Index: Makefile
===================================================================
--- Makefile	(revision 501154)
+++ Makefile	(working copy)
@@ -34,4 +34,8 @@
 CONFIGURE_ARGS+=--without-sse
 .endif
 
+.if ${CHOSEN_COMPILER_TYPE} == gcc
+CXXFLAGS+=	-faligned-new
+.endif
+
 .include <bsd.port.post.mk>
Index: files/patch-include_jellyfish_hash__counter.hpp
===================================================================
--- files/patch-include_jellyfish_hash__counter.hpp	(nonexistent)
+++ files/patch-include_jellyfish_hash__counter.hpp	(working copy)
@@ -0,0 +1,11 @@
+--- include/jellyfish/hash_counter.hpp.orig	2019-05-13 07:43:45 UTC
++++ include/jellyfish/hash_counter.hpp
+@@ -206,7 +206,7 @@ class hash_counter { (protected)
+       try {
+         new_ary_   = new array(ary_->size() * 2, ary_->key_len(), ary_->val_len(),
+                                ary_->max_reprobe(), ary_->reprobes());
+-       } catch(typename array::ErrorAllocation e) {
++       } catch(typename array::ErrorAllocation &e) {
+         new_ary_ = 0;
+       }
+     }

Property changes on: files/patch-include_jellyfish_hash__counter.hpp
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property
Index: files/patch-sub__commands_count__main.cc
===================================================================
--- files/patch-sub__commands_count__main.cc	(nonexistent)
+++ files/patch-sub__commands_count__main.cc	(working copy)
@@ -0,0 +1,11 @@
+--- sub_commands/count_main.cc.orig	2019-05-13 07:42:50 UTC
++++ sub_commands/count_main.cc
+@@ -330,7 +330,7 @@ int count_main(int argc, char *argv[])
+         uint64_t max = args.upper_count_given ? args.upper_count_arg : std::numeric_limits<uint64_t>::max();
+         try {
+           merge_files(files, args.output_arg, header, min, max);
+-        } catch(MergeError e) {
++        } catch(MergeError &e) {
+           err::die(err::msg() << e.what());
+         }
+         if(!args.no_unlink_flag) {

Property changes on: files/patch-sub__commands_count__main.cc
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property
Index: files/patch-sub__commands_merge__main.cc
===================================================================
--- files/patch-sub__commands_merge__main.cc	(nonexistent)
+++ files/patch-sub__commands_merge__main.cc	(working copy)
@@ -0,0 +1,11 @@
+--- sub_commands/merge_main.cc.orig	2019-05-13 07:46:43 UTC
++++ sub_commands/merge_main.cc
+@@ -33,7 +33,7 @@ int merge_main(int argc, char *argv[])
+ 
+   try {
+     merge_files(args.input_arg, args.output_arg, out_header, min, max);
+-  } catch(MergeError e) {
++  } catch(MergeError &e) {
+     err::die(err::msg() << e.what());
+   }
+ 

Property changes on: files/patch-sub__commands_merge__main.cc
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property
Index: files/patch-sub__commands_query__main.cc
===================================================================
--- files/patch-sub__commands_query__main.cc	(nonexistent)
+++ files/patch-sub__commands_query__main.cc	(working copy)
@@ -0,0 +1,20 @@
+--- sub_commands/query_main.cc.orig	2019-05-13 07:47:53 UTC
++++ sub_commands/query_main.cc
+@@ -60,7 +60,7 @@ void query_from_cmdline(std::vector<const char*> mers,
+       if(canonical)
+         m.canonicalize();
+       out << m << " " << db.check(m) << "\n";
+-    } catch(std::length_error e) {
++    } catch(std::length_error &e) {
+       std::cerr << "Invalid mer '" << *it << "'\n";
+     }
+   }
+@@ -77,7 +77,7 @@ void query_from_stdin(const Database& db, std::ostream
+       if(canonical)
+         m.canonicalize();
+       out << db.check(m) << std::endl;  // a flush is need for interactive use
+-    } catch(std::length_error e) {
++    } catch(std::length_error &e) {
+       std::cerr << "Invalid mer '" << buffer << "'" << std::endl;
+     }
+   }

Property changes on: files/patch-sub__commands_query__main.cc
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property