27,7 @@
> .endfor
> .if !defined(NOPORTDOCS)
> 		${MKDIR} ${DOCSDIR}
>-		${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/doc/pamlDOC.pdf \
>+		${INSTALL_DATA} ${WRKDIR}/${DISTNAME:S/b/''/g}/doc/pamlDOC.pdf \
> 			${DOCSDIR}
> .endif
> 
>diff -ruN paml.old/distinfo paml/distinfo
>--- paml.old/distinfo	Sat Nov  6 01:55:37 2004
>+++ paml/distinfo	Tue Oct 25 17:53:28 2005
>@@ -1,2 +1,2 @@
>-MD5 (paml3.14.tar.gz) = 233ef39b09e406dc41fb81e14997b764
>-SIZE (paml3.14.tar.gz) = 1744383
>+MD5 (paml3.14b.tar.gz) = d71938de2a7d9828fb85ad2e83880a68
>+SIZE (paml3.14b.tar.gz) = 2144978

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Attachments on bug 88007: 58377