Attachment 172186 Details for Bug 210866 – svn diff to clean up math/R

[patch] svn diff to clean up math/R

R-3.3.1_2.diff (text/plain), 25.34 KB, created by Joseph Mingrone on 2016-07-07 07:48:11 UTC

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Creator: Joseph Mingrone

Created: 2016-07-07 07:48:11 UTC

Size: 25.34 KB

patch

obsolete

>Index: Makefile
>===================================================================
>--- Makefile	(revision 418164)
>+++ Makefile	(working copy)
>@@ -1,321 +1,208 @@
> # Created by: Maurice Castro <maurice@serc.rmit.edu.au>
> # $FreeBSD$
> 
>-PORTNAME?=	R
>-PORTVERSION=	3.3.1
>-PORTREVISION=	2
>-CATEGORIES=	math lang
>-MASTER_SITES=	http://cran.r-project.org/%SUBDIR%/ \
>-		ftp://cran.r-project.org/pub/R/%SUBDIR%/ \
>-		http://cran.at.r-project.org/%SUBDIR%/ \
>-		http://cran.au.r-project.org/%SUBDIR%/ \
>-		http://cran.br.r-project.org/%SUBDIR%/ \
>-		http://cran.ch.r-project.org/%SUBDIR%/ \
>-		http://cran.es.r-project.org/%SUBDIR%/ \
>-		http://cran.dk.r-project.org/%SUBDIR%/ \
>-		http://cran.uk.r-project.org/%SUBDIR%/ \
>-		http://cran.us.r-project.org/%SUBDIR%/ \
>-		ftp://ftp.u-aizu.ac.jp/pub/lang/R/CRAN/%SUBDIR%/ \
>-		http://lib.stat.cmu.edu/R/CRAN/%SUBDIR%/ \
>-		http://cran.stat.ucla.edu/%SUBDIR%/ \
>-		http://probability.ca/cran/%SUBDIR%/
>+PORTNAME=		R
>+PORTVERSION=		3.3.1
>+PORTREVISION=		2
>+CATEGORIES=		math lang
>+MASTER_SITES=		http://cran.r-project.org/%SUBDIR%/ \
>+			ftp://cran.r-project.org/pub/R/%SUBDIR%/ \
>+			http://cran.at.r-project.org/%SUBDIR%/ \
>+			http://cran.au.r-project.org/%SUBDIR%/ \
>+			http://cran.br.r-project.org/%SUBDIR%/ \
>+			http://cran.ch.r-project.org/%SUBDIR%/ \
>+			http://cran.es.r-project.org/%SUBDIR%/ \
>+			http://cran.dk.r-project.org/%SUBDIR%/ \
>+			http://cran.uk.r-project.org/%SUBDIR%/ \
>+			http://cran.us.r-project.org/%SUBDIR%/ \
>+			ftp://ftp.u-aizu.ac.jp/pub/lang/R/CRAN/%SUBDIR%/ \
>+			http://lib.stat.cmu.edu/R/CRAN/%SUBDIR%/ \
>+			http://cran.stat.ucla.edu/%SUBDIR%/ \
>+			http://probability.ca/cran/%SUBDIR%/
> MASTER_SITE_SUBDIR=	src/base/R-${PORTVERSION:C|\..*||}
> 
>-MAINTAINER=	jrm@ftfl.ca
>-COMMENT?=	Language for statistical computing and graphics
>+MAINTAINER=		jrm@ftfl.ca
>+COMMENT=		Language for statistical computing and graphics
> 
>-LICENSE=	GPLv2
>+LICENSE=		GPLv2
> 
>-BUILD_DEPENDS=		${LOCALBASE}/bin/gsed:textproc/gsed \
>-			texi2dvi:print/texinfo
> LIB_DEPENDS=		libcurl.so:ftp/curl \
> 			libpcre.so:devel/pcre
>+BUILD_DEPENDS=		texi2dvi:print/texinfo
> 
>-CONFIGURE_ENV=		LIBR_LDFLAGS="${LDFLAGS}" OBJC="${CC}" \
>-			SED="${LOCALBASE}/bin/gsed" \
>-			ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes
>+GNU_CONFIGURE=		yes
>+USES=			fortran iconv
>+USE_LDCONFIG=		${PREFIX}/lib/R/lib
> 
>-OPTIONS_DEFINE=		MISSING DOCS LTO OPENMP LONGDOUBLE
>+CONFIGURE_ARGS=		--disable-java --enable-memory-profiling \
>+			rdocdir=${DOCSDIR}
> 
>-MISSING_DESC=		use libmissing rather than libquadmath
>-LTO_DESC=		Try to produce faster code through LTO
>-LONGDOUBLE_DESC=	Enable use of long double data type
>-LTO_CONFIGURE_ENABLE=	lto
>-OPENMP_CONFIGURE_ENABLE=	openmp
>-LONGDOUBLE_CONFIGURE_ENABLE=	long-double
>-
>-OPTIONS_SINGLE=		BLAS
>-OPTIONS_SINGLE_BLAS=	RBLAS ATLAS OPENBLAS NETLIB
>-OPTIONS_DEFAULT=	OPENBLAS
>-
>-RBLAS_DESC=		Use internal blas implementation
>-
>-OPENBLAS_USES=		blaslapack:openblas
>-NETLIB_USES=		blaslapack:netlib
>-ATLAS_USES=		blaslapack:atlas
>-RBLAS_CONFIGURE_ON=	--without-blas --without-lapack
>-RBLAS_CONFIGURE_OFF=	--with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
>-			--with-lapack="${LAPACKLIB}"
>-
>-OPTIONS_SUB=		RBLAS
>-
>-.if defined(LIBRMATH_SLAVEPORT)
>-BUILD_WRKSRC=		${WRKSRC}/src/nmath/standalone
>-CONFIGURE_ARGS=		--disable-nls --with-ICU=no --with-cairo=no \
>-			--with-jpeglib=no --with-libpng=no --with-libtiff=no \
>-			--with-readline=no --with-tcltk=no --with-x=no \
>-			--without-libintl-prefix
>-CONFIGURE_ENV+=		ac_cv_header_iconv_h=no
>-PLIST_SUB=		RMATH_SOVERSION="${RMATH_SOVERSION}"
>-USE_LDCONFIG=		yes
>-.else # LIBRMATH_SLAVEPORT
>-ALL_TARGET=		all
> INSTALL_TARGET=		install-strip
>-CONFIGURE_ARGS=		--enable-memory-profiling rdocdir=${DOCSDIR} \
>-			--with-system-bzlib --with-system-zlib
>-CONFIGURE_ENV+=		FCFLAGS="${FFLAGS}" \
>-			R_LD_LIBRARY_PATH="${R_LD_LIBRARY_PATH}" TAR="${TAR}"
>+R_LD_LIBRARY_PATH=	${_GCC_RUNTIME}:${LOCALBASE}/lib
>+MAKE_JOBS_UNSAFE=	yes
> 
>-OPTIONS_DEFINE+=	ICU THREADS
>+OPTIONS_DEFINE=		DOCS ICU INFO LETTER LIBR LDOUBLE LTO MISSING NLS \
>+			OPENMP THREADS X11
> 
>-ICU_DESC=		Use ICU for collation in multibyte locales
>+OPTIONS_GROUP=		NEEDX11
>+OPTIONS_GROUP_NEEDX11=	GHOSTSCRIPT JPEG CAIROPANGO PDF PNG TCLTK TIFF
> 
>-OPTIONS_DEFAULT+=	ICU THREADS
>+OPTIONS_SINGLE=		BLAS
>+OPTIONS_SINGLE_BLAS=	ATLAS OPENBLAS NETLIB RBLAS
> 
>-.if !defined(LIBR_SLAVEPORT)
>-RUN_DEPENDS+=		${LOCALBASE}/bin/gsed:textproc/gsed
>-USE_LDCONFIG=		${PREFIX}/lib/R/lib
>-#now only used to build the R.1 manpage:
>-USES+=			perl5
>-USE_PERL5=		build
>+OPTIONS_SUB=		YES
> 
>-OPTIONS_DEFINE+=	GHOSTSCRIPT INFO_MANUALS JPEG LETTER_PAPER LIBR \
>-			PANGOCAIRO PDF_MANUALS PNG TCLTK TIFF X11
>+ATLAS_DESC=		ATLAS BLAS implementation
>+GHOSTSCRIPT_DESC=	Graphics Device for Bitmap Files via Ghostscript
>+CAIROPANGO_DESC=	Cairo graphics device and Pango multi-language text
>+INFO_DESC=		GNU info manuals
>+JPEG_DESC=		JPEG graphics device
>+LDOUBLE_DESC=		Enable long double data type
>+LETTER_DESC=		US Letter paper
>+LIBR_DESC=		Build dynamic (shared) R library
>+LTO_DESC=		Try to produce faster code through LTO
>+MISSING_DESC=		Use libmissing rather than libquadmath
>+NEEDX11_DESC=		X11-Implying Options
>+NETLIB_DESC=		Netlib BLAS implementation
>+OPENBLAS_DESC=		OpenBLAS BLAS implementation
>+PDF_DESC=		PDF manuals (requires TeX)
>+PNG_DESC=		PNG graphics device
>+RBLAS_DESC=		Use R-bundled BLAS implementation
>+X11_DESC=		X11 graphics device
> 
>-GHOSTSCRIPT_DESC=	[dev2]bitmap() graphics devices
>-INFO_MANUALS_DESC=	GNU info manuals
>-JPEG_DESC=		jpeg() graphics device
>-LETTER_PAPER_DESC=	US Letter paper
>-LIBR_DESC=		R shared library and a dynamically-linked R
>-PANGOCAIRO_DESC=	cairo and pango graphics support
>-PDF_MANUALS_DESC=	PDF manuals (requires TeX)
>-PNG_DESC=		png() graphics device
>-TCLTK_DESC=		tcltk package
>-X11_DESC=		X11() graphics device
>+OPTIONS_DEFAULT=	GHOSTSCRIPT ICU INFO JPEG LTO LIBR OPENBLAS OPENMP \
>+			CAIROPANGO PNG TCLTK TIFF THREADS X11
> 
>-OPTIONS_DEFAULT+=	GHOSTSCRIPT INFO_MANUALS JPEG LTO LIBR OPENMP \
>-			PANGOCAIRO PNG TCLTK TIFF X11
>-
> OPTIONS_DEFAULT_armv6+=		MISSING
> OPTIONS_DEFAULT_powerpc+=	MISSING
> OPTIONS_DEFAULT_powerpc64+=	MISSING
> OPTIONS_DEFAULT_sparc64+=	MISSING
> 
>-.endif # !LIBR_SLAVEPORT
>-PLIST_SUB=		R_SOVERSION="${R_SOVERSION}" \
>-			RBLAS_SOVERSION="${RBLAS_SOVERSION}" \
>-			RLAPACK_SOVERSION="${RLAPACK_SOVERSION}"
>-R_LD_LIBRARY_PATH=	${_GCC_RUNTIME}:${LOCALBASE}/lib
>-USES+=			iconv
>-.endif # LIBRMATH_SLAVEPORT
>-GNU_CONFIGURE=		yes
>-MAKE_JOBS_UNSAFE=	yes
>-R_SOVERSION=		1
>-RBLAS_SOVERSION=	2
>-RLAPACK_SOVERSION=	4
>-RMATH_SOVERSION=	0
>-USES+=			fortran
>+ATLAS_USES=		blaslapack:atlas
> 
>-.include "compiler.mk"
>-.include <bsd.port.options.mk>
>+GHOSTSCRIPT_IMPLIES=	X11
>+GHOSTSCRIPT_USES=	ghostscript
> 
>-.if ${ARCH} == "sparc64" || ${ARCH} == "powerpc64"
>-PICFLAG?=		-fPIC
>-.else
>-PICFLAG?=		-fpic
>-.endif
>-.for flag in LD CXXLD
>-CONFIGURE_ENV +=	SHLIB_${flag}FLAGS="${PICFLAG}"
>-.endfor
>+ICU_CONFIGURE_WITH=	ICU
>+ICU_LIB_DEPENDS=	libicui18n.so:devel/icu
> 
>-.if ${OSVERSION} > 1000052 && \
>-(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || ${ARCH} == sparc64)
>-.for _f in coshl erfcl erfl lgammal powl sinhl tanhl tgammal
>-CFLAGS+=	-fno-builtin-${_f}
>-LDFLAGS+=	-fno-builtin-${_f}
>-.endfor
>-.endif
>+INFO_IMPLIES=		DOCS
>+INFO_INSTALL_TARGET=	install-info
>+INFO_INFO=		R-FAQ R-admin R-data R-exts R-ints R-intro R-lang
> 
>-.if ${PORT_OPTIONS:MMISSING}
>-.for _f in acos asin atan cos cosh exp log pow sin sinh tan tanh
>-CONFIGURE_ENV+=		ac_cv_have_decl_c${_f}=yes
>-.endfor
>-LIB_DEPENDS+=		libmissing.so:math/libmissing
>-LIBM=			-L${LOCALBASE}/lib -lmissing -lm
>-LIBMH=			"missing_math.h"
>-.if defined(LIBRMATH_SLAVEPORT)
>-CPPFLAGS+=		-I${LOCALBASE}/include
>-.endif
>-.else
>-LIBM=			-lquadmath -lm
>-LIBMH=			<quadmath.h>
>-.endif
>+JPEG_IMPLIES=		X11
>+JPEG_CONFIGURE_WITH=	jpeglib
> 
>-.if !defined(LIBRMATH_SLAVEPORT)
>+LETTER_CONFIGURE_ENV=	R_PAPERSIZE=letter
> 
>-.if ${PORT_OPTIONS:MICU}
>-LIB_DEPENDS+=		libicui18n.so:devel/icu
>-CONFIGURE_ARGS+=	--with-ICU
>-.else
>-CONFIGURE_ARGS+=	--without-ICU
>-.endif
>+LIBR_CONFIGURE_ENABLE=	R-shlib
> 
>-.if ${PORT_OPTIONS:MNLS}
>-USES+=			gettext
>-PLIST_SUB+=		NLS=""
>-.else
>-CONFIGURE_ARGS+=	--disable-nls
>-PLIST_SUB+=		NLS="@comment "
>-.endif
>+LDOUBLE_CONFIGURE_ENABLE=long-double
> 
>-.if ${PORT_OPTIONS:MTHREADS}
>-CONFIGURE_ARGS+=	--enable-threads=posix
>-.else
>-CONFIGURE_ARGS+=	--disable-threads
>-.endif
>+LTO_CONFIGURE_ENABLE=	lto
> 
>-.if defined(LIBR_SLAVEPORT)
>+.for i in acos asin atan cos cosh exp log pow sin sinh tan tanh
>+MISSING_CONFIGURE_ENV+=	ac_cv_have_decl_c${i}=yes
>+.endfor
>+MISSING_LIB_DEPENDS=	libmissing.so:math/libmissing
>+MISSING_VARS=		LIBM="-L${LOCALBASE}/lib -lmissing -lm" \
>+			LIBMH=<missing_math.h>
>+MISSING_VARS_OFF=	LIBM='-lquadmath -lm' \
>+			LIBMH=<quadmath.h>
> 
>-CONFIGURE_ARGS+=	--disable-BLAS-shlib --without-pic --without-x
>-USES+=			readline
>+NETLIB_USES=		blaslapack:netlib
> 
>-.else # LIBR_SLAVEPORT
>+NLS_CONFIGURE_OFF=	--disable-nls
>+NLS_USES=		gettext
> 
>-.if ${PORT_OPTIONS:MGHOSTSCRIPT}
>-USES+=			ghostscript
>-.endif
>+OPENBLAS_USES=		blaslapack:openblas
> 
>-.if ${PORT_OPTIONS:MJPEG}
>-USES+=			jpeg
>-CONFIGURE_ARGS+=	--with-jpeglib
>-.else
>-CONFIGURE_ARGS+=	--without-jpeglib
>-.endif
>+OPENMP_CONFIGURE_ENABLE=openmp
> 
>-.if ${PORT_OPTIONS:MLETTER_PAPER}
>-CONFIGURE_ENV +=	R_PAPERSIZE=letter
>-.endif
>+CAIROPANGO_IMPLIES=	X11
>+CAIROPANGO_CONFIGURE_WITH=cairo
>+CAIROPANGO_USES=	gettext jpeg pkgconfig
>+CAIROPANGO_USE=		gnome=pango,cairo
> 
>-.if ${PORT_OPTIONS:MLIBR}
>-CONFIGURE_ARGS+=	--enable-R-shlib
>-PLIST_SUB+=		LIBR=""
>-.else
>-PLIST_SUB+=		LIBR="@comment "
>-.endif
>+PDF_IMPLIES=		DOCS X11
>+PDF_USE=		tex=dvipsk:build,kpathsea:build,pdftex:build
>+PDF_ALL_TARGET=		pdf
>+PDF_INSTALL_TARGET=	install-pdf
>+.for i in KPSEWHICH MAKEINDEX PDFLATEX PDFTEX TEX TEXI2DVI
>+PDF_CONFIGURE_ENV_OFF+=	ac_cv_path_${i}=""
>+.endfor
> 
>-.if ${PORT_OPTIONS:MPANGOCAIRO}
>-USES+=			pkgconfig
>-USE_GNOME+=		pango cairo
>-PLIST_SUB+=		PANGOCAIRO=""
>-.else
>-CONFIGURE_ARGS+=	--without-cairo
>-PLIST_SUB+=		PANGOCAIRO="@comment "
>-.endif
>+PNG_IMPLIES=		X11
>+PNG_LIB_DEPENDS=	libpng.so:graphics/png
>+PNG_CONFIGURE_WITH=	libpng
> 
>-.if ${PORT_OPTIONS:MPNG}
>-LIB_DEPENDS+=		libpng.so:graphics/png
>-CONFIGURE_ARGS+=	--with-libpng
>-.else
>-CONFIGURE_ARGS+=	--without-libpng
>-.endif
>+RBLAS_CONFIGURE_ON=	--without-blas \
>+			--without-lapack
>+RBLAS_CONFIGURE_OFF=	--with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
>+			--with-lapack="${LAPACKLIB}"
> 
>-.if ${PORT_OPTIONS:MTCLTK}
>-USES+=			tk:84+
>-CONFIGURE_ARGS+=	--with-tcltk \
>-			--with-tcl-config=${TCL_LIBDIR}/tclConfig.sh \
>-			--with-tk-config=${TK_LIBDIR}/tkConfig.sh
>-PLIST_SUB+=		TCLTK=""
>-.else
>-CONFIGURE_ARGS+=	--without-tcltk
>-PLIST_SUB+=		TCLTK="@comment "
>-.endif
>+TCLTK_IMPLIES=		X11
>+TCLTK_USES=		tcl tk:84+
>+TCLTK_CONFIGURE_WITH=	tcltk
> 
>-.if ${PORT_OPTIONS:MTIFF}
>-LIB_DEPENDS+=		libtiff.so:graphics/tiff
>-CONFIGURE_ARGS+=	--with-libtiff
>-.else
>-CONFIGURE_ARGS+=	--without-libtiff
>-.endif
>+THREADS_CONFIGURE_ON=	--enable-threads=posix
>+THREADS_CONFIGURE_OFF=	--disable-threads
> 
>-.if ${PORT_OPTIONS:MX11}
>-CONFIGURE_ARGS+=	--with-x
>-USE_XORG=		ice sm x11 xext xmu xscrnsaver xt
>-PLIST_SUB+=		X11=""
>-.else
>-CONFIGURE_ARGS+=	--without-x
>-PLIST_SUB+=		X11="@comment "
>-.endif
>+TIFF_IMPLIES=		X11
>+TIFF_LIB_DEPENDS=	libtiff.so:graphics/tiff
>+TIFF_CONFIGURE_WITH=	libtiff
> 
>-.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
>-ALL_TARGET+=	info
>-CONFIGURE_ENV+=	INSTALL_INFO="${LOCALBASE}/bin/install-info" \
>-		MAKEINFO="${LOCALBASE}/bin/makeinfo"
>-INFO=		R-FAQ R-admin R-data R-exts R-intro R-lang
>-.endif
>+X11_CONFIGURE_WITH=	x
>+X11_USE=		xorg=ice,sm,x11,xext,xmu,xscrnsaver,xt
> 
>-.if ${PORT_OPTIONS:MPDF_MANUALS} && ${PORT_OPTIONS:MDOCS}
>-USE_TEX=		texlive dvipsk kpathsea pdftex
>-#BUILD_DEPENDS +=	texi2dvi:print/texinfo
>-ALL_TARGET+=		pdf
>-CONFIGURE_ENV +=	INSTALL_INFO="${LOCALBASE}/bin/install-info" \
>-			MAKEINFO="${LOCALBASE}/bin/makeinfo"
>-INSTALL_TARGET+=	install-pdf
>-PLIST_SUB+=		PDF_MANUAL=""
>-.else
>-.for _b in KPSEWHICH MAKEINDEX PDFLATEX PDFTEX TEX TEXI2DVI
>-CONFIGURE_ENV+=		ac_cv_path_${_b}=""
>+.include "compiler.mk"
>+.include <bsd.port.options.mk>
>+
>+.if ${OSVERSION} > 1000052 && \
>+(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || \
>+${ARCH} == sparc64)
>+.for i in coshl erfcl erfl lgammal powl sinhl tanhl tgammal
>+CFLAGS+=		-fno-builtin-${i}
>+LDFLAGS+=		-fno-builtin-${i}
> .endfor
>-PLIST_SUB+=		PDF_MANUAL="@comment "
> .endif
>-.endif # LIBR_SLAVEPORT
>-.endif # !LIBRMATH_SLAVEPORT
> 
> post-patch:
>-	@${REINPLACE_CMD} -e '\|LIBS=|s|-lrt ||' \
>-		-e '\|-lm[". ]|s|-lm|${LIBM}|' \
>-		${WRKSRC}/configure
> .if !${PORT_OPTIONS:MMISSING}
> .if ${OSVERSION} < 1000016
>-	@${REINPLACE_CMD} -e 's/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \
>-		${WRKSRC}/src/nmath/pnchisq.c\
>+	@${REINPLACE_CMD} -e \
>+'s/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \
>+		${WRKSRC}/src/nmath/pnchisq.c \
> 		${WRKSRC}/src/nmath/pgamma.c
>-	@${REINPLACE_CMD} -e 's/# define LOG logl/# define LOG(x) (long double)logq((__float128)(x))/' \
>-		${WRKSRC}/src/nmath/pnchisq.c\
>+	@${REINPLACE_CMD} -e \
>+'s/# define LOG logl/# define LOG(x) (long double)logq((__float128)(x))/' \
>+		${WRKSRC}/src/nmath/pnchisq.c \
> 		${WRKSRC}/src/nmath/pgamma.c
>-
> .endif
> .if ${OSVERSION} < 1000034
>-	@${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/' \
>+	@${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/'\
> 		${WRKSRC}/src/nmath/dnbeta.c \
> 		${WRKSRC}/src/nmath/pnbeta.c
> .endif
>-	@${REINPLACE_CMD} -Ee 's/powl\((.*)(long double)/(long double)powq((__float128)\1__float128/' \
>+	@${REINPLACE_CMD} -Ee \
>+'s/powl\((.*)(long double)/(long double)powq((__float128)\1__float128/' \
> 		${WRKSRC}/src/main/format.c
>-.else
>+.else # !PORT_OPTIONS:MMISSING
> .if ${OSVERSION} > 1000052 && \
>-(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || ${ARCH} == sparc64)
>+(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || \
>+${ARCH} == sparc64)
> 	@${REINPLACE_CMD} -e '\|^FLIBS="$$ac_cv_f77_libs"|s|"|&${LIBM} |' \
> 		${WRKSRC}/configure
> .endif
> 	@${REINPLACE_CMD} -e \
>-	'\|#[[:blank:]]*include[[:blank:]]*<complex.h>|{x;s|^.*$$|#include "missing_complex.h"|;H;x;}' \
>+'\|#[[:blank:]]*include[[:blank:]]*<complex.h>|{x;s|^.*$$|#include "missing_complex.h"|;H;x;}' \
> 		${WRKSRC}/src/main/complex.c
>-.endif
>+.endif # !PORT_OPTIONS:MMISSING
> 	@${REINPLACE_CMD} -e \
>-	'\|#[[:blank:]]*include[[:blank:]]*<math.h>|{x;s|^.*$$|#include ${LIBMH}|;H;x;}' \
>+'\|#[[:blank:]]*include[[:blank:]]*<math.h>|{x;s|^.*$$|#include ${LIBMH}|;H;x;}'\
> 		${WRKSRC}/src/nmath/nmath.h \
> 		${WRKSRC}/src/include/Rmath.h0.in
>-	@${REINPLACE_CMD} -e 's|(libdir)/pkgconfig|(prefix)/libdata/pkgconfig|g' \
>+	@${REINPLACE_CMD} -e 's|(libdir)/pkgconfig|(prefix)/libdata/pkgconfig|g'\
> 		${WRKSRC}/src/nmath/standalone/Makefile.in \
> 		${WRKSRC}/src/unix/Makefile.in
> 	@${REINPLACE_CMD} -e "s|/usr/local|${LOCALBASE}|g" \
>@@ -322,82 +209,13 @@
> 		${WRKSRC}/configure \
> 		${WRKSRC}/src/library/profile/Rprofile.unix \
> 		${WRKSRC}/src/scripts/javareconf.in
>-.if !defined(LIBRMATH_SLAVEPORT)
>-.if !${PORT_OPTIONS:MNLS}
>-	@(cd ${WRKSRC}/src/library/Recommended; \
>-	for tarfile in *.tgz *.tar.gz ; do \
>-	${TAR} -czf temptgz --exclude='*/po/*' @$$tarfile ; \
>-	${MV} temptgz $$tarfile ; \
>-	done)
>-	@${REINPLACE_CMD} -e '/ls -d $$srcdir\/inst/d' \
>-		${WRKSRC}/src/library/translations/Makefile.in
>-.endif
> 
> .if !${PORT_OPTIONS:MMISSING}
> pre-configure:
> 	@if [ ! -f ${_GCC_RUNTIME}/libquadmath.a ] ; then \
>-	${PRINTF} "\n\n\n%s\n\n\n" "libquadmath is not available for your\
>-	compiler and architecture: please enable the MISSING option." ; \
>-	exit 1 ; fi
>+		IGNORE="\n\n\n%s\n\n\n" "libquadmath is not available for your\
>+		compiler and architecture: please enable the MISSING option."; \
>+	fi
> .endif
> 
>-.if defined(LIBR_SLAVEPORT)
>-do-build:
>-.for d in include extra
>-	@(cd ${WRKSRC}/src/${d}; ${SETENV} ${MAKE_ENV} ${MAKE} ${_MAKE_JOBS} \
>-	${MAKE_ARGS} R)
>-.endfor
>-	@(cd ${WRKSRC}/src/main; ${SETENV} ${MAKE_ENV} ${MAKE} ${_MAKE_JOBS} \
>-	${MAKE_ARGS} Makefile Makedeps libR.a)
>-
>-do-install:
>-	@${MKDIR} ${STAGEDIR}${PREFIX}/lib/R/lib
>-	${INSTALL_DATA} ${WRKSRC}/src/main/libR.a ${STAGEDIR}${PREFIX}/lib/R/lib
>-
>-.else # LIBR_SLAVEPORT
>-
>-pre-configure-script:
>-	@${FIND} ${WRKSRC} $ -name '*.orig' -o -name '*.bak' $ -delete
>-
>-check regression-test test: build
>-	@(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
>-	LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} \
>-	check)
>-
>-check-all: build
>-	@(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
>-	LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} \
>-	check-all)
>-
>-post-install:
>-.for L in R Rblas Rlapack
>-	@if [ -d ${STAGEDIR}${PREFIX}/lib/R/lib ] ; then \
>-	cd ${STAGEDIR}${PREFIX}/lib/R/lib; if [ -f lib${L}.so ] ; then \
>-	${LN} -sf lib${L}.so lib${L}.so.${${L:tu}_SOVERSION} ; fi; fi
>-.endfor
>-.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
>-	@(cd ${WRKSRC}/doc/manual; \
>-	for infofile in ${INFO}; do \
>-		${INSTALL_DATA} $${infofile}.info* ${STAGEDIR}${PREFIX}/${INFO_PATH}/; \
>-	done)
>-.endif
>-
>-	${FIND} ${STAGEDIR}${PREFIX}/lib/ -name "*.so" | ${XARGS} ${STRIP_CMD}
>-
>-.endif # LIBR_SLAVEPORT
>-.else # !LIBRMATH_SLAVEPORT
>-do-install:
>-	${INSTALL_DATA} ${WRKSRC}/src/include/Rmath.h ${STAGEDIR}${PREFIX}/include
>-	${INSTALL_DATA} ${BUILD_WRKSRC}/libRmath.a ${STAGEDIR}${PREFIX}/lib
>-	${INSTALL_LIB} ${BUILD_WRKSRC}/libRmath.so \
>-	${STAGEDIR}${PREFIX}/lib/libRmath.so.${RMATH_SOVERSION}
>-	@(cd ${STAGEDIR}${PREFIX}/lib; ${LN} -sf libRmath.so.${RMATH_SOVERSION} libRmath.so)
>-
>-check regression-test test: build
>-	@(cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
>-	LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} test; \
>-	${SETENV} LD_LIBRARY_PATH="${BUILD_WRKSRC}" ${BUILD_WRKSRC}/test)
>-
>-.endif # !LIBRMATH_SLAVEPORT
>-
> .include <bsd.port.mk>
>Index: pkg-plist
>===================================================================
>--- pkg-plist	(revision 418164)
>+++ pkg-plist	(working copy)
>@@ -100,11 +100,8 @@
> lib/R/include/Rversion.h
> lib/R/include/S.h
> %%RBLAS%%lib/R/lib/libRblas.so
>-%%RBLAS%%lib/R/lib/libRblas.so.%%RBLAS_SOVERSION%%
> %%RBLAS%%lib/R/lib/libRlapack.so
>-%%RBLAS%%lib/R/lib/libRlapack.so.%%RLAPACK_SOVERSION%%
> %%LIBR%%lib/R/lib/libR.so
>-%%LIBR%%lib/R/lib/libR.so.%%R_SOVERSION%%
> lib/R/library/KernSmooth/DESCRIPTION
> lib/R/library/KernSmooth/INDEX
> lib/R/library/KernSmooth/Meta/Rd.rds
>@@ -585,7 +582,7 @@
> lib/R/library/grDevices/html/R.css
> lib/R/library/grDevices/icc/srgb
> lib/R/library/grDevices/icc/srgb.flate
>-%%PANGOCAIRO%%lib/R/library/grDevices/libs/cairo.so
>+%%CAIROPANGO%%lib/R/library/grDevices/libs/cairo.so
> lib/R/library/grDevices/libs/grDevices.so
> lib/R/library/graphics/DESCRIPTION
> lib/R/library/graphics/INDEX
>@@ -628,51 +625,51 @@
> lib/R/library/grid/Meta/links.rds
> lib/R/library/grid/Meta/nsInfo.rds
> lib/R/library/grid/Meta/package.rds
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/Meta/vignette.rds
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/Meta/vignette.rds
> lib/R/library/grid/NAMESPACE
> lib/R/library/grid/R/grid
> lib/R/library/grid/R/grid.rdb
> lib/R/library/grid/R/grid.rdx
> lib/R/library/grid/doc/changes.txt
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/displaylist.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/displaylist.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/displaylist.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/displaylist.Rnw
> lib/R/library/grid/doc/displaylist.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/frame.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/frame.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/frame.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/frame.Rnw
> lib/R/library/grid/doc/frame.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/grid.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/grid.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/grid.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/grid.Rnw
> lib/R/library/grid/doc/grid.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/grobs.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/grobs.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/grobs.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/grobs.Rnw
> lib/R/library/grid/doc/grobs.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/index.html
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/interactive.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/interactive.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/index.html
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/interactive.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/interactive.Rnw
> lib/R/library/grid/doc/interactive.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/locndimn.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/locndimn.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/locndimn.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/locndimn.Rnw
> lib/R/library/grid/doc/locndimn.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/moveline.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/moveline.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/moveline.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/moveline.Rnw
> lib/R/library/grid/doc/moveline.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/nonfinite.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/nonfinite.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/nonfinite.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/nonfinite.Rnw
> lib/R/library/grid/doc/nonfinite.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/plotexample.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/plotexample.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/plotexample.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/plotexample.Rnw
> lib/R/library/grid/doc/plotexample.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/rotated.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/rotated.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/rotated.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/rotated.Rnw
> lib/R/library/grid/doc/rotated.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/saveload.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/saveload.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/saveload.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/saveload.Rnw
> lib/R/library/grid/doc/saveload.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/sharing.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/sharing.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/sharing.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/sharing.Rnw
> lib/R/library/grid/doc/sharing.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/viewports.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/grid/doc/viewports.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/viewports.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/grid/doc/viewports.Rnw
> lib/R/library/grid/doc/viewports.pdf
> lib/R/library/grid/help/AnIndex
> lib/R/library/grid/help/aliases.rds
>@@ -849,14 +846,14 @@
> lib/R/library/parallel/Meta/links.rds
> lib/R/library/parallel/Meta/nsInfo.rds
> lib/R/library/parallel/Meta/package.rds
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/parallel/Meta/vignette.rds
>+%%PORTDOCS%%%%PDF%%lib/R/library/parallel/Meta/vignette.rds
> lib/R/library/parallel/NAMESPACE
> lib/R/library/parallel/R/parallel
> lib/R/library/parallel/R/parallel.rdb
> lib/R/library/parallel/R/parallel.rdx
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/parallel/doc/index.html
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/parallel/doc/parallel.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/parallel/doc/parallel.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/parallel/doc/index.html
>+%%PORTDOCS%%%%PDF%%lib/R/library/parallel/doc/parallel.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/parallel/doc/parallel.Rnw
> lib/R/library/parallel/doc/parallel.pdf
> lib/R/library/parallel/help/AnIndex
> lib/R/library/parallel/help/aliases.rds
>@@ -1415,7 +1412,7 @@
> lib/R/library/utils/Meta/links.rds
> lib/R/library/utils/Meta/nsInfo.rds
> lib/R/library/utils/Meta/package.rds
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/utils/Meta/vignette.rds
>+%%PORTDOCS%%%%PDF%%lib/R/library/utils/Meta/vignette.rds
> lib/R/library/utils/NAMESPACE
> lib/R/library/utils/R/sysdata.rdb
> lib/R/library/utils/R/sysdata.rdx
>@@ -1424,10 +1421,10 @@
> lib/R/library/utils/R/utils.rdx
> lib/R/library/utils/Sweave/Sweave-test-1.Rnw
> lib/R/library/utils/Sweave/example-1.Rnw
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/utils/doc/Sweave.R
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/utils/doc/Sweave.Rnw
>+%%PORTDOCS%%%%PDF%%lib/R/library/utils/doc/Sweave.R
>+%%PORTDOCS%%%%PDF%%lib/R/library/utils/doc/Sweave.Rnw
> lib/R/library/utils/doc/Sweave.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%lib/R/library/utils/doc/index.html
>+%%PORTDOCS%%%%PDF%%lib/R/library/utils/doc/index.html
> lib/R/library/utils/help/AnIndex
> lib/R/library/utils/help/aliases.rds
> lib/R/library/utils/help/paths.rds
>@@ -1492,14 +1489,14 @@
> %%DOCSDIR%%/html/NEWS.2.html
> %%PORTDOCS%%%%DOCSDIR%%/html/Rlogo.pdf
> %%PORTDOCS%%%%DOCSDIR%%/html/Rlogo.svg
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-FAQ.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-admin.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-data.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-exts.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-intro.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-ints.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-lang.pdf
>-%%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/fullrefman.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-FAQ.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-admin.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-data.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-exts.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-intro.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-ints.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/R-lang.pdf
>+%%PORTDOCS%%%%PDF%%%%DOCSDIR%%/manual/fullrefman.pdf
> %%PORTDOCS%%%%DOCSDIR%%/BioC_mirrors.csv
> %%PORTDOCS%%%%DOCSDIR%%/NEWS
> %%PORTDOCS%%%%DOCSDIR%%/NEWS.0

Flags:

jrm: maintainer-approval+

Actions: View | Diff

Attachments on bug 210866: 172160 | 172173 | 172176 | 172186 | 172210 | 172280 | 172288 | 172290