=>> Building science/netcdf build started at Thu Jul 18 21:25:42 CEST 2019 port directory: /usr/ports/science/netcdf package name: netcdf-4.7.0 building for: FreeBSD buildbot.technikradio.org 12.0-RELEASE-p7 FreeBSD 12.0-RELEASE-p7 amd64 maintained by: sunpoet@FreeBSD.org Makefile ident: $FreeBSD: head/science/netcdf/Makefile 500528 2019-04-30 19:07:06Z sunpoet $ Poudriere version: 3.3.2_1 Host OSVERSION: 1200086 Jail OSVERSION: 1200086 Job Id: 04 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1200086 UNAME_v=FreeBSD 12.0-RELEASE-p7 UNAME_r=12.0-RELEASE-p7 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.3.2_1 MASTERMNT=/usr/local/poudriere/data/.m/x230-11_0-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen GID=0 UID=0 PWD=/usr/local/poudriere/data/.m/x230-11_0-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=x230-11_0-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/x230-11_0-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for netcdf-4.7.0: DAP=off: Build DAP client and remote testing DOCS=on: Build and/or install documentation DOXYGEN=off: Build documentation with Doxygen SZIP=on: SZIP support (required if HDF5 was built with SZIP) ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --disable-filter-testing --enable-netcdf-4 --disable-dap --disable-doxygen --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/netcdf/work HOME=/wrkdirs/usr/ports/science/netcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/netcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/netcdf/work HOME=/wrkdirs/usr/ports/science/netcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/netcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-fPIC -DPIC -isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-lsz -L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/netcdf" EXAMPLESDIR="share/examples/netcdf" DATADIR="share/netcdf" WWWDIR="www/netcdf" ETCDIR="etc/netcdf" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/netcdf DOCSDIR=/usr/local/share/doc/netcdf EXAMPLESDIR=/usr/local/share/examples/netcdf WWWDIR=/usr/local/www/netcdf ETCDIR=/usr/local/etc/netcdf --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/x230-11_0-make.conf #### DISABLE_LICENSES=yes #DEFAULT_VERSIONS+=python=3.6 WAYLAND=no MAKE_JOBS_UNSAFE=yes .if ${.CURDIR:M*graphics/ImageMagick6-nox11*} CC=gcc8 CXX=g++8 CPP=cpp8 CFLAGS= -O2 -pipe -march=barcelona -mtune=barcelona COPTFLAGS= -O2 -pipe -march=barcelona -mtune=barcelona .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=12.0-RELEASE-p7 OSREL=12.0 OSVERSION=1200086 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== =========================================================================== =================================================== ===> netcdf-4.7.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [buildbot.technikradio.org] Installing pkg-1.11.1... [buildbot.technikradio.org] Extracting pkg-1.11.1: .......... done ===> netcdf-4.7.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of netcdf-4.7.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-4.7.0 for building =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-4.7.0 for building => SHA256 Checksum OK for netcdf-c-4.7.0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by netcdf-4.7.0 for building ===> Extracting for netcdf-4.7.0 => SHA256 Checksum OK for netcdf-c-4.7.0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for netcdf-4.7.0 =========================================================================== =================================================== ===> netcdf-4.7.0 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.2.1_3.txz [buildbot.technikradio.org] Installing gmake-4.2.1_3... [buildbot.technikradio.org] `-- Installing gettext-runtime-0.20.1... [buildbot.technikradio.org] | `-- Installing indexinfo-0.3.1... [buildbot.technikradio.org] | `-- Extracting indexinfo-0.3.1: . done [buildbot.technikradio.org] `-- Extracting gettext-runtime-0.20.1: .......... done [buildbot.technikradio.org] Extracting gmake-4.2.1_3: .......... done ===> netcdf-4.7.0 depends on executable: gmake - found ===> Returning to build of netcdf-4.7.0 =========================================================================== =================================================== ===> netcdf-4.7.0 depends on shared library: libhdf5.so - not found ===> Installing existing package /packages/All/hdf5-1.10.5_1.txz [buildbot.technikradio.org] Installing hdf5-1.10.5_1... [buildbot.technikradio.org] `-- Installing hdf-szip-2.1.1... [buildbot.technikradio.org] `-- Extracting hdf-szip-2.1.1: ....... done [buildbot.technikradio.org] Extracting hdf5-1.10.5_1: .......... done ===> netcdf-4.7.0 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> Returning to build of netcdf-4.7.0 ===> netcdf-4.7.0 depends on shared library: libsz.so - found (/usr/local/lib/libsz.so) =========================================================================== =================================================== ===> Configuring for netcdf-4.7.0 configure: loading site script /usr/ports/Templates/config.site configure: netCDF 4.7.0 checking build system type... amd64-portbld-freebsd12.0 checking host system type... amd64-portbld-freebsd12.0 checking target system type... amd64-portbld-freebsd12.0 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p checking for gawk... (cached) /usr/bin/awk checking whether gmake sets $(MAKE)... yes checking whether gmake supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether a NCIO_MINBLOCKSIZE was specified... 256 checking for valgrind... no checking if fsync support is enabled... no checking if jna bug workaround is enabled... no checking whether we should build netCDF-4... yes checking whether we should build with HDF5... yes checking do we require hdf5 dynamic-loading support... yes checking whether reading of HDF4 SD files is to be enabled... no checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget)... no checking whether we should attempt to install netcdf-fortran (EXPERIMENTAL)... no checking whether parallel IO tests should be run... no checking whether a user specified program to run mpi programs... mpiexec checking whether a default chunk size in bytes was specified... 4194304 checking whether a maximum per-variable cache size for HDF5 was specified... 67108864 checking whether a number of chunks for the default per-variable cache was specified... 10 checking whether a default file cache size for HDF5 was specified... 4194304 checking whether a default file cache maximum number of elements for HDF5 was specified... 1009 checking whether a default cache preemption for HDF5 was specified... 0.75 checking whether netCDF-4 logging is enabled... no checking whether nc_set_log_level() function is included (will do nothing unless enable-logging is also used)... yes checking whether DAP client(s) are to be built... no checking whether gmake supports the include directive... yes (GNU style) checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking dependency style of cc... gcc3 checking for curl_easy_setopt in -lcurl... no checking whether dap remote testing should be enabled (default on)... no checking whether dap remote authorization testing should be enabled (default off)... no checking which remote test server(s) to use... 149.165.169.123:8080,remotetest.unidata.ucar.edu checking whether the time-consuming dap tests should be enabled (default off)... no checking whether to enable strict null-byte header padding when reading (default off)... no checking whether FFIO will be used... no checking whether STDIO will be used... no checking whether examples should be built... yes checking whether v2 netCDF API should be built... yes checking whether the ncgen/ncdump/nccopy should be built... yes checking whether test should be built and run... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmarks should be run... no checking whether extreme numbers should be used in tests... yes checking where to put large temp files if large file tests are run... . checking Extra values for _NCProperties... checking whether user-defined format 0 was specified... checking whether a magic number for user-defined format 0 was specified... checking whether user-defined format 1 was specified... checking whether a magic number for user-defined format 1 was specified... configure: finding C compiler checking for gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking whether cc understands -c and -o together... (cached) yes checking dependency style of cc... (cached) gcc3 checking for an ANSI C-conforming const... yes checking whether CURLOPT_USERNAME is defined... no checking whether CURLOPT_PASSWORD is defined... no checking whether CURLOPT_KEYPASSWD is defined... no checking whether CURLINFO_RESPONSE_CODE is defined... no checking whether CURLOPT_BUFFERSIZE is defined... no checking whether CURLOPT_TCP_KEEPALIVE is defined... no configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 262144 checking how to convert amd64-portbld-freebsd12.0 file names to amd64-portbld-freebsd12.0 format... func_convert_file_noop checking how to convert amd64-portbld-freebsd12.0 file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from cc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cpp checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... yes checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... freebsd12.0 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: finding other utilities checking for m4... m4 checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no configure: displaying some results checking CPPFLAGS... -fPIC -DPIC -isystem /usr/local/include checking CC CFLAGS... cc -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing checking type cc... cc is a tracked alias for /usr/bin/cc checking CXX... c++ checking CXXFLAGS... -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include checking type c++... c++ is /usr/bin/c++ checking FC... unset checking F90... unset checking AR... ar checking AR_FLAGS... cru checking type ar... ar is /usr/bin/ar checking NM... /usr/bin/nm checking NMFLAGS... configure: checking types, headers, and functions checking for sys/param.h... (cached) yes checking for libgen.h... (cached) yes checking for ANSI C header files... (cached) yes checking for locale.h... (cached) yes checking for stdio.h... (cached) yes checking for stdarg.h... (cached) yes checking for fcntl.h... (cached) yes checking for malloc.h... (cached) no checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking for getopt.h... (cached) yes checking for sys/time.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/resource.h... (cached) yes checking ftw.h usability... yes checking ftw.h presence... yes checking for ftw.h... yes checking for strlcat... (cached) yes checking for snprintf... (cached) yes checking for strdup... (cached) yes checking for strtoll... (cached) yes checking for strtoull... (cached) yes checking for mkstemp... (cached) yes checking for mktemp... (cached) yes checking for random... (cached) yes checking for getrlimit... (cached) yes checking for gettimeofday... (cached) yes checking for fsync... (cached) yes checking for MPI_Comm_f2c... no checking for MPI_Info_f2c... no checking for memmove... (cached) yes checking for getpagesize... (cached) yes checking for sysconf... (cached) yes checking whether mmap is enabled for in-memory files... no checking for mmap... (cached) yes checking for mremap... no checking whether MAP_ANONYMOUS is defined... yes mmap functionality is not available: disabling mmap checking whether byte range support is enabled... no configure: error: curl required for byte range support. Install curl or build without --enable-byterange. ===> Script "configure" failed unexpectedly. Please report the problem to sunpoet@FreeBSD.org [maintainer] and attach the "/wrkdirs/usr/ports/science/netcdf/work/netcdf-c-4.7.0/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** Error code 1 Stop. make: stopped in /usr/ports/science/netcdf =>> Cleaning up wrkdir ===> Cleaning for netcdf-4.7.0 build of science/netcdf | netcdf-4.7.0 ended at Thu Jul 18 21:25:48 CEST 2019 build time: 00:00:06 !!! build failure encountered !!!