Lines 2-11
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# $FreeBSD$ |
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# $FreeBSD$ |
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PORTNAME= phrap |
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PORTNAME= phrap |
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PORTVERSION= 0.990329 |
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PORTVERSION= 1.090518 |
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CATEGORIES= biology |
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CATEGORIES= biology |
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MASTER_SITES= # put the tarball manually |
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MASTER_SITES= # put the tarball manually |
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DISTFILES= distrib.tar.Z |
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DISTFILES= distrib.tar.gz |
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DIST_SUBDIR= ${PORTNAME} |
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DIST_SUBDIR= ${PORTNAME} |
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MAINTAINER= mzaki@m.u-tokyo.ac.jp |
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MAINTAINER= mzaki@m.u-tokyo.ac.jp |
Lines 19-37
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NO_WRKSUBDIR= yes |
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NO_WRKSUBDIR= yes |
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MAKEFILE= makefile |
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MAKEFILE= makefile |
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ALL_TARGET= all manyreads |
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ALL_TARGET= all |
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BINARIES= cluster cross_match cross_match.manyreads loco \ |
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BINARIES= calf_merge cluster cross_match loco phrap swat |
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phrap phrap.longreads phrap.manyreads swat |
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SCRIPTS= phrapview |
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SCRIPTS= phrapview |
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.for f in ${BINARIES} ${SCRIPTS} |
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PLIST_FILES+= bin/${f} |
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.endfor |
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PORTDATA= BLOSUM50 BLOSUM62 PAM250 mat50 mat70 penalty2 vector.seq |
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PORTDATA= BLOSUM50 BLOSUM62 PAM250 mat50 mat70 mb_matrix penalty2 vector.seq |
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PORTDOCS= general.doc phrap.doc swat.doc |
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PORTDOCS= general.doc phrap.doc swat.doc |
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NO_STAGE= yes |
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.include <bsd.port.pre.mk> |
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.include <bsd.port.pre.mk> |
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.for f in ${DISTFILES} |
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.for f in ${DISTFILES} |
Lines 42-62
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do-install: |
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do-install: |
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.for f in ${BINARIES} |
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.for f in ${BINARIES} |
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@${INSTALL_PROGRAM} ${WRKSRC}/${f} ${PREFIX}/bin/ |
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@${INSTALL_PROGRAM} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin/ |
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@${CHMOD} a-r ${PREFIX}/bin/${f} # as required by the agreement |
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.endfor |
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.endfor |
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.for f in ${SCRIPTS} |
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.for f in ${SCRIPTS} |
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@${INSTALL_SCRIPT} ${WRKSRC}/${f} ${PREFIX}/bin/ |
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@${INSTALL_SCRIPT} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin/ |
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.endfor |
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.endfor |
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@${MKDIR} ${DATADIR} |
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@${MKDIR} ${STAGEDIR}${DATADIR} |
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.for f in ${PORTDATA} |
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.for f in ${PORTDATA} |
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@${INSTALL_DATA} ${WRKSRC}/${f} ${DATADIR} |
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@${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${DATADIR} |
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.endfor |
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.endfor |
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.if ${PORT_OPTIONS:MDOCS} |
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@${MKDIR} ${STAGEDIR}${DOCSDIR} |
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@${MKDIR} ${DOCSDIR} |
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.for f in ${PORTDOCS} |
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.for f in ${PORTDOCS} |
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@${INSTALL_DATA} ${WRKSRC}/${f} ${DOCSDIR} |
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@${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${DOCSDIR} |
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.endfor |
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.endfor |
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.endif |
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.include <bsd.port.post.mk> |
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.include <bsd.port.post.mk> |