Attachment 90588 Details for Bug 127776 – file.diff

[patch] file.diff

file.diff (text/plain), 3.47 KB, created by wenheping on 2008-10-01 15:00:05 UTC

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Creator: wenheping

Created: 2008-10-01 15:00:05 UTC

Size: 3.47 KB

patch

obsolete

>--- Makefile.orig	2008-10-01 23:47:52.000000000 +0800
>+++ Makefile	2008-10-01 23:47:52.000000000 +0800
>@@ -6,7 +6,7 @@
> #
> 
> PORTNAME=	biopython
>-PORTVERSION=	1.47
>+PORTVERSION=	1.48
> CATEGORIES=	biology python
> MASTER_SITES=	http://www.biopython.org/DIST/
> PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
>--- distinfo.orig	2008-10-01 23:47:52.000000000 +0800
>+++ distinfo	2008-10-01 23:47:52.000000000 +0800
>@@ -1,3 +1,3 @@
>-MD5 (biopython-1.47.tar.gz) = d4906278f7f0d0054f20ea73565fdf43
>-SHA256 (biopython-1.47.tar.gz) = a83544c3ed155acfa3f38929b44a890e77806799399193e48b8787efa89b6213
>-SIZE (biopython-1.47.tar.gz) = 4114907
>+MD5 (biopython-1.48.tar.gz) = b049e3af8128bea68e4e86b55c6d0996
>+SHA256 (biopython-1.48.tar.gz) = cfb3a1774d1d4b01a66b3428cec7b4c943517b2485e0ca577a6b540818f29cb0
>+SIZE (biopython-1.48.tar.gz) = 4149100
>--- pkg-plist.orig	2008-10-01 23:47:52.000000000 +0800
>+++ pkg-plist	2008-10-01 23:47:52.000000000 +0800
>@@ -227,6 +227,12 @@
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer.py
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer.pyo
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer3.py
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer3.pyc
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/Primer3.pyo
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/PrimerSearch.py
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/PrimerSearch.pyc
>+%%PYTHON_SITELIBDIR%%/Bio/Emboss/PrimerSearch.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Emboss/__init__.pyo
>@@ -914,12 +920,18 @@
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/PhylipIO.py
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/PhylipIO.pyc
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/PhylipIO.pyo
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/PirIO.py
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/PirIO.pyc
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/PirIO.pyo
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/StockholmIO.py
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/StockholmIO.pyc
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/StockholmIO.pyo
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/SwissIO.py
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/SwissIO.pyc
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/SwissIO.pyo
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/TabIO.py
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/TabIO.pyc
>+%%PYTHON_SITELIBDIR%%/Bio/SeqIO/TabIO.pyo
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/SeqIO/__init__.pyo
>@@ -1001,18 +1013,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/ExPASy.py
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/ExPASy.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/ExPASy.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/InterPro.py
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/InterPro.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/InterPro.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/NCBI.py
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/NCBI.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/NCBI.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/SCOP.py
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/SCOP.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/WWW/SCOP.pyo
> %%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.pyo
>@@ -1031,9 +1031,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/biblio.py
>-%%PYTHON_SITELIBDIR%%/Bio/biblio.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/biblio.pyo
> %%PYTHON_SITELIBDIR%%/Bio/builders/Search/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/builders/Search/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/builders/Search/__init__.pyo

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Attachments on bug 127776: 90588