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# $FreeBSD: head/biology/seqan-apps/Makefile 459315 2018-01-18 04:11:02Z jbeich $ |
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# $FreeBSD: head/biology/seqan-apps/Makefile 459315 2018-01-18 04:11:02Z jbeich $ |
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PORTNAME= seqan-apps |
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PORTNAME= seqan-apps |
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PORTVERSION= 2.2.0 |
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DISTVERSIONPREFIX= seqan-v |
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DISTVERSIONPREFIX= seqan-v |
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PORTREVISION= 9 |
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DISTVERSION= 2.4.0 |
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CATEGORIES= biology |
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CATEGORIES= biology |
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MAINTAINER= h2+fbsdports@fsfe.org |
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MAINTAINER= h2+fbsdports@fsfe.org |
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COMMENT= Official Bioinformatic applications based on the SeqAn library |
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COMMENT= Official bioinformatic applications based on the SeqAn library |
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LICENSE= BSD3CLAUSE LGPL3 GPLv3 |
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LICENSE= BSD3CLAUSE LGPL3 GPLv3 |
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LICENSE_COMB= multi |
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LICENSE_COMB= multi |
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BUILD_DEPENDS= boost-libs>0:devel/boost-libs |
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BUILD_DEPENDS= boost-libs>0:devel/boost-libs |
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BROKEN_aarch64= fails to compile: Error: unknown mnemonic rep -- rep |
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# once #199603 is resolved, add c++14-lang: |
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BROKEN_armv6= fails to compile: Error: bad instruction rep |
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# USES= cmake:outsource compiler:openmp,c++14-lang |
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BROKEN_armv7= fails to compile: Error: bad instruction rep |
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USES= cmake:outsource compiler:openmp |
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BROKEN_powerpc64= fails to compile: Error: unrecognized opcode: rep |
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USE_GITHUB= yes |
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USE_GITHUB= yes |
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GH_ACCOUNT= seqan |
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GH_ACCOUNT= seqan |
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GH_PROJECT= seqan |
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GH_PROJECT= seqan |
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# once #199603 is resolved, do the following instead of USE_GCC |
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# USES= cmake:outsource compiler:openmp,c++14-lang |
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USES= cmake:outsource |
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CMAKE_ARGS= -DSEQAN_BUILD_SYSTEM="SEQAN_RELEASE_APPS" |
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CMAKE_ARGS= -DSEQAN_BUILD_SYSTEM="SEQAN_RELEASE_APPS" |
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USE_GCC= yes |
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OPTIONS_RADIO= ARCH |
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OPTIONS_RADIO_ARCH= SSE4 AVX2 NATIVE |
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SSE4_DESC= Use SSE4 and POPCNT instructions |
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SSE4_CMAKE_ON= -DSEQAN_ARCH_SSE4:BOOL=TRUE |
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AVX2_DESC= Use SSE4, AVX2 and POPCNT instructions |
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AVX2_CMAKE_ON= -DSEQAN_ARCH_AVX2:BOOL=TRUE |
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NATIVE_DESC= Use all available instruction sets (-march=native) |
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NATIVE_CMAKE_ON= -DSEQAN_ARCH_NATIVE:BOOL=TRUE |
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.include <bsd.port.pre.mk> |
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.include <bsd.port.pre.mk> |
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