Attachment 208452 Details for Bug 241363 – v1

[patch] v1

gsl-2.6.v1.diff (text/plain), 2.94 KB, created by Tobias C. Berner on 2019-10-20 11:51:40 UTC

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Creator: Tobias C. Berner

Created: 2019-10-20 11:51:40 UTC

Size: 2.94 KB

patch

obsolete

>diff --git a/biology/gemma/Makefile b/biology/gemma/Makefile
>index 72634c0e3506..062a368a2c2f 100644
>--- a/biology/gemma/Makefile
>+++ b/biology/gemma/Makefile
>@@ -26,6 +26,8 @@ LDFLAGS+=	-lopenblas
> 
> OPTIONS_DEFINE=	EXAMPLES
> 
>+BROKEN=		Conflict between math/gsl and math/cblas constant redeclarations
>+
> pre-configure:
> 	@${REINPLACE_CMD} -e 's|../bin/gemma|../gemma|' ${WRKSRC}/test/*.sh
> 
>diff --git a/math/gsl/Makefile b/math/gsl/Makefile
>index 7cc00fab520b..558da29aee96 100644
>--- a/math/gsl/Makefile
>+++ b/math/gsl/Makefile
>@@ -2,8 +2,7 @@
> # $FreeBSD$
> 
> PORTNAME=	gsl
>-PORTVERSION=	2.5
>-PORTREVISION=	1
>+PORTVERSION=	2.6
> CATEGORIES=	math
> MASTER_SITES=	GNU
> 
>diff --git a/math/gsl/distinfo b/math/gsl/distinfo
>index 51580cef2e74..bbf53b1b2661 100644
>--- a/math/gsl/distinfo
>+++ b/math/gsl/distinfo
>@@ -1,3 +1,3 @@
>-TIMESTAMP = 1529158403
>-SHA256 (gsl-2.5.tar.gz) = 0460ad7c2542caaddc6729762952d345374784100223995eb14d614861f2258d
>-SIZE (gsl-2.5.tar.gz) = 7303881
>+TIMESTAMP = 1566551853
>+SHA256 (gsl-2.6.tar.gz) = b782339fc7a38fe17689cb39966c4d821236c28018b6593ddb6fd59ee40786a8
>+SIZE (gsl-2.6.tar.gz) = 7398548
>diff --git a/math/gsl/pkg-plist b/math/gsl/pkg-plist
>index de5c97ccdbce..507c6fd2ee47 100644
>--- a/math/gsl/pkg-plist
>+++ b/math/gsl/pkg-plist
>@@ -19,6 +19,10 @@ include/gsl/gsl_block_uint.h
> include/gsl/gsl_block_ulong.h
> include/gsl/gsl_block_ushort.h
> include/gsl/gsl_bspline.h
>+include/gsl/gsl_bst.h
>+include/gsl/gsl_bst_avl.h
>+include/gsl/gsl_bst_rb.h
>+include/gsl/gsl_bst_types.h
> include/gsl/gsl_cblas.h
> include/gsl/gsl_cdf.h
> include/gsl/gsl_chebyshev.h
>@@ -213,6 +217,20 @@ include/gsl/gsl_splinalg.h
> include/gsl/gsl_spline.h
> include/gsl/gsl_spline2d.h
> include/gsl/gsl_spmatrix.h
>+include/gsl/gsl_spmatrix_char.h
>+include/gsl/gsl_spmatrix_complex_double.h
>+include/gsl/gsl_spmatrix_complex_float.h
>+include/gsl/gsl_spmatrix_complex_long_double.h
>+include/gsl/gsl_spmatrix_double.h
>+include/gsl/gsl_spmatrix_float.h
>+include/gsl/gsl_spmatrix_int.h
>+include/gsl/gsl_spmatrix_long.h
>+include/gsl/gsl_spmatrix_long_double.h
>+include/gsl/gsl_spmatrix_short.h
>+include/gsl/gsl_spmatrix_uchar.h
>+include/gsl/gsl_spmatrix_uint.h
>+include/gsl/gsl_spmatrix_ulong.h
>+include/gsl/gsl_spmatrix_ushort.h
> include/gsl/gsl_statistics.h
> include/gsl/gsl_statistics_char.h
> include/gsl/gsl_statistics_double.h
>@@ -250,8 +268,8 @@ include/gsl/gsl_wavelet.h
> include/gsl/gsl_wavelet2d.h
> lib/libgsl.a
> lib/libgsl.so
>-lib/libgsl.so.23
>-lib/libgsl.so.23.1.0
>+lib/libgsl.so.25
>+lib/libgsl.so.25.0.0
> lib/libgslcblas.a
> lib/libgslcblas.so
> lib/libgslcblas.so.0
>diff --git a/math/p5-Math-GSL/Makefile b/math/p5-Math-GSL/Makefile
>index 4bfaec297e2e..b27ede1aa8a9 100644
>--- a/math/p5-Math-GSL/Makefile
>+++ b/math/p5-Math-GSL/Makefile
>@@ -23,6 +23,8 @@ TEST_DEPENDS=	p5-Test-Class>=0.12:devel/p5-Test-Class \
> USES=		perl5
> USE_PERL5=	modbuild
> 
>+BROKEN=		Does not work with gsl-2.6
>+
> post-install:
> 	${FIND} ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/GSL/ -name "*.so" -exec ${STRIP_CMD} {} +
>

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