Attachment 96624 Details for Bug 135263 – avogadro-0.9.5.patch

[patch] avogadro-0.9.5.patch

avogadro-0.9.5.patch (text/plain), 7.70 KB, created by Troels Kofoed Jacobsen on 2009-06-04 17:50:01 UTC

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Creator: Troels Kofoed Jacobsen

Created: 2009-06-04 17:50:01 UTC

Size: 7.70 KB

patch

obsolete

>diff -ruN --exclude=CVS /usr/ports/science/avogadro/Makefile /usr/home/tkjacobsen/avogadro/Makefile
>--- /usr/ports/science/avogadro/Makefile	2009-06-04 18:28:31.000000000 +0200
>+++ /usr/home/tkjacobsen/avogadro/Makefile	2009-06-04 18:05:28.000000000 +0200
>@@ -1,12 +1,12 @@
> # New ports collection makefile for:   avogadro
>-# Date created:        19 May 2009
>+# Date created:        4 June 2009
> # Whom:                Troels Kofoed Jacobsen <tkjacobsen@gmail.com>
> #
> # $FreeBSD: ports/science/avogadro/Makefile,v 1.1 2009/05/22 22:16:46 amdmi3 Exp $
> #
> 
> PORTNAME=	avogadro
>-PORTVERSION=	0.9.4
>+PORTVERSION=	0.9.5
> CATEGORIES=	science
> MASTER_SITES=	SF
> 
>diff -ruN --exclude=CVS /usr/ports/science/avogadro/distinfo /usr/home/tkjacobsen/avogadro/distinfo
>--- /usr/ports/science/avogadro/distinfo	2009-06-04 18:28:31.000000000 +0200
>+++ /usr/home/tkjacobsen/avogadro/distinfo	2009-06-04 17:54:26.000000000 +0200
>@@ -1,3 +1,3 @@
>-MD5 (avogadro-0.9.4.tar.bz2) = 021809bd6498d167cd3bed51610572f2
>-SHA256 (avogadro-0.9.4.tar.bz2) = 49025aa4e880930e31f9f86550e5d8da2aa2df11c5c555a55d4dc8e938a18778
>-SIZE (avogadro-0.9.4.tar.bz2) = 4109405
>+MD5 (avogadro-0.9.5.tar.bz2) = ff147ab06d75bfd48cd6fe0a6d7e523b
>+SHA256 (avogadro-0.9.5.tar.bz2) = 8c6e811c9c904780c90291a70e0c3be31e2808e7340ac523c98c5711011cc01e
>+SIZE (avogadro-0.9.5.tar.bz2) = 4712828
>diff -ruN --exclude=CVS /usr/ports/science/avogadro/pkg-plist /usr/home/tkjacobsen/avogadro/pkg-plist
>--- /usr/ports/science/avogadro/pkg-plist	2009-06-04 18:28:31.000000000 +0200
>+++ /usr/home/tkjacobsen/avogadro/pkg-plist	2009-06-04 17:54:26.000000000 +0200
>@@ -12,15 +12,17 @@
> include/avogadro/filetreeitem.h
> include/avogadro/fragment.h
> include/avogadro/glgraphicsview.h
>+include/avogadro/glhit.h
> include/avogadro/global.h
> include/avogadro/glwidget.h
> include/avogadro/idlist.h
>-include/avogadro/line.h
> include/avogadro/mesh.h
> include/avogadro/meshgenerator.h
> include/avogadro/molecule.h
>+include/avogadro/moleculefile.h
> include/avogadro/navigate.h
> include/avogadro/neighborlist.h
>+include/avogadro/openbabelwrapper.h
> include/avogadro/painter.h
> include/avogadro/painterdevice.h
> include/avogadro/periodictableview.h
>@@ -30,9 +32,7 @@
> include/avogadro/plotwidget.h
> include/avogadro/plugin.h
> include/avogadro/pluginmanager.h
>-include/avogadro/point.h
> include/avogadro/primitive.h
>-include/avogadro/primitiveitemmodel.h
> include/avogadro/primitivelist.h
> include/avogadro/protein.h
> include/avogadro/pythonerror.h
>@@ -45,13 +45,15 @@
> include/avogadro/zmatrix.h
> lib/avogadro/AvogadroBuildSettings.cmake
> lib/avogadro/AvogadroConfig.cmake
>+lib/avogadro/AvogadroConfigVersion.cmake
> lib/avogadro/AvogadroLibraryDeps.cmake
> lib/avogadro/AvogadroUse.cmake
> lib/avogadro/cmake/FindEigen2.cmake
> lib/avogadro/cmake/FindGLEW.cmake
>+lib/avogadro/colors/atomindexcolor.so
> lib/avogadro/colors/chargecolor.so
>+lib/avogadro/colors/customcolor.so
> lib/avogadro/colors/distancecolor.so
>-lib/avogadro/colors/indexcolor.so
> lib/avogadro/colors/residuecolor.so
> lib/avogadro/engines/axesengine.so
> lib/avogadro/engines/cartoonengine.so
>@@ -76,6 +78,9 @@
> lib/avogadro/extensions/gaussianextension.so
> lib/avogadro/extensions/h2methylextension.so
> lib/avogadro/extensions/hydrogenextension.so
>+lib/avogadro/extensions/insertfragmentextension.so
>+lib/avogadro/extensions/insertpeptideextension.so
>+lib/avogadro/extensions/molecularpropextension.so
> lib/avogadro/extensions/networkfetchextension.so
> lib/avogadro/extensions/orbitalextension.so
> lib/avogadro/extensions/povrayextension.so
>@@ -97,8 +102,50 @@
> lib/avogadro/tools/selectrotatetool.so
> lib/libavogadro.so
> lib/libavogadro.so.0
>-lib/libavogadro.so.0.9.4
>-%%PYTHON_SITELIBDIR%%/Avogadro.so
>+lib/libavogadro.so.0.9.5
>+%%PYTHON_SITELIBDIR%%/_Avogadro.so
>+%%PYTHON_SITELIBDIR%%/Avogadro.py
>+%%DATADIR%%/builder/amino/d-ala.zmat
>+%%DATADIR%%/builder/amino/d-arg.zmat
>+%%DATADIR%%/builder/amino/d-asn.zmat
>+%%DATADIR%%/builder/amino/d-asp.zmat
>+%%DATADIR%%/builder/amino/d-cys.zmat
>+%%DATADIR%%/builder/amino/d-gln.zmat
>+%%DATADIR%%/builder/amino/d-glu.zmat
>+%%DATADIR%%/builder/amino/d-his.zmat
>+%%DATADIR%%/builder/amino/d-ile.zmat
>+%%DATADIR%%/builder/amino/d-leu.zmat
>+%%DATADIR%%/builder/amino/d-lys.zmat
>+%%DATADIR%%/builder/amino/d-met.zmat
>+%%DATADIR%%/builder/amino/d-phe.zmat
>+%%DATADIR%%/builder/amino/d-pro.zmat
>+%%DATADIR%%/builder/amino/d-ser.zmat
>+%%DATADIR%%/builder/amino/d-thr.zmat
>+%%DATADIR%%/builder/amino/d-trp.zmat
>+%%DATADIR%%/builder/amino/d-tyr.zmat
>+%%DATADIR%%/builder/amino/d-val.zmat
>+%%DATADIR%%/builder/amino/gly.zmat
>+%%DATADIR%%/builder/amino/l-ala.zmat
>+%%DATADIR%%/builder/amino/l-arg.zmat
>+%%DATADIR%%/builder/amino/l-asn.zmat
>+%%DATADIR%%/builder/amino/l-asp.zmat
>+%%DATADIR%%/builder/amino/l-cys.zmat
>+%%DATADIR%%/builder/amino/l-gln.zmat
>+%%DATADIR%%/builder/amino/l-glu.zmat
>+%%DATADIR%%/builder/amino/l-his.zmat
>+%%DATADIR%%/builder/amino/l-ile.zmat
>+%%DATADIR%%/builder/amino/l-leu.zmat
>+%%DATADIR%%/builder/amino/l-lys.zmat
>+%%DATADIR%%/builder/amino/l-met.zmat
>+%%DATADIR%%/builder/amino/l-phe.zmat
>+%%DATADIR%%/builder/amino/l-pro.zmat
>+%%DATADIR%%/builder/amino/l-pyl.zmat
>+%%DATADIR%%/builder/amino/l-sec.zmat
>+%%DATADIR%%/builder/amino/l-ser.zmat
>+%%DATADIR%%/builder/amino/l-thr.zmat
>+%%DATADIR%%/builder/amino/l-trp.zmat
>+%%DATADIR%%/builder/amino/l-tyr.zmat
>+%%DATADIR%%/builder/amino/l-val.zmat
> %%DATADIR%%/fragments/alcohols/ethanol.cml
> %%DATADIR%%/fragments/alcohols/methanol.cml
> %%DATADIR%%/fragments/alcohols/propan-1-ol.cml
>@@ -279,13 +326,16 @@
> %%DATADIR%%/fragments/thiols/pentane-1-thiol.cml
> %%DATADIR%%/fragments/water.cml
> %%DATADIR%%/i18n/avogadro_ar.qm
>+%%DATADIR%%/i18n/avogadro_bg.qm
> %%DATADIR%%/i18n/avogadro_ca.qm
> %%DATADIR%%/i18n/avogadro_cs.qm
> %%DATADIR%%/i18n/avogadro_de.qm
>+%%DATADIR%%/i18n/avogadro_en_CA.qm
> %%DATADIR%%/i18n/avogadro_en_GB.qm
> %%DATADIR%%/i18n/avogadro_es.qm
> %%DATADIR%%/i18n/avogadro_fi.qm
> %%DATADIR%%/i18n/avogadro_fr.qm
>+%%DATADIR%%/i18n/avogadro_id.qm
> %%DATADIR%%/i18n/avogadro_it.qm
> %%DATADIR%%/i18n/avogadro_ja.qm
> %%DATADIR%%/i18n/avogadro_ko.qm
>@@ -295,15 +345,40 @@
> %%DATADIR%%/i18n/avogadro_pt.qm
> %%DATADIR%%/i18n/avogadro_pt_BR.qm
> %%DATADIR%%/i18n/avogadro_ru.qm
>+%%DATADIR%%/i18n/avogadro_sk.qm
> %%DATADIR%%/i18n/avogadro_sv.qm
> %%DATADIR%%/i18n/avogadro_tr.qm
> %%DATADIR%%/i18n/avogadro_uk.qm
> %%DATADIR%%/i18n/avogadro_zh_CN.qm
> %%DATADIR%%/i18n/avogadro_zh_TW.qm
>+%%DATADIR%%/i18n/libavogadro_ar.qm
>+%%DATADIR%%/i18n/libavogadro_bg.qm
>+%%DATADIR%%/i18n/libavogadro_ca.qm
>+%%DATADIR%%/i18n/libavogadro_cs.qm
>+%%DATADIR%%/i18n/libavogadro_de.qm
>+%%DATADIR%%/i18n/libavogadro_en_CA.qm
>+%%DATADIR%%/i18n/libavogadro_en_GB.qm
>+%%DATADIR%%/i18n/libavogadro_es.qm
>+%%DATADIR%%/i18n/libavogadro_fi.qm
>+%%DATADIR%%/i18n/libavogadro_fr.qm
>+%%DATADIR%%/i18n/libavogadro_id.qm
>+%%DATADIR%%/i18n/libavogadro_it.qm
>+%%DATADIR%%/i18n/libavogadro_ja.qm
>+%%DATADIR%%/i18n/libavogadro_ko.qm
>+%%DATADIR%%/i18n/libavogadro_nb.qm
>+%%DATADIR%%/i18n/libavogadro_nl.qm
>+%%DATADIR%%/i18n/libavogadro_pl.qm
>+%%DATADIR%%/i18n/libavogadro_pt.qm
>+%%DATADIR%%/i18n/libavogadro_pt_BR.qm
>+%%DATADIR%%/i18n/libavogadro_ru.qm
>+%%DATADIR%%/i18n/libavogadro_sk.qm
>+%%DATADIR%%/i18n/libavogadro_sv.qm
>+%%DATADIR%%/i18n/libavogadro_tr.qm
>+%%DATADIR%%/i18n/libavogadro_uk.qm
>+%%DATADIR%%/i18n/libavogadro_zh_CN.qm
>+%%DATADIR%%/i18n/libavogadro_zh_TW.qm
> share/libavogadro/engineScripts/wireframe.py
> share/libavogadro/extensionScripts/example.py
>-share/libavogadro/toolScripts/template.py
>-@dirrm share/libavogadro/toolScripts
> @dirrm share/libavogadro/extensionScripts
> @dirrm share/libavogadro/engineScripts
> @dirrm share/libavogadro
>@@ -332,6 +407,8 @@
> @dirrm %%DATADIR%%/fragments/aldehydes
> @dirrm %%DATADIR%%/fragments/alcohols
> @dirrm %%DATADIR%%/fragments
>+@dirrm %%DATADIR%%/builder/amino
>+@dirrm %%DATADIR%%/builder
> @dirrm %%DATADIR%%
> @dirrm lib/avogadro/tools
> @dirrm lib/avogadro/extensions

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Attachments on bug 135263: 96624