Attachment 194427 Details for Bug 229180 – svn diff

[patch] svn diff

exonerate.diff (text/plain), 3.50 KB, created by Motomichi Matsuzaki on 2018-06-20 13:38:45 UTC

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Creator: Motomichi Matsuzaki

Created: 2018-06-20 13:38:45 UTC

Size: 3.50 KB

patch

obsolete

>Index: Makefile
>===================================================================
>--- Makefile	(nonexistent)
>+++ Makefile	(working copy)
>@@ -0,0 +1,26 @@
>+# Created by: Motomichi Matsuzaki <mzaki@niid.go.jp>
>+# $FreeBSD$
>+
>+PORTNAME=	exonerate
>+PORTVERSION=	2.4.0
>+CATEGORIES=	biology
>+MASTER_SITES=	http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/
>+
>+MAINTAINER=	mzaki@niid.go.jp
>+COMMENT=	Generic tool for sequence alignment
>+
>+LICENSE=	GPLv3
>+
>+GNU_CONFIGURE=	yes
>+
>+USES=		gnome pkgconfig
>+USE_GNOME=	glib20
>+
>+MAKE_JOBS_UNSAFE=	yes
>+TEST_TARGET=	check
>+
>+OPTIONS_DEFINE=	TEST
>+
>+post-build-TEST-on:	do-test
>+
>+.include <bsd.port.mk>
>
>Property changes on: Makefile
>___________________________________________________________________
>Added: svn:eol-style
>## -0,0 +1 ##
>+native
>\ No newline at end of property
>Added: svn:keywords
>## -0,0 +1 ##
>+FreeBSD=%H
>\ No newline at end of property
>Added: svn:mime-type
>## -0,0 +1 ##
>+text/plain
>\ No newline at end of property
>Index: distinfo
>===================================================================
>--- distinfo	(nonexistent)
>+++ distinfo	(working copy)
>@@ -0,0 +1,3 @@
>+TIMESTAMP = 1529394154
>+SHA256 (exonerate-2.4.0.tar.gz) = f849261dc7c97ef1f15f222e955b0d3daf994ec13c9db7766f1ac7e77baa4042
>+SIZE (exonerate-2.4.0.tar.gz) = 520899
>
>Property changes on: distinfo
>___________________________________________________________________
>Added: fbsd:nokeywords
>## -0,0 +1 ##
>+yes
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>Added: svn:eol-style
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>Index: pkg-descr
>===================================================================
>--- pkg-descr	(nonexistent)
>+++ pkg-descr	(working copy)
>@@ -0,0 +1,10 @@
>+Exonerate is a tool for various types of pairwise sequence comparison.
>+It allows us to align sequences using many alignment models including
>+est2genome, protein2genome, and so on.
>+
>+Citation:
>+
>+Slater, G. S. C. and Birney, E. (2005) Automated generation of heuristics
>+for biological sequence comparison. BMC Bioinformatics 6:31.
>+
>+WWW: https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate
>
>Property changes on: pkg-descr
>___________________________________________________________________
>Added: fbsd:nokeywords
>## -0,0 +1 ##
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>Added: svn:eol-style
>## -0,0 +1 ##
>+native
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>Added: svn:mime-type
>## -0,0 +1 ##
>+text/plain
>\ No newline at end of property
>Index: pkg-plist
>===================================================================
>--- pkg-plist	(nonexistent)
>+++ pkg-plist	(working copy)
>@@ -0,0 +1,31 @@
>+bin/exonerate
>+bin/ipcress
>+bin/exonerate-server
>+bin/fastaclean
>+bin/fastaclip
>+bin/fastachecksum
>+bin/fastacomposition
>+bin/fastadiff
>+bin/fastaexplode
>+bin/fastafetch
>+bin/fastahardmask
>+bin/fastaindex
>+bin/fastalength
>+bin/fastanrdb
>+bin/fastaoverlap
>+bin/fastareformat
>+bin/fastaremove
>+bin/fastarevcomp
>+bin/fastasoftmask
>+bin/fastasort
>+bin/fastasplit
>+bin/fastasubseq
>+bin/fastatranslate
>+bin/fastavalidcds
>+bin/fasta2esd
>+bin/fastaannotatecdna
>+bin/esd2esi
>+man/man1/exonerate-server.1.gz
>+man/man1/fastautils.1.gz
>+man/man1/exonerate.1.gz
>+man/man1/ipcress.1.gz
>
>Property changes on: pkg-plist
>___________________________________________________________________
>Added: fbsd:nokeywords
>## -0,0 +1 ##
>+yes
>\ No newline at end of property
>Added: svn:eol-style
>## -0,0 +1 ##
>+native
>\ No newline at end of property
>Added: svn:mime-type
>## -0,0 +1 ##
>+text/plain
>\ No newline at end of property

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Attachments on bug 229180: 194427