View | Details | Raw Unified | Return to bug 212682 | Differences between
and this patch

Collapse All | Expand All

(-)seqan/Makefile (-2 / +1 lines)
Lines 2-9 Link Here
2
# $FreeBSD: head/biology/seqan/Makefile 415945 2016-05-27 16:10:36Z amdmi3 $
2
# $FreeBSD: head/biology/seqan/Makefile 415945 2016-05-27 16:10:36Z amdmi3 $
3
3
4
PORTNAME=	seqan
4
PORTNAME=	seqan
5
PORTVERSION=	2.1.1
5
PORTVERSION=	2.2.0
6
PORTREVISION=	1
7
CATEGORIES=	biology
6
CATEGORIES=	biology
8
MASTER_SITES=	http://packages.seqan.de/seqan-library/
7
MASTER_SITES=	http://packages.seqan.de/seqan-library/
9
DISTNAME=	${PORTNAME}-library-${PORTVERSION}
8
DISTNAME=	${PORTNAME}-library-${PORTVERSION}
(-)seqan/distinfo (-2 / +3 lines)
Lines 1-2 Link Here
1
SHA256 (seqan-library-2.1.1.tar.xz) = 8926f91fec5ce57e8efc70ac16cbf041bde0e0be463685b86e0d2e1e6a8169d7
1
TIMESTAMP = 1473846790
2
SIZE (seqan-library-2.1.1.tar.xz) = 5238884
2
SHA256 (seqan-library-2.2.0.tar.xz) = b5c036a3d2fc2fe5f2d57dcd4d7c523a6df146ab7b44bc789f42004b058d72fd
3
SIZE (seqan-library-2.2.0.tar.xz) = 5223004
(-)seqan/pkg-plist (-20 / +30 lines)
Lines 2-13 Link Here
2
include/seqan/align/align_base.h
2
include/seqan/align/align_base.h
3
include/seqan/align/align_cols.h
3
include/seqan/align/align_cols.h
4
include/seqan/align/align_config.h
4
include/seqan/align/align_config.h
5
include/seqan/align/align_interface_wrapper.h
5
include/seqan/align/align_iterator_base.h
6
include/seqan/align/align_iterator_base.h
6
include/seqan/align/align_metafunctions.h
7
include/seqan/align/align_metafunctions.h
7
include/seqan/align/align_traceback.h
8
include/seqan/align/align_traceback.h
8
include/seqan/align/alignment_algorithm_tags.h
9
include/seqan/align/alignment_algorithm_tags.h
9
include/seqan/align/alignment_operations.h
10
include/seqan/align/alignment_operations.h
10
include/seqan/align/dp_algorithm_impl.h
11
include/seqan/align/dp_algorithm_impl.h
12
include/seqan/align/dp_align_simd_helper.h
11
include/seqan/align/dp_band.h
13
include/seqan/align/dp_band.h
12
include/seqan/align/dp_cell.h
14
include/seqan/align/dp_cell.h
13
include/seqan/align/dp_cell_affine.h
15
include/seqan/align/dp_cell_affine.h
Lines 27-32 Link Here
27
include/seqan/align/dp_meta_info.h
29
include/seqan/align/dp_meta_info.h
28
include/seqan/align/dp_profile.h
30
include/seqan/align/dp_profile.h
29
include/seqan/align/dp_scout.h
31
include/seqan/align/dp_scout.h
32
include/seqan/align/dp_scout_simd.h
30
include/seqan/align/dp_setup.h
33
include/seqan/align/dp_setup.h
31
include/seqan/align/dp_trace_segment.h
34
include/seqan/align/dp_trace_segment.h
32
include/seqan/align/dp_traceback_adaptor.h
35
include/seqan/align/dp_traceback_adaptor.h
Lines 336-341 Link Here
336
include/seqan/index/find_quasar.h
339
include/seqan/index/find_quasar.h
337
include/seqan/index/find_swift.h
340
include/seqan/index/find_swift.h
338
include/seqan/index/index_base.h
341
include/seqan/index/index_base.h
342
include/seqan/index/index_bidirectional.h
343
include/seqan/index/index_bidirectional_stree.h
344
include/seqan/index/index_bifm.h
345
include/seqan/index/index_bifm_stree.h
339
include/seqan/index/index_bwt.h
346
include/seqan/index/index_bwt.h
340
include/seqan/index/index_childtab.h
347
include/seqan/index/index_childtab.h
341
include/seqan/index/index_device.h
348
include/seqan/index/index_device.h
Lines 348-354 Link Here
348
include/seqan/index/index_fm.h
355
include/seqan/index/index_fm.h
349
include/seqan/index/index_fm_compressed_sa.h
356
include/seqan/index/index_fm_compressed_sa.h
350
include/seqan/index/index_fm_compressed_sa_iterator.h
357
include/seqan/index/index_fm_compressed_sa_iterator.h
351
include/seqan/index/index_fm_device.h
352
include/seqan/index/index_fm_dox.h
358
include/seqan/index/index_fm_dox.h
353
include/seqan/index/index_fm_lf_table.h
359
include/seqan/index/index_fm_lf_table.h
354
include/seqan/index/index_fm_rank_dictionary_base.h
360
include/seqan/index/index_fm_rank_dictionary_base.h
Lines 444-450 Link Here
444
include/seqan/misc/base.h
450
include/seqan/misc/base.h
445
include/seqan/misc/bit_twiddling.h
451
include/seqan/misc/bit_twiddling.h
446
include/seqan/misc/bit_twiddling_functors.h
452
include/seqan/misc/bit_twiddling_functors.h
447
include/seqan/misc/cuda.h
448
include/seqan/misc/dequeue.h
453
include/seqan/misc/dequeue.h
449
include/seqan/misc/edit_environment.h
454
include/seqan/misc/edit_environment.h
450
include/seqan/misc/interval_tree.h
455
include/seqan/misc/interval_tree.h
Lines 464-469 Link Here
464
include/seqan/modifier/modifier_cyclic_shape.h
469
include/seqan/modifier/modifier_cyclic_shape.h
465
include/seqan/modifier/modifier_functors.h
470
include/seqan/modifier/modifier_functors.h
466
include/seqan/modifier/modifier_iterator.h
471
include/seqan/modifier/modifier_iterator.h
472
include/seqan/modifier/modifier_padding.h
467
include/seqan/modifier/modifier_position.h
473
include/seqan/modifier/modifier_position.h
468
include/seqan/modifier/modifier_reverse.h
474
include/seqan/modifier/modifier_reverse.h
469
include/seqan/modifier/modifier_shortcuts.h
475
include/seqan/modifier/modifier_shortcuts.h
Lines 505-514 Link Here
505
include/seqan/pipe/pool_mapper.h
511
include/seqan/pipe/pool_mapper.h
506
include/seqan/pipe/pool_sorter.h
512
include/seqan/pipe/pool_sorter.h
507
include/seqan/platform.h
513
include/seqan/platform.h
508
include/seqan/platform/platform_gcc.h
509
include/seqan/platform/platform_icc.h
510
include/seqan/platform/platform_nvcc.h
511
include/seqan/platform/platform_windows.h
512
include/seqan/random.h
514
include/seqan/random.h
513
include/seqan/random/random_base.h
515
include/seqan/random/random_base.h
514
include/seqan/random/random_beta.h
516
include/seqan/random/random_beta.h
Lines 536-542 Link Here
536
include/seqan/score/score_edit.h
538
include/seqan/score/score_edit.h
537
include/seqan/score/score_matrix.h
539
include/seqan/score/score_matrix.h
538
include/seqan/score/score_matrix_data.h
540
include/seqan/score/score_matrix_data.h
541
include/seqan/score/score_matrix_dyn.h
539
include/seqan/score/score_matrix_io.h
542
include/seqan/score/score_matrix_io.h
543
include/seqan/score/score_simd_wrapper.h
540
include/seqan/score/score_simple.h
544
include/seqan/score/score_simple.h
541
include/seqan/seeds.h
545
include/seqan/seeds.h
542
include/seqan/seeds/banded_chain_alignment.h
546
include/seqan/seeds/banded_chain_alignment.h
Lines 569-575 Link Here
569
include/seqan/sequence.h
573
include/seqan/sequence.h
570
include/seqan/sequence/adapt_array_pointer.h
574
include/seqan/sequence/adapt_array_pointer.h
571
include/seqan/sequence/adapt_stl_container.h
575
include/seqan/sequence/adapt_stl_container.h
572
include/seqan/sequence/adapt_thrust_vector.h
573
include/seqan/sequence/container_view.h
576
include/seqan/sequence/container_view.h
574
include/seqan/sequence/container_view_zip.h
577
include/seqan/sequence/container_view_zip.h
575
include/seqan/sequence/iter_concat_virtual.h
578
include/seqan/sequence/iter_concat_virtual.h
Lines 594-600 Link Here
594
include/seqan/sequence/string_set_concat_direct.h
597
include/seqan/sequence/string_set_concat_direct.h
595
include/seqan/sequence/string_set_dependent_generous.h
598
include/seqan/sequence/string_set_dependent_generous.h
596
include/seqan/sequence/string_set_dependent_tight.h
599
include/seqan/sequence/string_set_dependent_tight.h
597
include/seqan/sequence/string_set_device.h
598
include/seqan/sequence/string_set_owner.h
600
include/seqan/sequence/string_set_owner.h
599
include/seqan/sequence/string_set_segment.h
601
include/seqan/sequence/string_set_segment.h
600
include/seqan/sequence/string_set_view.h
602
include/seqan/sequence/string_set_view.h
Lines 649-660 Link Here
649
include/seqan/system/file_forwards.h
651
include/seqan/system/file_forwards.h
650
include/seqan/system/file_sync.h
652
include/seqan/system/file_sync.h
651
include/seqan/system/system_base.h
653
include/seqan/system/system_base.h
652
include/seqan/system/system_condition.h
654
include/seqan/system/system_event_win.h
653
include/seqan/system/system_critical_section.h
654
include/seqan/system/system_event.h
655
include/seqan/system/system_forwards.h
655
include/seqan/system/system_forwards.h
656
include/seqan/system/system_mutex.h
657
include/seqan/system/system_thread.h
658
include/seqan/tabix_io.h
656
include/seqan/tabix_io.h
659
include/seqan/tabix_io/tabix_index_tbi.h
657
include/seqan/tabix_io/tabix_index_tbi.h
660
include/seqan/translation.h
658
include/seqan/translation.h
Lines 705-710 Link Here
705
%%PORTDOCS%%%%DOCSDIR%%/html/class_BedRecord.html
703
%%PORTDOCS%%%%DOCSDIR%%/html/class_BedRecord.html
706
%%PORTDOCS%%%%DOCSDIR%%/html/class_BedRgb.html
704
%%PORTDOCS%%%%DOCSDIR%%/html/class_BedRgb.html
707
%%PORTDOCS%%%%DOCSDIR%%/html/class_BetaDistribution.html
705
%%PORTDOCS%%%%DOCSDIR%%/html/class_BetaDistribution.html
706
%%PORTDOCS%%%%DOCSDIR%%/html/class_BidirectionalIndex.html
708
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastIOContext.html
707
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastIOContext.html
709
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastMatch.html
708
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastMatch.html
710
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastMatchField.html
709
%%PORTDOCS%%%%DOCSDIR%%/html/class_BlastMatchField.html
Lines 805-810 Link Here
805
%%PORTDOCS%%%%DOCSDIR%%/html/class_RankSupportBitString.html
804
%%PORTDOCS%%%%DOCSDIR%%/html/class_RankSupportBitString.html
806
%%PORTDOCS%%%%DOCSDIR%%/html/class_ReadStoreElement.html
805
%%PORTDOCS%%%%DOCSDIR%%/html/class_ReadStoreElement.html
807
%%PORTDOCS%%%%DOCSDIR%%/html/class_Repeat.html
806
%%PORTDOCS%%%%DOCSDIR%%/html/class_Repeat.html
807
%%PORTDOCS%%%%DOCSDIR%%/html/class_RevTextFibre.html
808
%%PORTDOCS%%%%DOCSDIR%%/html/class_RightArrayBinaryTree.html
808
%%PORTDOCS%%%%DOCSDIR%%/html/class_RightArrayBinaryTree.html
809
%%PORTDOCS%%%%DOCSDIR%%/html/class_RuntimeError.html
809
%%PORTDOCS%%%%DOCSDIR%%/html/class_RuntimeError.html
810
%%PORTDOCS%%%%DOCSDIR%%/html/class_Score.html
810
%%PORTDOCS%%%%DOCSDIR%%/html/class_Score.html
Lines 1042-1047 Link Here
1042
%%PORTDOCS%%%%DOCSDIR%%/html/demos/dox/stream/lexical_cast.cpp.stdout
1042
%%PORTDOCS%%%%DOCSDIR%%/html/demos/dox/stream/lexical_cast.cpp.stdout
1043
%%PORTDOCS%%%%DOCSDIR%%/html/demos/tutorial/sam_and_bam_io/example.sam
1043
%%PORTDOCS%%%%DOCSDIR%%/html/demos/tutorial/sam_and_bam_io/example.sam
1044
%%PORTDOCS%%%%DOCSDIR%%/html/demos/tutorial/sam_and_bam_io/solution1.cpp
1044
%%PORTDOCS%%%%DOCSDIR%%/html/demos/tutorial/sam_and_bam_io/solution1.cpp
1045
%%PORTDOCS%%%%DOCSDIR%%/html/enum_AminoAcidScoreMatrixID.html
1045
%%PORTDOCS%%%%DOCSDIR%%/html/enum_ArgParseArgument_58_58ArgumentType.html
1046
%%PORTDOCS%%%%DOCSDIR%%/html/enum_ArgParseArgument_58_58ArgumentType.html
1046
%%PORTDOCS%%%%DOCSDIR%%/html/enum_ArgumentParser_58_58ParseResult.html
1047
%%PORTDOCS%%%%DOCSDIR%%/html/enum_ArgumentParser_58_58ParseResult.html
1047
%%PORTDOCS%%%%DOCSDIR%%/html/enum_BamFlags.html
1048
%%PORTDOCS%%%%DOCSDIR%%/html/enum_BamFlags.html
Lines 1291-1296 Link Here
1291
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringComplement.html
1292
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringComplement.html
1292
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringReverse.html
1293
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringReverse.html
1293
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringReverseComplement.html
1294
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_RnaStringReverseComplement.html
1295
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_SelectableAminoAcidMatrix.html
1294
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_SimpleScoreTypedef.html
1296
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_SimpleScoreTypedef.html
1295
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_TraceBack.html
1297
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_TraceBack.html
1296
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_UnicodeString.html
1298
%%PORTDOCS%%%%DOCSDIR%%/html/global_typedef_UnicodeString.html
Lines 1390-1397 Link Here
1390
%%PORTDOCS%%%%DOCSDIR%%/html/js/lang_entities.js
1392
%%PORTDOCS%%%%DOCSDIR%%/html/js/lang_entities.js
1391
%%PORTDOCS%%%%DOCSDIR%%/html/js/less.min.js
1393
%%PORTDOCS%%%%DOCSDIR%%/html/js/less.min.js
1392
%%PORTDOCS%%%%DOCSDIR%%/html/js/link.data.js
1394
%%PORTDOCS%%%%DOCSDIR%%/html/js/link.data.js
1395
%%PORTDOCS%%%%DOCSDIR%%/html/js/module_tree.js
1393
%%PORTDOCS%%%%DOCSDIR%%/html/js/rubydoc_custom.js
1396
%%PORTDOCS%%%%DOCSDIR%%/html/js/rubydoc_custom.js
1394
%%PORTDOCS%%%%DOCSDIR%%/html/js/search.data.js
1397
%%PORTDOCS%%%%DOCSDIR%%/html/js/search.data.js
1398
%%PORTDOCS%%%%DOCSDIR%%/html/js/search.data.module.js
1395
%%PORTDOCS%%%%DOCSDIR%%/html/js/search.engine.js
1399
%%PORTDOCS%%%%DOCSDIR%%/html/js/search.engine.js
1396
%%PORTDOCS%%%%DOCSDIR%%/html/js/version.js
1400
%%PORTDOCS%%%%DOCSDIR%%/html/js/version.js
1397
%%PORTDOCS%%%%DOCSDIR%%/html/lib/3L/3L.less
1401
%%PORTDOCS%%%%DOCSDIR%%/html/lib/3L/3L.less
Lines 1424-1429 Link Here
1424
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/knockout-examples.html
1428
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/knockout-examples.html
1425
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/less/bootstrap-multiselect.less
1429
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/less/bootstrap-multiselect.less
1426
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/tests.html
1430
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-multiselect/tests.html
1431
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-treeview/css/bootstrap-treeview.css
1432
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap-treeview/js/bootstrap-treeview.js
1427
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/css/bootstrap.css
1433
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/css/bootstrap.css
1428
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/css/bootstrap.min.css
1434
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/css/bootstrap.min.css
1429
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/fonts/glyphicons-halflings-regular.eot
1435
%%PORTDOCS%%%%DOCSDIR%%/html/lib/bootstrap/fonts/glyphicons-halflings-regular.eot
Lines 1652-1671 Link Here
1652
%%PORTDOCS%%%%DOCSDIR%%/html/lib/jquery-bbq/unit/unit.js
1658
%%PORTDOCS%%%%DOCSDIR%%/html/lib/jquery-bbq/unit/unit.js
1653
%%PORTDOCS%%%%DOCSDIR%%/html/lib/styles.less
1659
%%PORTDOCS%%%%DOCSDIR%%/html/lib/styles.less
1654
%%PORTDOCS%%%%DOCSDIR%%/html/list.html
1660
%%PORTDOCS%%%%DOCSDIR%%/html/list.html
1655
%%PORTDOCS%%%%DOCSDIR%%/html/macro_PLATFORM_95CUDA.html
1661
%%PORTDOCS%%%%DOCSDIR%%/html/macro_COMPILER_95CLANG.html
1662
%%PORTDOCS%%%%DOCSDIR%%/html/macro_COMPILER_95GCC.html
1663
%%PORTDOCS%%%%DOCSDIR%%/html/macro_COMPILER_95LINTEL.html
1664
%%PORTDOCS%%%%DOCSDIR%%/html/macro_COMPILER_95MSVC.html
1665
%%PORTDOCS%%%%DOCSDIR%%/html/macro_COMPILER_95WINTEL.html
1656
%%PORTDOCS%%%%DOCSDIR%%/html/macro_PLATFORM_95GCC.html
1666
%%PORTDOCS%%%%DOCSDIR%%/html/macro_PLATFORM_95GCC.html
1657
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95DEVICE.html
1658
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95ENABLE_95PARALLELISM.html
1667
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95ENABLE_95PARALLELISM.html
1659
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95GLOBAL.html
1660
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HAS_95BZIP2.html
1668
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HAS_95BZIP2.html
1661
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HAS_95ZLIB.html
1669
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HAS_95ZLIB.html
1662
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HOST.html
1663
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95HOST_95DEVICE.html
1664
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95IS_9532_95BIT.html
1670
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95IS_9532_95BIT.html
1665
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95IS_9564_95BIT.html
1671
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95IS_9564_95BIT.html
1666
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95OMP_95PRAGMA.html
1672
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95OMP_95PRAGMA.html
1667
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95PATH_95TO_95ROOT.html
1673
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95PATH_95TO_95ROOT.html
1668
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95TEMP_95FILENAME.html
1674
%%PORTDOCS%%%%DOCSDIR%%/html/macro_SEQAN_95TEMP_95FILENAME.html
1675
%%PORTDOCS%%%%DOCSDIR%%/html/macro_STDLIB_95GNU.html
1676
%%PORTDOCS%%%%DOCSDIR%%/html/macro_STDLIB_95LLVM.html
1677
%%PORTDOCS%%%%DOCSDIR%%/html/macro_STDLIB_95VS.html
1669
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoConstraintIterator.html
1678
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoConstraintIterator.html
1670
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoIndexCountChildren.html
1679
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoIndexCountChildren.html
1671
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoMaximalRepeats.html
1680
%%PORTDOCS%%%%DOCSDIR%%/html/page_DemoMaximalRepeats.html
Lines 1784-1789 Link Here
1784
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_MaxRepeatsIterator.html
1793
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_MaxRepeatsIterator.html
1785
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModCyclicShapeModifiedIterator.html
1794
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModCyclicShapeModifiedIterator.html
1786
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModCyclicShapeModifiedString.html
1795
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModCyclicShapeModifiedString.html
1796
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModPaddingIterator.html
1797
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModPaddingString.html
1787
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModReverseIterator.html
1798
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModReverseIterator.html
1788
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModReverseString.html
1799
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModReverseString.html
1789
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModViewModifiedIterator.html
1800
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ModViewModifiedIterator.html
Lines 1829-1834 Link Here
1829
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_RoiFileIn.html
1840
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_RoiFileIn.html
1830
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_RoiFileOut.html
1841
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_RoiFileOut.html
1831
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_Sampler.html
1842
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_Sampler.html
1843
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_ScoreSimdWrapper.html
1832
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SeqFileIn.html
1844
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SeqFileIn.html
1833
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SeqFileOut.html
1845
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SeqFileOut.html
1834
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SetHorspoolPattern.html
1846
%%PORTDOCS%%%%DOCSDIR%%/html/specialization_SetHorspoolPattern.html
Lines 1899-1903 Link Here
1899
%%PORTDOCS%%%%DOCSDIR%%/html/tag_Nothing.html
1911
%%PORTDOCS%%%%DOCSDIR%%/html/tag_Nothing.html
1900
%%PORTDOCS%%%%DOCSDIR%%/html/variable_BAM_95FLAG_95SUPPLEMENTARY_32_61_320x0800.html
1912
%%PORTDOCS%%%%DOCSDIR%%/html/variable_BAM_95FLAG_95SUPPLEMENTARY_32_61_320x0800.html
1901
%%PORTDOCS%%%%DOCSDIR%%/html/variable_LibraryStoreElementstd.html
1913
%%PORTDOCS%%%%DOCSDIR%%/html/variable_LibraryStoreElementstd.html
1902
%%PORTDOCS%%@dir %%DOCSDIR%%/html/docs/seqan
1903
%%PORTDOCS%%@dir %%DOCSDIR%%/html/lists

Return to bug 212682