Attachment #146439 for bug #193090

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#STRIDE_DIST=		stride.tar.gz
STRIDE_DIST=		Stride_src.tar.Z

NO_STAGE=	yes
.include <bsd.port.pre.mk>

.if ${ARCH} == "amd64"

	${SETENV} ${MAKE_ENV} ${MAKE_CMD} -C ${WRKSRC}/lib/stride && ${MV} ${WRKSRC}/lib/stride/stride ${WRKSRC}/lib/stride/stride_${VMD_ARCH}

do-install:
	${SETENV} ${MAKE_ENV} DESTDIR=${STAGEDIR} \
	    ${MAKE_CMD} -C ${WRKSRC}/src install
	${STRIP_CMD} ${STAGEDIR}${LOCALBASE}/lib/vmd/*${VMD_ARCH} \
	    ${STAGEDIR}${LOCALBASE}/lib/vmd/plugins/${VMD_ARCH}/molfile/*.so
.for f in tcl/autopsf1.3/psfcheck.so tcl/hesstrans1.0/hesstrans.so \
	  tcl/mutator1.4/libalchemify.so tcl/pmepot1.0/libpmepot.so \
	  tcl/psfgen1.6/libpsfgen.so tcl/rnaview1.1/rnaview \
	  tcl/signalproc1.1/specden.so tcl/signalproc1.1/fftcmds.so \
	  tcl/signalproc1.1/sgsmooth.so tcl/volutil1.3/volutil \
	  tcl/clustalw1.1/clustalw tcl/libbiokit1.1/tcl_libbiokit.so \
	  tcl/libbiokit1.1/q tcl/libbiokit1.1/seqqr \
	  tcl/libbiokit1.1/structqr tcl/libbiokit1.1/qpair \
	  tcl/libbiokit1.1/rmsd tcl/libbiokit1.1/percid \
	  tcl/phylotree1.2/upgmaclu tcl/stamp1.2/stamp \
	  bin/catdcd4.0/catdcd bin/cionize1.0/cionize
	${STRIP_CMD} ${STAGEDIR}${LOCALBASE}/lib/vmd/plugins/${VMD_ARCH}/${f}
.endfor

.include <bsd.port.post.mk>




--- configure.orig	2012-02-02 16:53:54.000000000 +0900
+++ configure	2014-08-28 16:42:38.000000000 +0900
@@ -13,10 +13,10 @@
 $install_name = "vmd";
 

 
 NVCC        = $arch_nvcc
 NVCCFLAGS   = $arch_nvccflags -DARCH_$config_arch \$(DEFINES) \$(INCDIRS)
@@ -2997,38 +2997,38 @@
 	\$(COMPILERC) \$(RCFLAGS)
 
 install:
-	if [ ! -d "$install_library_dir" ]; then \\
-		\$(MAKEDIR) "$install_library_dir" ; \\
+	if [ ! -d "\${DESTDIR}$install_library_dir" ]; then \\
+		\$(MAKEDIR) "\${DESTDIR}$install_library_dir" ; \\
 	fi ; \\
-	if [ ! -d "$install_bin_dir" ]; then \\
-		\$(MAKEDIR) "$install_bin_dir" ; \\
+	if [ ! -d "\${DESTDIR}$install_bin_dir" ]; then \\
+		\$(MAKEDIR) "\${DESTDIR}$install_bin_dir" ; \\
 	fi ; \\
-	if [ ! -d "$install_library_dir"/doc ]; then \\
-		\$(MAKEDIR) "$install_library_dir"/doc; \\
+	if [ ! -d "\${DESTDIR}$install_library_dir"/doc ]; then \\
+		\$(MAKEDIR) "\${DESTDIR}$install_library_dir"/doc; \\
 	fi
-	-\$(COPY) ../Announcement  "$install_library_dir"
-	-\$(COPY) ../README        "$install_library_dir"
-	-\$(COPY) ../LICENSE       "$install_library_dir"
-	-\$(COPY) $vmd_doc_dir/ug.pdf        "$install_library_dir"/doc
-	if [ -f $install_library_dir/$config_progname ]; then \\
-           \$(MOVE) "$install_library_dir/$config_progname" "$install_library_dir/OLD_$config_progname" ; \$(DELETE) "$install_library_dir/OLD_$config_progname" ; fi
-	-\$(COPY) ../$config_arch/$config_progname "$install_library_dir"
+	-\$(COPY) ../Announcement  "\${DESTDIR}$install_library_dir"
+	-\$(COPY) ../README        "\${DESTDIR}$install_library_dir"
+	-\$(COPY) ../LICENSE       "\${DESTDIR}$install_library_dir"
+	-\$(COPY) $vmd_doc_dir/ug.pdf        "\${DESTDIR}$install_library_dir"/doc
+	if [ -f \${DESTDIR}$install_library_dir/$config_progname ]; then \\
+           \$(MOVE) "\${DESTDIR}$install_library_dir/$config_progname" "\${DESTDIR}$install_library_dir/OLD_$config_progname" ; \$(DELETE) "\${DESTDIR}$install_library_dir/OLD_$config_progname" ; fi
+	-\$(COPY) ../$config_arch/$config_progname "\${DESTDIR}$install_library_dir"
 	if [ -d "../lib/redistrib/lib_$config_arch" ]; then \\
 		\$(CD) ../lib/redistrib/lib_$config_arch; \$(TAR) -cf - ./* | \\
-		(cd "$install_library_dir" ; \$(TAR) -xf -) \\
+		(cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -) \\
 	fi ;
-	-\$(COPY) @vmd_other_exe "$install_library_dir"
+	-\$(COPY) @vmd_other_exe "\${DESTDIR}$install_library_dir"
 	-\$(CD) ..; \$(TAR) -cf - scripts | \\
-	(cd "$install_library_dir" ; \$(TAR) -xf -)
+	(cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
 	-\$(CD) $vmd_library_dir; \$(TAR) -cf - scripts | \\
-	(cd "$install_library_dir" ; \$(TAR) -xf -)
+	(cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
 	-\$(CD) ..; \$(TAR) -cf - python | \\
-	(cd "$install_library_dir"/scripts ; \$(TAR) -xf -)
+	(cd "\${DESTDIR}$install_library_dir"/scripts ; \$(TAR) -xf -)
 	-\$(CD) ..; \$(TAR) -cf - plugins | \\
-	(cd "$install_library_dir" ; \$(TAR) -xf -)
+	(cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
 	-\$(CD) ..; \$(TAR) -cf - shaders | \\
-	(cd "$install_library_dir" ; \$(TAR) -xf -)
-	-\$(COPY) ../data/.vmdrc ../data/.vmdsensors ../data/vmd_completion.dat "$install_library_dir"
+	(cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
+	-\$(COPY) ../data/.vmdrc ../data/.vmdsensors ../data/vmd_completion.dat "\${DESTDIR}$install_library_dir"
 	\$(CD) $vmd_bin_dir ; \\
 	if [ -f run_vmd_tmp ]; then \$(DELETE) run_vmd_tmp; fi ; \\
 	if [ ! -x "/bin/csh" ]; then \\
@@ -3044,7 +3044,7 @@
 		cat $vmd_bin_csh >> run_vmd_tmp ; \\
 	fi ; \\
 	chmod +x run_vmd_tmp ; \\
-	\$(COPY) run_vmd_tmp "$install_bin_dir"/$install_name ; \\
+	\$(COPY) run_vmd_tmp "\${DESTDIR}$install_bin_dir"/$install_name ; \\
 	\$(DELETE) run_vmd_tmp
 	\$(ECHO) Make sure "$install_bin_dir"/$install_name is in your path.
 	\$(ECHO) "VMD installation complete.  Enjoy!"

Return to bug 193090

Lines 40-46 Link Here

(-)vmd/Makefile (-3 / +17 lines)
40	#STRIDE_DIST= stride.tar.gz	40	#STRIDE_DIST= stride.tar.gz
41	STRIDE_DIST= Stride_src.tar.Z	41	STRIDE_DIST= Stride_src.tar.Z
42		42
43	NO_STAGE= yes
44	.include <bsd.port.pre.mk>	43	.include <bsd.port.pre.mk>
45		44
46	.if ${ARCH} == "amd64"	45	.if ${ARCH} == "amd64"
Lines 86-92 Link Here
86	${SETENV} ${MAKE_ENV} ${MAKE_CMD} -C ${WRKSRC}/lib/stride && ${MV} ${WRKSRC}/lib/stride/stride ${WRKSRC}/lib/stride/stride_${VMD_ARCH}	85	${SETENV} ${MAKE_ENV} ${MAKE_CMD} -C ${WRKSRC}/lib/stride && ${MV} ${WRKSRC}/lib/stride/stride ${WRKSRC}/lib/stride/stride_${VMD_ARCH}
87		86
88	do-install:	87	do-install:
89	${SETENV} ${MAKE_ENV} ${MAKE_CMD} -C ${WRKSRC}/src install	88	${SETENV} ${MAKE_ENV} DESTDIR=${STAGEDIR} \
90	@${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${PREFIX}/lib/vmd	89	${MAKE_CMD} -C ${WRKSRC}/src install
		90	${STRIP_CMD} ${STAGEDIR}${LOCALBASE}/lib/vmd/*${VMD_ARCH} \
		91	${STAGEDIR}${LOCALBASE}/lib/vmd/plugins/${VMD_ARCH}/molfile/*.so
		92	.for f in tcl/autopsf1.3/psfcheck.so tcl/hesstrans1.0/hesstrans.so \
		93	tcl/mutator1.4/libalchemify.so tcl/pmepot1.0/libpmepot.so \
		94	tcl/psfgen1.6/libpsfgen.so tcl/rnaview1.1/rnaview \
		95	tcl/signalproc1.1/specden.so tcl/signalproc1.1/fftcmds.so \
		96	tcl/signalproc1.1/sgsmooth.so tcl/volutil1.3/volutil \
		97	tcl/clustalw1.1/clustalw tcl/libbiokit1.1/tcl_libbiokit.so \
		98	tcl/libbiokit1.1/q tcl/libbiokit1.1/seqqr \
		99	tcl/libbiokit1.1/structqr tcl/libbiokit1.1/qpair \
		100	tcl/libbiokit1.1/rmsd tcl/libbiokit1.1/percid \
		101	tcl/phylotree1.2/upgmaclu tcl/stamp1.2/stamp \
		102	bin/catdcd4.0/catdcd bin/cionize1.0/cionize
		103	${STRIP_CMD} ${STAGEDIR}${LOCALBASE}/lib/vmd/plugins/${VMD_ARCH}/${f}
		104	.endfor
91		105
92	.include <bsd.port.post.mk>	106	.include <bsd.port.post.mk>

Lines 1-5 Link Here

(-)vmd/files/patch-configure (-2 / +71 lines)
1	--- configure.orig 2009-08-01 03:19:34.000000000 -0400	1	--- configure.orig 2012-02-02 16:53:54.000000000 +0900
2	+++ configure 2010-01-08 22:01:38.000000000 -0500	2	+++ configure 2014-08-28 16:42:38.000000000 +0900
3	@@ -13,10 +13,10 @@	3	@@ -13,10 +13,10 @@
4	$install_name = "vmd";	4	$install_name = "vmd";
5		5
Lines 37-39 Link Here
37		37
38	NVCC = $arch_nvcc	38	NVCC = $arch_nvcc
39	NVCCFLAGS = $arch_nvccflags -DARCH_$config_arch \$(DEFINES) \$(INCDIRS)	39	NVCCFLAGS = $arch_nvccflags -DARCH_$config_arch \$(DEFINES) \$(INCDIRS)
		40	@@ -2997,38 +2997,38 @@
		41	\$(COMPILERC) \$(RCFLAGS)
		42
		43	install:
		44	- if [ ! -d "$install_library_dir" ]; then \\
		45	- \$(MAKEDIR) "$install_library_dir" ; \\
		46	+ if [ ! -d "\${DESTDIR}$install_library_dir" ]; then \\
		47	+ \$(MAKEDIR) "\${DESTDIR}$install_library_dir" ; \\
		48	fi ; \\
		49	- if [ ! -d "$install_bin_dir" ]; then \\
		50	- \$(MAKEDIR) "$install_bin_dir" ; \\
		51	+ if [ ! -d "\${DESTDIR}$install_bin_dir" ]; then \\
		52	+ \$(MAKEDIR) "\${DESTDIR}$install_bin_dir" ; \\
		53	fi ; \\
		54	- if [ ! -d "$install_library_dir"/doc ]; then \\
		55	- \$(MAKEDIR) "$install_library_dir"/doc; \\
		56	+ if [ ! -d "\${DESTDIR}$install_library_dir"/doc ]; then \\
		57	+ \$(MAKEDIR) "\${DESTDIR}$install_library_dir"/doc; \\
		58	fi
		59	- -\$(COPY) ../Announcement "$install_library_dir"
		60	- -\$(COPY) ../README "$install_library_dir"
		61	- -\$(COPY) ../LICENSE "$install_library_dir"
		62	- -\$(COPY) $vmd_doc_dir/ug.pdf "$install_library_dir"/doc
		63	- if [ -f $install_library_dir/$config_progname ]; then \\
		64	- \$(MOVE) "$install_library_dir/$config_progname" "$install_library_dir/OLD_$config_progname" ; \$(DELETE) "$install_library_dir/OLD_$config_progname" ; fi
		65	- -\$(COPY) ../$config_arch/$config_progname "$install_library_dir"
		66	+ -\$(COPY) ../Announcement "\${DESTDIR}$install_library_dir"
		67	+ -\$(COPY) ../README "\${DESTDIR}$install_library_dir"
		68	+ -\$(COPY) ../LICENSE "\${DESTDIR}$install_library_dir"
		69	+ -\$(COPY) $vmd_doc_dir/ug.pdf "\${DESTDIR}$install_library_dir"/doc
		70	+ if [ -f \${DESTDIR}$install_library_dir/$config_progname ]; then \\
		71	+ \$(MOVE) "\${DESTDIR}$install_library_dir/$config_progname" "\${DESTDIR}$install_library_dir/OLD_$config_progname" ; \$(DELETE) "\${DESTDIR}$install_library_dir/OLD_$config_progname" ; fi
		72	+ -\$(COPY) ../$config_arch/$config_progname "\${DESTDIR}$install_library_dir"
		73	if [ -d "../lib/redistrib/lib_$config_arch" ]; then \\
		74	\$(CD) ../lib/redistrib/lib_$config_arch; \$(TAR) -cf - ./* \| \\
		75	- (cd "$install_library_dir" ; \$(TAR) -xf -) \\
		76	+ (cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -) \\
		77	fi ;
		78	- -\$(COPY) @vmd_other_exe "$install_library_dir"
		79	+ -\$(COPY) @vmd_other_exe "\${DESTDIR}$install_library_dir"
		80	-\$(CD) ..; \$(TAR) -cf - scripts \| \\
		81	- (cd "$install_library_dir" ; \$(TAR) -xf -)
		82	+ (cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
		83	-\$(CD) $vmd_library_dir; \$(TAR) -cf - scripts \| \\
		84	- (cd "$install_library_dir" ; \$(TAR) -xf -)
		85	+ (cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
		86	-\$(CD) ..; \$(TAR) -cf - python \| \\
		87	- (cd "$install_library_dir"/scripts ; \$(TAR) -xf -)
		88	+ (cd "\${DESTDIR}$install_library_dir"/scripts ; \$(TAR) -xf -)
		89	-\$(CD) ..; \$(TAR) -cf - plugins \| \\
		90	- (cd "$install_library_dir" ; \$(TAR) -xf -)
		91	+ (cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
		92	-\$(CD) ..; \$(TAR) -cf - shaders \| \\
		93	- (cd "$install_library_dir" ; \$(TAR) -xf -)
		94	- -\$(COPY) ../data/.vmdrc ../data/.vmdsensors ../data/vmd_completion.dat "$install_library_dir"
		95	+ (cd "\${DESTDIR}$install_library_dir" ; \$(TAR) -xf -)
		96	+ -\$(COPY) ../data/.vmdrc ../data/.vmdsensors ../data/vmd_completion.dat "\${DESTDIR}$install_library_dir"
		97	\$(CD) $vmd_bin_dir ; \\
		98	if [ -f run_vmd_tmp ]; then \$(DELETE) run_vmd_tmp; fi ; \\
		99	if [ ! -x "/bin/csh" ]; then \\
		100	@@ -3044,7 +3044,7 @@
		101	cat $vmd_bin_csh >> run_vmd_tmp ; \\
		102	fi ; \\
		103	chmod +x run_vmd_tmp ; \\
104	- \$(COPY) run_vmd_tmp "$install_bin_dir"/$install_name ; \\
105	+ \$(COPY) run_vmd_tmp "\${DESTDIR}$install_bin_dir"/$install_name ; \\
106	\$(DELETE) run_vmd_tmp
107	\$(ECHO) Make sure "$install_bin_dir"/$install_name is in your path.
108	\$(ECHO) "VMD installation complete. Enjoy!"