Attachment 60304 Details for Bug 90558 – file.diff

[patch] file.diff

file.diff (text/plain), 8.01 KB, created by tkato432 on 2005-12-17 15:10:06 UTC

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Creator: tkato432

Created: 2005-12-17 15:10:06 UTC

Size: 8.01 KB

patch

obsolete

>diff -urN /usr/ports/science/openbabel/Makefile science/openbabel/Makefile
>--- /usr/ports/science/openbabel/Makefile	Wed Nov 16 03:40:51 2005
>+++ science/openbabel/Makefile	Tue Dec 13 19:18:17 2005
>@@ -7,7 +7,7 @@
> #
> 
> PORTNAME=	openbabel
>-PORTVERSION=	1.100.2
>+PORTVERSION=	2.0.0
> CATEGORIES=	science
> MASTER_SITES=	${MASTER_SITE_SOURCEFORGE}
> MASTER_SITE_SUBDIR=	${PORTNAME}
>@@ -15,12 +15,25 @@
> MAINTAINER=	ports@FreeBSD.org
> COMMENT=	Chemistry file translation program
> 
>+USE_GCC=	3.4+
>+USE_GNOME=	gnomehack gnometarget libxml2
> USE_AUTOTOOLS=	libtool:15
>-USE_GNOME=	gnomehack gnometarget pkgconfig
>-GNU_CONFIGURE=	yes
>-CONFIGURE_ARGS=	--program-prefix=open
> INSTALLS_SHLIB=	yes
> 
>-MAN1=	openbabel.1
>+MAN1=		obchiral.1 obfit.1 obgrep.1 obprop.1 obrotate.1 openbabel.1 
>+
>+PLIST_SUB=	VERSION="${PORTVERSION}"
>+
>+post-extract:
>+	@${LN} -sf babel.1 ${WRKSRC}/doc/openbabel.1
>+
>+post-patch:
>+	@${REINPLACE_CMD} -e \
>+		's|= babel|= openbabel|g' ${WRKSRC}/doc/Makefile.in
>+	@${REINPLACE_CMD} -e 's| babel| openbabel|g ; \
>+		 s|"babel|"openbabel|g' ${WRKSRC}/doc/o*.1
>+	@${REINPLACE_CMD} -e 's|^babel|openbabel|g ; \
>+		 s|(babel|(openbabel|g ; \
>+		 s|= babel|= openbabel|g' ${WRKSRC}/src/Makefile.in
> 
> .include <bsd.port.mk>
>diff -urN /usr/ports/science/openbabel/distinfo science/openbabel/distinfo
>--- /usr/ports/science/openbabel/distinfo	Sat Nov 26 19:30:47 2005
>+++ science/openbabel/distinfo	Tue Dec 13 02:30:57 2005
>@@ -1,3 +1,3 @@
>-MD5 (openbabel-1.100.2.tar.gz) = 03de74acaadc4beb651f96485169ec65
>-SHA256 (openbabel-1.100.2.tar.gz) = 15c2f968c475bf8b9e0759ae455b0d7b06e6810c78a2cc2ae1de4cc11bb5f8fb
>-SIZE (openbabel-1.100.2.tar.gz) = 1010494
>+MD5 (openbabel-2.0.0.tar.gz) = 3bddfa9188042e2518eb53c064279b4e
>+SHA256 (openbabel-2.0.0.tar.gz) = 3fa557923daa8bea135a017910c78d8edcc49b4eec7ceadadbd2704f89455cb9
>+SIZE (openbabel-2.0.0.tar.gz) = 2421670
>diff -urN /usr/ports/science/openbabel/pkg-plist science/openbabel/pkg-plist
>--- /usr/ports/science/openbabel/pkg-plist	Fri Mar  5 10:48:21 2004
>+++ science/openbabel/pkg-plist	Tue Dec 13 14:52:51 2005
>@@ -1,58 +1,147 @@
>+bin/obchiral
>+bin/obfit
>+bin/obgrep
>+bin/obprop
>+bin/obrotate
> bin/openbabel
>-bin/openobfit
>-bin/openobgrep
>-bin/openobrotate
>-include/openbabel/aromatic.h
>-include/openbabel/atomtyp.h
>-include/openbabel/babelconfig.h
>-include/openbabel/base.h
>-include/openbabel/binary.h
>-include/openbabel/bitvec.h
>-include/openbabel/bondtyp.h
>-include/openbabel/bondtyper.h
>-include/openbabel/chains.h
>-include/openbabel/chiral.h
>-include/openbabel/crk.h
>-include/openbabel/data.h
>-include/openbabel/element.h
>-include/openbabel/extable.h
>-include/openbabel/fileformat.h
>-include/openbabel/generic.h
>-include/openbabel/grid.h
>-include/openbabel/isotope.h
>-include/openbabel/math/matrix3x3.h
>-include/openbabel/math/vector3.h
>-include/openbabel/matrix.h
>-include/openbabel/mol.h
>-include/openbabel/molchrg.h
>-include/openbabel/molvector.h
>-include/openbabel/oberror.h
>-include/openbabel/obifstream.h
>-include/openbabel/obutil.h
>-include/openbabel/parsmart.h
>-include/openbabel/patty.h
>-include/openbabel/phmodel.h
>-include/openbabel/phmodeldata.h
>-include/openbabel/resdata.h
>-include/openbabel/ring.h
>-include/openbabel/rotor.h
>-include/openbabel/smi.h
>-include/openbabel/typer.h
>-include/openbabel/types.h
>+include/inchi/aux2atom.h
>+include/inchi/comdef.h
>+include/inchi/extr_ct.h
>+include/inchi/ichi.h
>+include/inchi/ichi_bns.h
>+include/inchi/ichicano.h
>+include/inchi/ichicant.h
>+include/inchi/ichicomn.h
>+include/inchi/ichicomp.h
>+include/inchi/ichidrp.h
>+include/inchi/ichierr.h
>+include/inchi/ichimain.h
>+include/inchi/ichimake.h
>+include/inchi/ichinorm.h
>+include/inchi/ichiparm.h
>+include/inchi/ichiring.h
>+include/inchi/ichisize.h
>+include/inchi/ichister.h
>+include/inchi/ichitaut.h
>+include/inchi/ichitime.h
>+include/inchi/inchi_api.h
>+include/inchi/inchi_dll.h
>+include/inchi/inchi_dll_main.h
>+include/inchi/inpdef.h
>+include/inchi/lreadmol.h
>+include/inchi/mode.h
>+include/inchi/strutil.h
>+include/inchi/util.h
>+include/openbabel-2.0/openbabel/babelconfig.h
>+include/openbabel-2.0/openbabel/base.h
>+include/openbabel-2.0/openbabel/bitvec.h
>+include/openbabel-2.0/openbabel/bondtyper.h
>+include/openbabel-2.0/openbabel/chains.h
>+include/openbabel-2.0/openbabel/chiral.h
>+include/openbabel-2.0/openbabel/data.h
>+include/openbabel-2.0/openbabel/dlhandler.h
>+include/openbabel-2.0/openbabel/fingerprint.h
>+include/openbabel-2.0/openbabel/generic.h
>+include/openbabel-2.0/openbabel/grid.h
>+include/openbabel-2.0/openbabel/inchi_api.h
>+include/openbabel-2.0/openbabel/math/matrix3x3.h
>+include/openbabel-2.0/openbabel/math/vector3.h
>+include/openbabel-2.0/openbabel/matrix.h
>+include/openbabel-2.0/openbabel/mol.h
>+include/openbabel-2.0/openbabel/molchrg.h
>+include/openbabel-2.0/openbabel/obconversion.h
>+include/openbabel-2.0/openbabel/oberror.h
>+include/openbabel-2.0/openbabel/obiter.h
>+include/openbabel-2.0/openbabel/obmolecformat.h
>+include/openbabel-2.0/openbabel/obutil.h
>+include/openbabel-2.0/openbabel/parsmart.h
>+include/openbabel-2.0/openbabel/patty.h
>+include/openbabel-2.0/openbabel/phmodel.h
>+include/openbabel-2.0/openbabel/reaction.h
>+include/openbabel-2.0/openbabel/ring.h
>+include/openbabel-2.0/openbabel/rotamer.h
>+include/openbabel-2.0/openbabel/rotor.h
>+include/openbabel-2.0/openbabel/typer.h
>+lib/libinchi.a
>+lib/libinchi.so
>+lib/libinchi.so.0
> lib/libopenbabel.a
> lib/libopenbabel.so
>-lib/libopenbabel.so.0
>-libdata/pkgconfig/openbabel.pc
>-%%DATADIR%%/aromatic.txt
>-%%DATADIR%%/atomtyp.txt
>-%%DATADIR%%/bondtyp.txt
>-%%DATADIR%%/element.txt
>-%%DATADIR%%/extable.txt
>-%%DATADIR%%/isotope-small.txt
>-%%DATADIR%%/isotope.txt
>-%%DATADIR%%/phmodel.txt
>-%%DATADIR%%/resdata.txt
>-%%DATADIR%%/types.txt
>+lib/libopenbabel.so.1
>+lib/openbabel/APIInterface.so
>+lib/openbabel/CSRformat.so
>+lib/openbabel/PQSformat.so
>+lib/openbabel/alchemyformat.so
>+lib/openbabel/amberformat.so
>+lib/openbabel/balstformat.so
>+lib/openbabel/bgfformat.so
>+lib/openbabel/boxformat.so
>+lib/openbabel/cacaoformat.so
>+lib/openbabel/cacheformat.so
>+lib/openbabel/carformat.so
>+lib/openbabel/cccformat.so
>+lib/openbabel/chem3dformat.so
>+lib/openbabel/chemdrawformat.so
>+lib/openbabel/chemtoolformat.so
>+lib/openbabel/cmlreactlformat.so
>+lib/openbabel/copyformat.so
>+lib/openbabel/crkformat.so
>+lib/openbabel/cssrformat.so
>+lib/openbabel/dmolformat.so
>+lib/openbabel/fastsearchformat.so
>+lib/openbabel/featformat.so
>+lib/openbabel/fhformat.so
>+lib/openbabel/fingerprintformat.so
>+lib/openbabel/freefracformat.so
>+lib/openbabel/gamessformat.so
>+lib/openbabel/gaussformat.so
>+lib/openbabel/ghemicalformat.so
>+lib/openbabel/gromos96format.so
>+lib/openbabel/hinformat.so
>+lib/openbabel/inchiformat.so
>+lib/openbabel/jaguarformat.so
>+lib/openbabel/mdlformat.so
>+lib/openbabel/mmodformat.so
>+lib/openbabel/mol2format.so
>+lib/openbabel/mopacformat.so
>+lib/openbabel/mpdformat.so
>+lib/openbabel/mpqcformat.so
>+lib/openbabel/nwchemformat.so
>+lib/openbabel/pcmodelformat.so
>+lib/openbabel/pdbformat.so
>+lib/openbabel/povrayformat.so
>+lib/openbabel/pubchem.so
>+lib/openbabel/qchemformat.so
>+lib/openbabel/reportformat.so
>+lib/openbabel/rxnformat.so
>+lib/openbabel/shelxformat.so
>+lib/openbabel/smilesformat.so
>+lib/openbabel/tinkerformat.so
>+lib/openbabel/turbomoleformat.so
>+lib/openbabel/unichemformat.so
>+lib/openbabel/viewmolformat.so
>+lib/openbabel/xcmlformat.so
>+lib/openbabel/xedformat.so
>+lib/openbabel/xmlformat.so
>+lib/openbabel/xyzformat.so
>+lib/openbabel/yasaraformat.so
>+lib/openbabel/zindoformat.so
>+libdata/pkgconfig/openbabel-2.0.pc
>+%%DATADIR%%/%%VERSION%%/SMARTS_InteLigand.txt
>+%%DATADIR%%/%%VERSION%%/aromatic.txt
>+%%DATADIR%%/%%VERSION%%/atomtyp.txt
>+%%DATADIR%%/%%VERSION%%/bondtyp.txt
>+%%DATADIR%%/%%VERSION%%/element.txt
>+%%DATADIR%%/%%VERSION%%/isotope-small.txt
>+%%DATADIR%%/%%VERSION%%/isotope.txt
>+%%DATADIR%%/%%VERSION%%/patterns.txt
>+%%DATADIR%%/%%VERSION%%/phmodel.txt
>+%%DATADIR%%/%%VERSION%%/resdata.txt
>+%%DATADIR%%/%%VERSION%%/torlib.txt
>+%%DATADIR%%/%%VERSION%%/types.txt
>+@dirrm %%DATADIR%%/%%VERSION%%
> @dirrm %%DATADIR%%
>-@dirrm include/openbabel/math
>-@dirrm include/openbabel
>+@dirrm lib/openbabel
>+@dirrm include/openbabel-2.0/openbabel/math
>+@dirrm include/openbabel-2.0/openbabel
>+@dirrm include/openbabel-2.0

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Attachments on bug 90558: 60304