Attachment 205252 Details for Bug 238737 – patch

[patch] patch

abyss.patch (text/plain), 2.23 KB, created by Piotr Kubaj on 2019-06-21 08:39:19 UTC

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Creator: Piotr Kubaj

Created: 2019-06-21 08:39:19 UTC

Size: 2.23 KB

patch

obsolete

>Index: Makefile
>===================================================================
>--- Makefile	(revision 504762)
>+++ Makefile	(working copy)
>@@ -6,6 +6,9 @@
> CATEGORIES=	biology
> MASTER_SITES=	http://www.bcgsc.ca/platform/bioinfo/software/${PORTNAME}/releases/${DISTVERSION}/
> 
>+PATCH_SITES=	https://github.com/bcgsc/${PORTNAME}/commit/
>+PATCHFILES=	25eb9d2a914fb211fdfe04fcda5593f29fd23ff5.patch:-p1 \
>+
> MAINTAINER=	yuri@FreeBSD.org
> COMMENT=	Assembly By Short Sequences: parallel, paired-end sequence assembler
> 
>@@ -21,7 +24,7 @@
> RUN_DEPENDS=	bash:shells/bash \
> 		gmake:devel/gmake
> 
>-USES=		gmake iconv:wchar_t localbase:ldflags shebangfix sqlite
>+USES=		compiler:c++11-lang gmake iconv:wchar_t localbase:ldflags shebangfix sqlite
> SHEBANG_FILES=	bin/${PORTNAME}-*
> SHEBANG_LANG=	make
> make_OLD_CMD=	/usr/bin/make
>Index: distinfo
>===================================================================
>--- distinfo	(revision 504762)
>+++ distinfo	(working copy)
>@@ -1,3 +1,5 @@
>-TIMESTAMP = 1551061546
>+TIMESTAMP = 1561103807
> SHA256 (abyss-2.1.5.tar.gz) = 65bfc8241e6ff5adf7601ae4ae93a75e3db86d6bff5d593c75aaff7f0ef41757
> SIZE (abyss-2.1.5.tar.gz) = 1201318
>+SHA256 (25eb9d2a914fb211fdfe04fcda5593f29fd23ff5.patch) = 93ad66c42610c4fba8cfbe256a2ab689bf4a76974c3b97a9e1094863614ad934
>+SIZE (25eb9d2a914fb211fdfe04fcda5593f29fd23ff5.patch) = 1701
>Index: files/patch-Common_city.cc
>===================================================================
>--- files/patch-Common_city.cc	(nonexistent)
>+++ files/patch-Common_city.cc	(working copy)
>@@ -0,0 +1,13 @@
>+--- Common/city.cc.orig	2018-09-21 23:44:14 UTC
>++++ Common/city.cc
>+@@ -65,6 +65,10 @@ static uint32 UNALIGNED_LOAD32(const char *p) {
>+ #define bswap_32(x) OSSwapInt32(x)
>+ #define bswap_64(x) OSSwapInt64(x)
>+ 
>++#elif defined(__FreeBSD__)
>++#include <sys/endian.h>
>++#define bswap_32(x) bswap32(x)
>++#define bswap_64(x) bswap64(x)
>+ #else
>+ #include <byteswap.h>
>+ #endif
>
>Property changes on: files/patch-Common_city.cc
>___________________________________________________________________
>Added: fbsd:nokeywords
>## -0,0 +1 ##
>+yes
>\ No newline at end of property
>Added: svn:eol-style
>## -0,0 +1 ##
>+native
>\ No newline at end of property
>Added: svn:mime-type
>## -0,0 +1 ##
>+text/plain
>\ No newline at end of property

Flags:

yuri: maintainer-approval+

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Attachments on bug 238737: 205252