FreeBSD Bugzilla – Attachment 62559 Details for
Bug 93495
New port: science/minc2
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file.shar
file.shar (text/plain), 5.69 KB, created by
Jason Bacon
on 2006-02-17 20:20:08 UTC
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Description:
file.shar
Filename:
MIME Type:
Creator:
Jason Bacon
Created:
2006-02-17 20:20:08 UTC
Size:
5.69 KB
patch
obsolete
># This is a shell archive. Save it in a file, remove anything before ># this line, and then unpack it by entering "sh file". Note, it may ># create directories; files and directories will be owned by you and ># have default permissions. ># ># This archive contains: ># ># science/minc2 ># science/minc2/pkg-descr ># science/minc2/distinfo ># science/minc2/pkg-message ># science/minc2/pkg-plist ># science/minc2/Makefile ># >echo c - science/minc2 >mkdir -p science/minc2 > /dev/null 2>&1 >echo x - science/minc2/pkg-descr >sed 's/^X//' >science/minc2/pkg-descr << 'END-of-science/minc2/pkg-descr' >XMINC (Medical Imaging NetCDF) is a medical imaging data format and an >Xassociated set of tools and libraries. MINC was created in 1993 by Peter >XNeelin at the McConnell Brain Imaging Centre of the Montreal Neurological >XInstitute. Many others have contributed to the design and implementation >XMINC over the years. >X >XWWW: http://www.bic.mni.mcgill.ca/software/minc/ >X >XPort maintainer: Jason W. Bacon >X bacon@smithers.neuro.mcw.edu >END-of-science/minc2/pkg-descr >echo x - science/minc2/distinfo >sed 's/^X//' >science/minc2/distinfo << 'END-of-science/minc2/distinfo' >XMD5 (minc-2.0.09.tar.gz) = 8a8606163852f91d6dc66dbcc3fde4ee >XSHA256 (minc-2.0.09.tar.gz) = b55907a5dd26c1b98b39f6cb81133336d7c794d4f7d4ad38b02561a9cc489390 >XSIZE (minc-2.0.09.tar.gz) = 1418085 >END-of-science/minc2/distinfo >echo x - science/minc2/pkg-message >sed 's/^X//' >science/minc2/pkg-message << 'END-of-science/minc2/pkg-message' >X============================================================================= >XFor questions or comments regarding this port, please contact the >Xport maintainer: bacon@smithers.neuro.mcw.edu >X >XFor MINC usage, please visit the MINC WEB site at >X >Xhttp://www.bic.mni.mcgill.ca/software/minc/ >X============================================================================= >END-of-science/minc2/pkg-message >echo x - science/minc2/pkg-plist >sed 's/^X//' >science/minc2/pkg-plist << 'END-of-science/minc2/pkg-plist' >Xbin/dcm2mnc >Xbin/ecattominc >Xbin/invert_raw_image >Xbin/minc_modify_header >Xbin/mincaverage >Xbin/minccalc >Xbin/mincconcat >Xbin/mincconvert >Xbin/minccopy >Xbin/mincdiff >Xbin/mincdump >Xbin/mincedit >Xbin/mincexpand >Xbin/mincextract >Xbin/mincgen >Xbin/mincheader >Xbin/minchistory >Xbin/mincinfo >Xbin/minclookup >Xbin/mincmakescalar >Xbin/mincmakevector >Xbin/mincmath >Xbin/mincpik >Xbin/mincresample >Xbin/mincreshape >Xbin/mincstats >Xbin/minctoecat >Xbin/minctoraw >Xbin/mincview >Xbin/mincwindow >Xbin/mnc2nii >Xbin/nii2mnc >Xbin/rawtominc >Xbin/transformtags >Xbin/upet2mnc >Xbin/voxeltoworld >Xbin/worldtovoxel >Xbin/xfmconcat >Xbin/xfminvert >Xinclude/ParseArgv.h >Xinclude/minc.h >Xinclude/minc2.h >Xinclude/minc_compat.h >Xinclude/minc_simple.h >Xinclude/nd_loop.h >Xinclude/time_stamp.h >Xinclude/volume_io.h >Xinclude/volume_io/alloc.h >Xinclude/volume_io/arrays.h >Xinclude/volume_io/basic.h >Xinclude/volume_io/def_math.h >Xinclude/volume_io/files.h >Xinclude/volume_io/geom_structs.h >Xinclude/volume_io/geometry.h >Xinclude/volume_io/internal_volume_io.h >Xinclude/volume_io/multidim.h >Xinclude/volume_io/progress.h >Xinclude/volume_io/string_funcs.h >Xinclude/volume_io/system_dependent.h >Xinclude/volume_io/transforms.h >Xinclude/volume_io/vol_io_prototypes.h >Xinclude/volume_io/volume.h >Xinclude/volume_io/volume_cache.h >Xinclude/voxel_loop.h >Xlib/libminc2.a >Xlib/libminc2.so >Xlib/libminc2.so.2 >Xlib/libvolume_io2.a >Xlib/libvolume_io2.so >Xlib/libvolume_io2.so.2 >X@dirrm include/volume_io >END-of-science/minc2/pkg-plist >echo x - science/minc2/Makefile >sed 's/^X//' >science/minc2/Makefile << 'END-of-science/minc2/Makefile' >X############################################################################ >X# New ports collection Makefile for: minc 1.x (Medical Imaging NetCDF) >X# Date created: 21 Dec 2005 >X# Whom: jbacon >X# >X# $FreeBSD$ >X# >X >X############################################################################ >X# http://www.bic.mni.mcgill.ca/software/minc/ >X# is the ultimate source for MINC, and will always contain the latest >X# source release. If this port is not up to date enough for you, >X# you can download the latest sources and build manually. On FreeBSD, >X# you must configure with the environment variable LDFLAGS set to >X# ${LOCALBASE}/lib so that the configure script will find libnetcdf. >X# Of course, the netcdf port must be installed first. >X >XPORTNAME= minc >XPORTVERSION= 2.0.09 >XCATEGORIES= science biology >XMASTER_SITES= http://www.bic.mni.mcgill.ca/users/bert/ \ >X http://www.neuro.mcw.edu/~bacon/Ports/distfiles/ >X >XMAINTAINER= bacon@smithers.neuro.mcw.edu >XCOMMENT= Medical Imaging NetCDF >X >XLIB_DEPENDS= netcdf.1:${PORTSDIR}/science/netcdf \ >X hdf5:${PORTSDIR}/science/hdf5 >X >XINSTALLS_SHLIB= yes >X >XUSE_AUTOTOOLS= libtool:15 >X >XCONFLICTS= minc-1* >X >X# Build parameters >X#WRKSRC= ${WRKDIR}/minc-${PORTVERSION} >X >XMAN1= dcm2mnc.1 \ >X ecattominc.1 \ >X invert_raw_image.1 \ >X minc_modify_header.1 \ >X mincaverage.1 \ >X minccalc.1 \ >X mincconcat.1 \ >X mincconvert.1 \ >X minccopy.1 \ >X mincdiff.1 \ >X mincedit.1 \ >X mincexpand.1 \ >X mincextract.1 \ >X mincgen.1 \ >X mincheader.1 \ >X minchistory.1 \ >X mincinfo.1 \ >X minclookup.1 \ >X mincmakescalar.1 \ >X mincmakevector.1 \ >X mincmath.1 \ >X mincpik.1 \ >X mincresample.1 \ >X mincreshape.1 \ >X mincstats.1 \ >X minctoecat.1 \ >X minctoraw.1 \ >X mincview.1 \ >X mincwindow.1 \ >X mnc2nii.1 \ >X nii2mnc.1 \ >X rawtominc.1 \ >X transformtags.1 \ >X upet2mnc.1 \ >X voxeltoworld.1 \ >X xfmconcat.1 \ >X xfminvert.1 >XMAN3= ParseArgv.3 >X >XCONFIGURE_ENV= CPPFLAGS="-I${LOCALBASE}/include" \ >X LDFLAGS="${LDFLAGS} -L${LOCALBASE}/lib -lpthread" >XCONFIGURE_ARGS= --enable-shared=yes --enable-static=yes >XCONFIGURE_TARGET=--build=${MACHINE_ARCH}-portbld-freebsd${OSREL} >X >Xpost-install: >X ${CAT} ${PKGMESSAGE} >X >X.include <bsd.port.mk> >END-of-science/minc2/Makefile >exit
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