Attachment 71919 Details for Bug 104635 – py24-biopython-1.42.patch

[patch] py24-biopython-1.42.patch

py24-biopython-1.42.patch (text/plain), 12.79 KB, created by Thomas Abthorpe on 2006-10-20 23:30:18 UTC

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Creator: Thomas Abthorpe

Created: 2006-10-20 23:30:18 UTC

Size: 12.79 KB

patch

obsolete

>Index: Makefile
>===================================================================
>RCS file: /home/ncvs/ports/biology/py-biopython/Makefile,v
>retrieving revision 1.21
>diff -u -r1.21 Makefile
>--- Makefile	11 Nov 2005 01:15:34 -0000	1.21
>+++ Makefile	20 Oct 2006 22:21:57 -0000
>@@ -6,9 +6,9 @@
> #
> 
> PORTNAME=	biopython
>-PORTVERSION=	1.41
>+PORTVERSION=	1.42
> CATEGORIES=	biology python
>-MASTER_SITES=	http://www.biopython.org/files/
>+MASTER_SITES=	http://www.biopython.org/DIST/
> PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
> 
> MAINTAINER=	mauricio@arareko.net
>Index: distinfo
>===================================================================
>RCS file: /home/ncvs/ports/biology/py-biopython/distinfo,v
>retrieving revision 1.12
>diff -u -r1.12 distinfo
>--- distinfo	11 Nov 2005 01:15:34 -0000	1.12
>+++ distinfo	20 Oct 2006 22:21:57 -0000
>@@ -1,3 +1,3 @@
>-MD5 (biopython-1.41.tar.gz) = 03f8efc258fb49b07d1a2b642fa8362e
>-SHA256 (biopython-1.41.tar.gz) = 15b708b7635fd993aad3c53fd4cfc28601da6d4332b027d09899f1cb5178cef9
>-SIZE (biopython-1.41.tar.gz) = 3807547
>+MD5 (biopython-1.42.tar.gz) = 6d9bf58d0fcfa5a3b2053ad419069ff3
>+SHA256 (biopython-1.42.tar.gz) = ba4d00fdf7de67196ecba317dee09a14850b40596bd83d73e458c5f19fc9fc58
>+SIZE (biopython-1.42.tar.gz) = 3933507
>Index: pkg-plist
>===================================================================
>RCS file: /home/ncvs/ports/biology/py-biopython/pkg-plist,v
>retrieving revision 1.11
>diff -u -r1.11 pkg-plist
>--- pkg-plist	11 Nov 2005 01:15:34 -0000	1.11
>+++ pkg-plist	20 Oct 2006 22:21:57 -0000
>@@ -7,9 +7,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Ais/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.py
>-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/Ais/example_ais2.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.py
> %%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Align/AlignInfo.pyo
>@@ -98,9 +95,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/Cluster/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Cluster/__init__.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Cluster/cluster.so
>-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.py
>-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/Cluster/data.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Compass/__init__.pyo
>@@ -678,10 +672,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/PDB/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/MMCIFlex.so
>-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.py
>-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF/__init__.pyo
> %%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.py
> %%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.pyc
> %%PYTHON_SITELIBDIR%%/Bio/PDB/parse_pdb_header.pyo
>@@ -727,12 +717,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Rebase/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.py
>-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/RecordFile.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.py
>-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/ReseekFile.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Restriction/DNAUtils.so
> %%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.py
> %%PYTHON_SITELIBDIR%%/Bio/Restriction/PrintFormat.pyc
>@@ -791,9 +775,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/SVM.py
>-%%PYTHON_SITELIBDIR%%/Bio/SVM.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/SVM.pyo
> %%PYTHON_SITELIBDIR%%/Bio/Saf/Record.py
> %%PYTHON_SITELIBDIR%%/Bio/Saf/Record.pyc
> %%PYTHON_SITELIBDIR%%/Bio/Saf/Record.pyo
>@@ -942,9 +923,7 @@
> %%PYTHON_SITELIBDIR%%/Bio/builders/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/builders/__init__.pyo
> %%PYTHON_SITELIBDIR%%/Bio/cMarkovModel.so
>-%%PYTHON_SITELIBDIR%%/Bio/cSVM.so
> %%PYTHON_SITELIBDIR%%/Bio/cdistance.so
>-%%PYTHON_SITELIBDIR%%/Bio/ckMeans.so
> %%PYTHON_SITELIBDIR%%/Bio/clistfns.so
> %%PYTHON_SITELIBDIR%%/Bio/cmathfns.so
> %%PYTHON_SITELIBDIR%%/Bio/config/DBRegistry.py
>@@ -1075,9 +1054,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.py
> %%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.pyc
> %%PYTHON_SITELIBDIR%%/Bio/formatdefs/swissprot.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/kMeans.py
>-%%PYTHON_SITELIBDIR%%/Bio/kMeans.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/kMeans.pyo
> %%PYTHON_SITELIBDIR%%/Bio/kNN.py
> %%PYTHON_SITELIBDIR%%/Bio/kNN.pyc
> %%PYTHON_SITELIBDIR%%/Bio/kNN.pyo
>@@ -1093,9 +1069,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/pairwise2.py
> %%PYTHON_SITELIBDIR%%/Bio/pairwise2.pyc
> %%PYTHON_SITELIBDIR%%/Bio/pairwise2.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/sequtils.py
>-%%PYTHON_SITELIBDIR%%/Bio/sequtils.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/sequtils.pyo
> %%PYTHON_SITELIBDIR%%/Bio/stringfns.py
> %%PYTHON_SITELIBDIR%%/Bio/stringfns.pyc
> %%PYTHON_SITELIBDIR%%/Bio/stringfns.pyo
>@@ -1121,9 +1094,6 @@
> %%PYTHON_SITELIBDIR%%/Bio/writers/__init__.py
> %%PYTHON_SITELIBDIR%%/Bio/writers/__init__.pyc
> %%PYTHON_SITELIBDIR%%/Bio/writers/__init__.pyo
>-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.py
>-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.pyc
>-%%PYTHON_SITELIBDIR%%/Bio/xkMeans.pyo
> %%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.py
> %%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.pyc
> %%PYTHON_SITELIBDIR%%/BioSQL/BioSeq.pyo
>@@ -1184,92 +1154,91 @@
> %%PYTHON_SITELIBDIR%%/Martel/setup.py
> %%PYTHON_SITELIBDIR%%/Martel/setup.pyc
> %%PYTHON_SITELIBDIR%%/Martel/setup.pyo
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Affy
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Ais
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Align
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/AlignAce
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Alphabet
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Application
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Blast
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/CAPS
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/CDD
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Clustalw
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Cluster
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/ECell
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Enzyme
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/FSSP
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Fasta
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Crossover
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Mutation
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Repair
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Selection
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GFF
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/GenBank
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Geo
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Gobase
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Graphics
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/HMM
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/IntelliGenetics
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/InterPro
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Compound
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Enzyme
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Map
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Kabat
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/LocusLink
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/MEME
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Medline
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/MetaTool
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Mindy
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/MultiProc
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/NBRF
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Ndb
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Nexus
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB/mmCIF
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Parsers
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway/Rep
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Prosite
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Rebase
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction/_Update
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SCOP
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Saf
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/WWW
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/Search
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/SeqRecord
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/config
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/dbdefs
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/blast
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/embl
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/swissprot
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions
>-@dirrm %%PYTHON_SITELIBDIR%%/Bio/formatdefs
>+@dirrm %%PYTHON_SITELIBDIR%%/Martel
>+@dirrm %%PYTHON_SITELIBDIR%%/BioSQL
> @dirrm %%PYTHON_SITELIBDIR%%/Bio/writers/SeqRecord
> @dirrm %%PYTHON_SITELIBDIR%%/Bio/writers
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/formatdefs
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/swissprot
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/embl
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions/blast
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/expressions
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/dbdefs
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/config
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/SeqRecord
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders/Search
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/builders
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Wise
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/WWW
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/UniGene
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SwissProt
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SubsMat
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Statistics
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Sequencing
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqUtils
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SeqIO
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Saf
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SVDSuperimposer
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/SCOP
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction/_Update
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Restriction
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Rebase
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Prosite
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway/Rep
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Pathway
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Parsers
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/PDB
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Nexus
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/Gene
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork/BackPropagation
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/NeuralNetwork
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Ndb
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/NMR
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/NBRF
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/MultiProc
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Mindy
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/MetaTool
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Medline
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/MEME
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/LocusLink
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Kabat
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Map
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Enzyme
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG/Compound
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/KEGG
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/InterPro
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/IntelliGenetics
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/HMM
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Graphics
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Gobase
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Geo
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GenBank
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GFF
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Selection
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Repair
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Mutation
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA/Crossover
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/GA
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Fasta
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/FSSP
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Enzyme
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Encodings
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Emboss
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils/DTDs
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/EUtils
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/ECell
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Data
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Crystal
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Compass
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Cluster
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Clustalw
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/CDD
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/CAPS
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Blast
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Application
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Alphabet
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/AlignAce
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Align
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Ais
>+@dirrm %%PYTHON_SITELIBDIR%%/Bio/Affy
> @dirrm %%PYTHON_SITELIBDIR%%/Bio
>-@dirrm %%PYTHON_SITELIBDIR%%/BioSQL
>-@dirrm %%PYTHON_SITELIBDIR%%/Martel

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Attachments on bug 104635: 71919