View | Details | Raw Unified | Return to bug 142221
Collapse All | Expand All

(-)Makefile (-1 / +1 lines)
Lines 6-12 Link Here
6
#
6
#
7
7
8
PORTNAME=	biopython
8
PORTNAME=	biopython
9
PORTVERSION=	1.51
9
PORTVERSION=	1.53
10
CATEGORIES=	biology python
10
CATEGORIES=	biology python
11
MASTER_SITES=	http://www.biopython.org/DIST/
11
MASTER_SITES=	http://www.biopython.org/DIST/
12
PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
12
PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
(-)distinfo (-3 / +3 lines)
Lines 1-3 Link Here
1
MD5 (biopython-1.51.tar.gz) = e973cb96b44b47526d31b6a0039c686f
1
MD5 (biopython-1.53.tar.gz) = df1004ec64b9b593c0e690c14a20667a
2
SHA256 (biopython-1.51.tar.gz) = 0ebf44e6376d7b44fb2857e751d388f30402d6a81798821e40a7f7b92a4b036b
2
SHA256 (biopython-1.53.tar.gz) = 0db8bf8d37641fdfc6a8aac248de3d8cb4111e55484deb43f67e8d7ad082013f
3
SIZE (biopython-1.51.tar.gz) = 5557548
3
SIZE (biopython-1.53.tar.gz) = 4284683
(-)pkg-plist (-95 / +35 lines)
Lines 162-236 Link Here
162
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.py
162
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.py
163
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.pyc
163
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.pyc
164
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.pyo
164
%%PYTHON_SITELIBDIR%%/Bio/DocSQL.pyo
165
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Config.py
166
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Config.pyc
167
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Config.pyo
168
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DBIdsClient.py
169
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DBIdsClient.pyc
170
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DBIdsClient.pyo
171
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/LinkOut.dtd
172
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/LinkOut.py
173
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/LinkOut.pyc
174
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/LinkOut.pyo
175
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/__init__.py
176
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/__init__.pyc
177
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/__init__.pyo
178
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eInfo_020511.dtd
179
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eInfo_020511.py
180
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eInfo_020511.pyc
181
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eInfo_020511.pyo
182
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eLink_020511.dtd
183
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eLink_020511.py
184
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eLink_020511.pyc
185
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eLink_020511.pyo
186
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/ePost_020511.dtd
187
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/ePost_020511.py
188
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/ePost_020511.pyc
189
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/ePost_020511.pyo
190
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSearch_020511.dtd
191
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSearch_020511.py
192
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSearch_020511.pyc
193
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSearch_020511.pyo
194
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSummary_020511.dtd
195
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSummary_020511.py
196
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSummary_020511.pyc
197
%%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs/eSummary_020511.pyo
198
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Datatypes.py
199
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Datatypes.pyc
200
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Datatypes.pyo
201
%%PYTHON_SITELIBDIR%%/Bio/EUtils/HistoryClient.py
202
%%PYTHON_SITELIBDIR%%/Bio/EUtils/HistoryClient.pyc
203
%%PYTHON_SITELIBDIR%%/Bio/EUtils/HistoryClient.pyo
204
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Mixins.py
205
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Mixins.pyc
206
%%PYTHON_SITELIBDIR%%/Bio/EUtils/Mixins.pyo
207
%%PYTHON_SITELIBDIR%%/Bio/EUtils/MultiDict.py
208
%%PYTHON_SITELIBDIR%%/Bio/EUtils/MultiDict.pyc
209
%%PYTHON_SITELIBDIR%%/Bio/EUtils/MultiDict.pyo
210
%%PYTHON_SITELIBDIR%%/Bio/EUtils/POM.py
211
%%PYTHON_SITELIBDIR%%/Bio/EUtils/POM.pyc
212
%%PYTHON_SITELIBDIR%%/Bio/EUtils/POM.pyo
213
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ReseekFile.py
214
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ReseekFile.pyc
215
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ReseekFile.pyo
216
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ThinClient.py
217
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ThinClient.pyc
218
%%PYTHON_SITELIBDIR%%/Bio/EUtils/ThinClient.pyo
219
%%PYTHON_SITELIBDIR%%/Bio/EUtils/__init__.py
220
%%PYTHON_SITELIBDIR%%/Bio/EUtils/__init__.pyc
221
%%PYTHON_SITELIBDIR%%/Bio/EUtils/__init__.pyo
222
%%PYTHON_SITELIBDIR%%/Bio/EUtils/dtd2py.py
223
%%PYTHON_SITELIBDIR%%/Bio/EUtils/dtd2py.pyc
224
%%PYTHON_SITELIBDIR%%/Bio/EUtils/dtd2py.pyo
225
%%PYTHON_SITELIBDIR%%/Bio/EUtils/parse.py
226
%%PYTHON_SITELIBDIR%%/Bio/EUtils/parse.pyc
227
%%PYTHON_SITELIBDIR%%/Bio/EUtils/parse.pyo
228
%%PYTHON_SITELIBDIR%%/Bio/EUtils/setup.py
229
%%PYTHON_SITELIBDIR%%/Bio/EUtils/setup.pyc
230
%%PYTHON_SITELIBDIR%%/Bio/EUtils/setup.pyo
231
%%PYTHON_SITELIBDIR%%/Bio/EUtils/sourcegen.py
232
%%PYTHON_SITELIBDIR%%/Bio/EUtils/sourcegen.pyc
233
%%PYTHON_SITELIBDIR%%/Bio/EUtils/sourcegen.pyo
234
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.py
165
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.py
235
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.pyc
166
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.pyc
236
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.pyo
167
%%PYTHON_SITELIBDIR%%/Bio/EZRetrieve.pyo
Lines 295-304 Link Here
295
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/eSpell.dtd
226
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/eSpell.dtd
296
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/eSummary_041029.dtd
227
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/eSummary_041029.dtd
297
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/egquery.dtd
228
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/egquery.dtd
229
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/pmc-1.dtd
230
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/pubmed_100101.dtd
231
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd
298
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmcommon_080101.dtd
232
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmcommon_080101.dtd
299
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmcommon_090101.dtd
233
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmcommon_090101.dtd
300
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedline_080101.dtd
234
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedline_080101.dtd
301
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedline_090101.dtd
235
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedline_090101.dtd
236
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd
302
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd
237
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd
303
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd
238
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd
304
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmserials_080101.dtd
239
%%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs/nlmserials_080101.dtd
Lines 566-571 Link Here
566
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.py
501
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.py
567
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.pyc
502
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.pyc
568
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.pyo
503
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MEME.pyo
504
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MAST.py
505
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MAST.pyc
506
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/MAST.pyo
569
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.py
507
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.py
570
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.pyc
508
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.pyc
571
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.pyo
509
%%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers/__init__.pyo
Lines 591-599 Link Here
591
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.py
529
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.py
592
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.pyc
530
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.pyc
593
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.pyo
531
%%PYTHON_SITELIBDIR%%/Bio/NaiveBayes.pyo
594
%%PYTHON_SITELIBDIR%%/Bio/Ndb/__init__.py
595
%%PYTHON_SITELIBDIR%%/Bio/Ndb/__init__.pyc
596
%%PYTHON_SITELIBDIR%%/Bio/Ndb/__init__.pyo
597
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.py
532
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.py
598
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.pyc
533
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.pyc
599
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.pyo
534
%%PYTHON_SITELIBDIR%%/Bio/NetCatch.pyo
Lines 778-783 Link Here
778
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.py
713
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.py
779
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.pyc
714
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.pyc
780
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.pyo
715
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Utils.pyo
716
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Controller.py
717
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Controller.pyc
718
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/Controller.pyo
719
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/EasyController.py
720
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/EasyController.pyc
721
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/EasyController.pyo
781
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.py
722
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.py
782
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.pyc
723
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.pyc
783
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.pyo
724
%%PYTHON_SITELIBDIR%%/Bio/PopGen/GenePop/__init__.pyo
Lines 821-830 Link Here
821
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.py
762
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.py
822
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.pyc
763
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.pyc
823
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.pyo
764
%%PYTHON_SITELIBDIR%%/Bio/Prosite/__init__.pyo
824
%%PYTHON_SITELIBDIR%%/Bio/PubMed.py
765
%%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.py
825
%%PYTHON_SITELIBDIR%%/Bio/PubMed.pyc
766
%%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.pyc
826
%%PYTHON_SITELIBDIR%%/Bio/PubMed.pyo
767
%%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.pyo
827
%%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.so
828
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.py
768
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.py
829
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyc
769
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyc
830
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyo
770
%%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyo
Lines 849-854 Link Here
849
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.py
789
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.py
850
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.pyc
790
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.pyc
851
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.pyo
791
%%PYTHON_SITELIBDIR%%/Bio/Restriction/__init__.pyo
792
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.py
793
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.pyc
794
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.pyo
852
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.py
795
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.py
853
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.pyc
796
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.pyc
854
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.pyo
797
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Cla.pyo
Lines 858-866 Link Here
858
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.py
801
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.py
859
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.pyc
802
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.pyc
860
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.pyo
803
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Dom.pyo
861
%%PYTHON_SITELIBDIR%%/Bio/SCOP/FileIndex.py
862
%%PYTHON_SITELIBDIR%%/Bio/SCOP/FileIndex.pyc
863
%%PYTHON_SITELIBDIR%%/Bio/SCOP/FileIndex.pyo
864
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.py
804
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.py
865
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.pyc
805
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.pyc
866
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.pyo
806
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Hie.pyo
Lines 870-878 Link Here
870
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.py
810
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.py
871
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.pyc
811
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.pyc
872
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.pyo
812
%%PYTHON_SITELIBDIR%%/Bio/SCOP/Residues.pyo
873
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.py
874
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.pyc
875
%%PYTHON_SITELIBDIR%%/Bio/SCOP/__init__.pyo
876
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.py
813
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.py
877
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.pyc
814
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.pyc
878
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.pyo
815
%%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/SVDSuperimposer.pyo
Lines 888-893 Link Here
888
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.py
825
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.py
889
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.pyc
826
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.pyc
890
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.pyo
827
%%PYTHON_SITELIBDIR%%/Bio/SeqFeature.pyo
828
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_convert.py
829
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_convert.pyc
830
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_convert.pyo
831
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_index.py
832
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_index.pyc
833
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/_index.pyo
891
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.py
834
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.py
892
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.pyc
835
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.pyc
893
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.pyo
836
%%PYTHON_SITELIBDIR%%/Bio/SeqIO/AceIO.pyo
Lines 957-962 Link Here
957
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.py
900
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.py
958
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.pyc
901
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.pyc
959
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.pyo
902
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Phd.pyo
903
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/__init__.py
904
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/__init__.pyc
905
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/__init__.pyo
906
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/_Novoalign.py
907
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/_Novoalign.pyc
908
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications/_Novoalign.pyo
960
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.py
909
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.py
961
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.pyc
910
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.pyc
962
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.pyo
911
%%PYTHON_SITELIBDIR%%/Bio/Sequencing/__init__.pyo
Lines 993-1001 Link Here
993
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.py
942
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.py
994
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyc
943
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyc
995
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyo
944
%%PYTHON_SITELIBDIR%%/Bio/UniGene/__init__.pyo
996
%%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.py
945
%%PYTHON_SITELIBDIR%%/Bio/UniGene/UniGene.py
997
%%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.pyc
946
%%PYTHON_SITELIBDIR%%/Bio/UniGene/UniGene.pyc
998
%%PYTHON_SITELIBDIR%%/Bio/WWW/__init__.pyo
947
%%PYTHON_SITELIBDIR%%/Bio/UniGene/UniGene.pyo
999
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.py
948
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.py
1000
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.pyc
949
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.pyc
1001
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.pyo
950
%%PYTHON_SITELIBDIR%%/Bio/Wise/__init__.pyo
Lines 1009-1021 Link Here
1009
%%PYTHON_SITELIBDIR%%/Bio/__init__.pyc
958
%%PYTHON_SITELIBDIR%%/Bio/__init__.pyc
1010
%%PYTHON_SITELIBDIR%%/Bio/__init__.pyo
959
%%PYTHON_SITELIBDIR%%/Bio/__init__.pyo
1011
%%PYTHON_SITELIBDIR%%/Bio/cMarkovModel.so
960
%%PYTHON_SITELIBDIR%%/Bio/cMarkovModel.so
1012
%%PYTHON_SITELIBDIR%%/Bio/clistfns.so
1013
%%PYTHON_SITELIBDIR%%/Bio/cmathfns.so
1014
%%PYTHON_SITELIBDIR%%/Bio/cpairwise2.so
961
%%PYTHON_SITELIBDIR%%/Bio/cpairwise2.so
1015
%%PYTHON_SITELIBDIR%%/Bio/cstringfns.so
1016
%%PYTHON_SITELIBDIR%%/Bio/distance.py
1017
%%PYTHON_SITELIBDIR%%/Bio/distance.pyc
1018
%%PYTHON_SITELIBDIR%%/Bio/distance.pyo
1019
%%PYTHON_SITELIBDIR%%/Bio/kNN.py
962
%%PYTHON_SITELIBDIR%%/Bio/kNN.py
1020
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyc
963
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyc
1021
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyo
964
%%PYTHON_SITELIBDIR%%/Bio/kNN.pyo
Lines 1052-1059 Link Here
1052
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
995
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
1053
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
996
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
1054
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
997
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
1055
@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs
1056
@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils
1057
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
998
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
1058
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
999
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
1059
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs
1000
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Entrez/DTDs
Lines 1085-1091 Link Here
1085
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers
1026
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Motif/Parsers
1086
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Motif
1027
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Motif
1087
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
1028
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
1088
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Ndb
1089
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
1029
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
1090
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
1030
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
1091
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
1031
@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
Lines 1108-1118 Link Here
1108
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
1048
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
1109
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
1049
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
1110
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
1050
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
1051
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing/Applications
1111
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
1052
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
1112
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
1053
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
1113
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
1054
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
1114
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
1055
@dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
1115
@dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
1056
@dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
1116
@dirrm %%PYTHON_SITELIBDIR%%/Bio/WWW
1117
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
1057
@dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
1118
@dirrm %%PYTHON_SITELIBDIR%%/Bio
1058
@dirrm %%PYTHON_SITELIBDIR%%/Bio

Return to bug 142221