diff -ruN --exclude=CVS /usr/ports/science/avogadro/Makefile /usr/home/tkjacobsen/avogadro/Makefile --- /usr/ports/science/avogadro/Makefile 2009-06-04 18:28:31.000000000 +0200 +++ /usr/home/tkjacobsen/avogadro/Makefile 2009-06-04 18:05:28.000000000 +0200 @@ -1,12 +1,12 @@ # New ports collection makefile for: avogadro -# Date created: 19 May 2009 +# Date created: 4 June 2009 # Whom: Troels Kofoed Jacobsen # # $FreeBSD: ports/science/avogadro/Makefile,v 1.1 2009/05/22 22:16:46 amdmi3 Exp $ # PORTNAME= avogadro -PORTVERSION= 0.9.4 +PORTVERSION= 0.9.5 CATEGORIES= science MASTER_SITES= SF diff -ruN --exclude=CVS /usr/ports/science/avogadro/distinfo /usr/home/tkjacobsen/avogadro/distinfo --- /usr/ports/science/avogadro/distinfo 2009-06-04 18:28:31.000000000 +0200 +++ /usr/home/tkjacobsen/avogadro/distinfo 2009-06-04 17:54:26.000000000 +0200 @@ -1,3 +1,3 @@ -MD5 (avogadro-0.9.4.tar.bz2) = 021809bd6498d167cd3bed51610572f2 -SHA256 (avogadro-0.9.4.tar.bz2) = 49025aa4e880930e31f9f86550e5d8da2aa2df11c5c555a55d4dc8e938a18778 -SIZE (avogadro-0.9.4.tar.bz2) = 4109405 +MD5 (avogadro-0.9.5.tar.bz2) = ff147ab06d75bfd48cd6fe0a6d7e523b +SHA256 (avogadro-0.9.5.tar.bz2) = 8c6e811c9c904780c90291a70e0c3be31e2808e7340ac523c98c5711011cc01e +SIZE (avogadro-0.9.5.tar.bz2) = 4712828 diff -ruN --exclude=CVS /usr/ports/science/avogadro/pkg-plist /usr/home/tkjacobsen/avogadro/pkg-plist --- /usr/ports/science/avogadro/pkg-plist 2009-06-04 18:28:31.000000000 +0200 +++ /usr/home/tkjacobsen/avogadro/pkg-plist 2009-06-04 17:54:26.000000000 +0200 @@ -12,15 +12,17 @@ include/avogadro/filetreeitem.h include/avogadro/fragment.h include/avogadro/glgraphicsview.h +include/avogadro/glhit.h include/avogadro/global.h include/avogadro/glwidget.h include/avogadro/idlist.h -include/avogadro/line.h include/avogadro/mesh.h include/avogadro/meshgenerator.h include/avogadro/molecule.h +include/avogadro/moleculefile.h include/avogadro/navigate.h include/avogadro/neighborlist.h +include/avogadro/openbabelwrapper.h include/avogadro/painter.h include/avogadro/painterdevice.h include/avogadro/periodictableview.h @@ -30,9 +32,7 @@ include/avogadro/plotwidget.h include/avogadro/plugin.h include/avogadro/pluginmanager.h -include/avogadro/point.h include/avogadro/primitive.h -include/avogadro/primitiveitemmodel.h include/avogadro/primitivelist.h include/avogadro/protein.h include/avogadro/pythonerror.h @@ -45,13 +45,15 @@ include/avogadro/zmatrix.h lib/avogadro/AvogadroBuildSettings.cmake lib/avogadro/AvogadroConfig.cmake +lib/avogadro/AvogadroConfigVersion.cmake lib/avogadro/AvogadroLibraryDeps.cmake lib/avogadro/AvogadroUse.cmake lib/avogadro/cmake/FindEigen2.cmake lib/avogadro/cmake/FindGLEW.cmake +lib/avogadro/colors/atomindexcolor.so lib/avogadro/colors/chargecolor.so +lib/avogadro/colors/customcolor.so lib/avogadro/colors/distancecolor.so -lib/avogadro/colors/indexcolor.so lib/avogadro/colors/residuecolor.so lib/avogadro/engines/axesengine.so lib/avogadro/engines/cartoonengine.so @@ -76,6 +78,9 @@ lib/avogadro/extensions/gaussianextension.so lib/avogadro/extensions/h2methylextension.so lib/avogadro/extensions/hydrogenextension.so +lib/avogadro/extensions/insertfragmentextension.so +lib/avogadro/extensions/insertpeptideextension.so +lib/avogadro/extensions/molecularpropextension.so lib/avogadro/extensions/networkfetchextension.so lib/avogadro/extensions/orbitalextension.so lib/avogadro/extensions/povrayextension.so @@ -97,8 +102,50 @@ lib/avogadro/tools/selectrotatetool.so lib/libavogadro.so lib/libavogadro.so.0 -lib/libavogadro.so.0.9.4 -%%PYTHON_SITELIBDIR%%/Avogadro.so +lib/libavogadro.so.0.9.5 +%%PYTHON_SITELIBDIR%%/_Avogadro.so +%%PYTHON_SITELIBDIR%%/Avogadro.py +%%DATADIR%%/builder/amino/d-ala.zmat +%%DATADIR%%/builder/amino/d-arg.zmat +%%DATADIR%%/builder/amino/d-asn.zmat +%%DATADIR%%/builder/amino/d-asp.zmat +%%DATADIR%%/builder/amino/d-cys.zmat +%%DATADIR%%/builder/amino/d-gln.zmat +%%DATADIR%%/builder/amino/d-glu.zmat +%%DATADIR%%/builder/amino/d-his.zmat +%%DATADIR%%/builder/amino/d-ile.zmat +%%DATADIR%%/builder/amino/d-leu.zmat +%%DATADIR%%/builder/amino/d-lys.zmat +%%DATADIR%%/builder/amino/d-met.zmat +%%DATADIR%%/builder/amino/d-phe.zmat +%%DATADIR%%/builder/amino/d-pro.zmat +%%DATADIR%%/builder/amino/d-ser.zmat +%%DATADIR%%/builder/amino/d-thr.zmat +%%DATADIR%%/builder/amino/d-trp.zmat +%%DATADIR%%/builder/amino/d-tyr.zmat +%%DATADIR%%/builder/amino/d-val.zmat +%%DATADIR%%/builder/amino/gly.zmat +%%DATADIR%%/builder/amino/l-ala.zmat +%%DATADIR%%/builder/amino/l-arg.zmat +%%DATADIR%%/builder/amino/l-asn.zmat +%%DATADIR%%/builder/amino/l-asp.zmat +%%DATADIR%%/builder/amino/l-cys.zmat +%%DATADIR%%/builder/amino/l-gln.zmat +%%DATADIR%%/builder/amino/l-glu.zmat +%%DATADIR%%/builder/amino/l-his.zmat +%%DATADIR%%/builder/amino/l-ile.zmat +%%DATADIR%%/builder/amino/l-leu.zmat +%%DATADIR%%/builder/amino/l-lys.zmat +%%DATADIR%%/builder/amino/l-met.zmat +%%DATADIR%%/builder/amino/l-phe.zmat +%%DATADIR%%/builder/amino/l-pro.zmat +%%DATADIR%%/builder/amino/l-pyl.zmat +%%DATADIR%%/builder/amino/l-sec.zmat +%%DATADIR%%/builder/amino/l-ser.zmat +%%DATADIR%%/builder/amino/l-thr.zmat +%%DATADIR%%/builder/amino/l-trp.zmat +%%DATADIR%%/builder/amino/l-tyr.zmat +%%DATADIR%%/builder/amino/l-val.zmat %%DATADIR%%/fragments/alcohols/ethanol.cml %%DATADIR%%/fragments/alcohols/methanol.cml %%DATADIR%%/fragments/alcohols/propan-1-ol.cml @@ -279,13 +326,16 @@ %%DATADIR%%/fragments/thiols/pentane-1-thiol.cml %%DATADIR%%/fragments/water.cml %%DATADIR%%/i18n/avogadro_ar.qm +%%DATADIR%%/i18n/avogadro_bg.qm %%DATADIR%%/i18n/avogadro_ca.qm %%DATADIR%%/i18n/avogadro_cs.qm %%DATADIR%%/i18n/avogadro_de.qm +%%DATADIR%%/i18n/avogadro_en_CA.qm %%DATADIR%%/i18n/avogadro_en_GB.qm %%DATADIR%%/i18n/avogadro_es.qm %%DATADIR%%/i18n/avogadro_fi.qm %%DATADIR%%/i18n/avogadro_fr.qm +%%DATADIR%%/i18n/avogadro_id.qm %%DATADIR%%/i18n/avogadro_it.qm %%DATADIR%%/i18n/avogadro_ja.qm %%DATADIR%%/i18n/avogadro_ko.qm @@ -295,15 +345,40 @@ %%DATADIR%%/i18n/avogadro_pt.qm %%DATADIR%%/i18n/avogadro_pt_BR.qm %%DATADIR%%/i18n/avogadro_ru.qm +%%DATADIR%%/i18n/avogadro_sk.qm %%DATADIR%%/i18n/avogadro_sv.qm %%DATADIR%%/i18n/avogadro_tr.qm %%DATADIR%%/i18n/avogadro_uk.qm %%DATADIR%%/i18n/avogadro_zh_CN.qm %%DATADIR%%/i18n/avogadro_zh_TW.qm +%%DATADIR%%/i18n/libavogadro_ar.qm +%%DATADIR%%/i18n/libavogadro_bg.qm +%%DATADIR%%/i18n/libavogadro_ca.qm +%%DATADIR%%/i18n/libavogadro_cs.qm +%%DATADIR%%/i18n/libavogadro_de.qm +%%DATADIR%%/i18n/libavogadro_en_CA.qm +%%DATADIR%%/i18n/libavogadro_en_GB.qm +%%DATADIR%%/i18n/libavogadro_es.qm +%%DATADIR%%/i18n/libavogadro_fi.qm +%%DATADIR%%/i18n/libavogadro_fr.qm +%%DATADIR%%/i18n/libavogadro_id.qm +%%DATADIR%%/i18n/libavogadro_it.qm +%%DATADIR%%/i18n/libavogadro_ja.qm +%%DATADIR%%/i18n/libavogadro_ko.qm +%%DATADIR%%/i18n/libavogadro_nb.qm +%%DATADIR%%/i18n/libavogadro_nl.qm +%%DATADIR%%/i18n/libavogadro_pl.qm +%%DATADIR%%/i18n/libavogadro_pt.qm +%%DATADIR%%/i18n/libavogadro_pt_BR.qm +%%DATADIR%%/i18n/libavogadro_ru.qm +%%DATADIR%%/i18n/libavogadro_sk.qm +%%DATADIR%%/i18n/libavogadro_sv.qm +%%DATADIR%%/i18n/libavogadro_tr.qm +%%DATADIR%%/i18n/libavogadro_uk.qm +%%DATADIR%%/i18n/libavogadro_zh_CN.qm +%%DATADIR%%/i18n/libavogadro_zh_TW.qm share/libavogadro/engineScripts/wireframe.py share/libavogadro/extensionScripts/example.py -share/libavogadro/toolScripts/template.py -@dirrm share/libavogadro/toolScripts @dirrm share/libavogadro/extensionScripts @dirrm share/libavogadro/engineScripts @dirrm share/libavogadro @@ -332,6 +407,8 @@ @dirrm %%DATADIR%%/fragments/aldehydes @dirrm %%DATADIR%%/fragments/alcohols @dirrm %%DATADIR%%/fragments +@dirrm %%DATADIR%%/builder/amino +@dirrm %%DATADIR%%/builder @dirrm %%DATADIR%% @dirrm lib/avogadro/tools @dirrm lib/avogadro/extensions