Bug 240937
| Summary: | math/py-numpy: enable OPENBLAS by default | ||||||
|---|---|---|---|---|---|---|---|
| Product: | Ports & Packages | Reporter: | Jan Beich <jbeich> | ||||
| Component: | Individual Port(s) | Assignee: | Jan Beich <jbeich> | ||||
| Status: | Closed FIXED | ||||||
| Severity: | Affects Only Me | CC: | rhurlin, swills | ||||
| Priority: | --- | Keywords: | patch | ||||
| Version: | Latest | Flags: | bugzilla:
maintainer-feedback?
(python) jbeich: merge-quarterly? |
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| Hardware: | Any | ||||||
| OS: | Any | ||||||
| See Also: | https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=243497 | ||||||
| Bug Depends on: | 240899 | ||||||
| Bug Blocks: | 231371 | ||||||
| Attachments: |
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Description
Jan Beich
2019-09-30 10:31:57 UTC
This is timed out, please commit A commit references this bug: Author: jbeich Date: Thu Oct 24 00:48:42 UTC 2019 New revision: 515313 URL: https://svnweb.freebsd.org/changeset/ports/515313 Log: math/py-numpy: switch to OpenBLAS by default Besides being faster consistently using the same BLAS implementation should improve stability in case of accidental ABI mismatch. PR: 240937 Approved by: maintainer timeout (2 weeks) MFH: 2019Q4 Changes: head/math/py-numpy/Makefile A commit references this bug: Author: jbeich Date: Fri Oct 25 10:04:39 UTC 2019 New revision: 515595 URL: https://svnweb.freebsd.org/changeset/ports/515595 Log: math/py-pysparse: unbreak on non-LLD architectures after r515313 creating /tmp/tmp2txkG8/tmp creating /tmp/tmp2txkG8/tmp/tmp2txkG8 compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmp2txkG8/source.c cc /tmp/tmp2txkG8/tmp/tmp2txkG8/source.o -L/usr/local/lib -lcblas -o /tmp/tmp2txkG8/a.out /usr/local/lib/libcblas.so: undefined reference to `cgemv_' /usr/local/lib/libcblas.so: undefined reference to `cscal_' /usr/local/lib/libcblas.so: undefined reference to `sdot_' /usr/local/lib/libcblas.so: undefined reference to `dtrmm_' /usr/local/lib/libcblas.so: undefined reference to `zhpr_' /usr/local/lib/libcblas.so: undefined reference to `snrm2_' /usr/local/lib/libcblas.so: undefined reference to `zherk_' /usr/local/lib/libcblas.so: undefined reference to `sspmv_' /usr/local/lib/libcblas.so: undefined reference to `cswap_' /usr/local/lib/libcblas.so: undefined reference to `dswap_' /usr/local/lib/libcblas.so: undefined reference to `dgemm_' /usr/local/lib/libcblas.so: undefined reference to `ztrmv_' /usr/local/lib/libcblas.so: undefined reference to `zgbmv_' /usr/local/lib/libcblas.so: undefined reference to `ctbsv_' /usr/local/lib/libcblas.so: undefined reference to `dger_' /usr/local/lib/libcblas.so: undefined reference to `dtpsv_' /usr/local/lib/libcblas.so: undefined reference to `sspr_' /usr/local/lib/libcblas.so: undefined reference to `cher_' /usr/local/lib/libcblas.so: undefined reference to `caxpy_' /usr/local/lib/libcblas.so: undefined reference to `ztpsv_' /usr/local/lib/libcblas.so: undefined reference to `zscal_' /usr/local/lib/libcblas.so: undefined reference to `sswap_' /usr/local/lib/libcblas.so: undefined reference to `ctpsv_' /usr/local/lib/libcblas.so: undefined reference to `dzasum_' /usr/local/lib/libcblas.so: undefined reference to `daxpy_' /usr/local/lib/libcblas.so: undefined reference to `ctrsv_' /usr/local/lib/libcblas.so: undefined reference to `izamax_' /usr/local/lib/libcblas.so: undefined reference to `sasum_' /usr/local/lib/libcblas.so: undefined reference to `drotg_' /usr/local/lib/libcblas.so: undefined reference to `dsymm_' /usr/local/lib/libcblas.so: undefined reference to `zhpr2_' /usr/local/lib/libcblas.so: undefined reference to `stpsv_' /usr/local/lib/libcblas.so: undefined reference to `ssbmv_' /usr/local/lib/libcblas.so: undefined reference to `cgbmv_' /usr/local/lib/libcblas.so: undefined reference to `zhbmv_' /usr/local/lib/libcblas.so: undefined reference to `srotmg_' /usr/local/lib/libcblas.so: undefined reference to `cgemm_' /usr/local/lib/libcblas.so: undefined reference to `dtpmv_' /usr/local/lib/libcblas.so: undefined reference to `chemv_' /usr/local/lib/libcblas.so: undefined reference to `ssyr2_' /usr/local/lib/libcblas.so: undefined reference to `ctbmv_' /usr/local/lib/libcblas.so: undefined reference to `saxpy_' /usr/local/lib/libcblas.so: undefined reference to `drotm_' /usr/local/lib/libcblas.so: undefined reference to `dnrm2_' /usr/local/lib/libcblas.so: undefined reference to `ctrmm_' /usr/local/lib/libcblas.so: undefined reference to `ztbsv_' /usr/local/lib/libcblas.so: undefined reference to `dtrsv_' /usr/local/lib/libcblas.so: undefined reference to `zdotu_' /usr/local/lib/libcblas.so: undefined reference to `dsyr_' /usr/local/lib/libcblas.so: undefined reference to `srot_' /usr/local/lib/libcblas.so: undefined reference to `ccopy_' /usr/local/lib/libcblas.so: undefined reference to `zgeru_' /usr/local/lib/libcblas.so: undefined reference to `zhpmv_' /usr/local/lib/libcblas.so: undefined reference to `csyr2k_' /usr/local/lib/libcblas.so: undefined reference to `ctrsm_' /usr/local/lib/libcblas.so: undefined reference to `sscal_' /usr/local/lib/libcblas.so: undefined reference to `cgerc_' /usr/local/lib/libcblas.so: undefined reference to `dcopy_' /usr/local/lib/libcblas.so: undefined reference to `scnrm2_' /usr/local/lib/libcblas.so: undefined reference to `zgemm_' /usr/local/lib/libcblas.so: undefined reference to `sgbmv_' /usr/local/lib/libcblas.so: undefined reference to `sspr2_' /usr/local/lib/libcblas.so: undefined reference to `ztrsv_' /usr/local/lib/libcblas.so: undefined reference to `cgeru_' /usr/local/lib/libcblas.so: undefined reference to `dscal_' /usr/local/lib/libcblas.so: undefined reference to `dgbmv_' /usr/local/lib/libcblas.so: undefined reference to `chpr_' /usr/local/lib/libcblas.so: undefined reference to `zdscal_' /usr/local/lib/libcblas.so: undefined reference to `strmm_' /usr/local/lib/libcblas.so: undefined reference to `ssymm_' /usr/local/lib/libcblas.so: undefined reference to `zgemv_' /usr/local/lib/libcblas.so: undefined reference to `ddot_' /usr/local/lib/libcblas.so: undefined reference to `isamax_' /usr/local/lib/libcblas.so: undefined reference to `drotmg_' /usr/local/lib/libcblas.so: undefined reference to `zsyrk_' /usr/local/lib/libcblas.so: undefined reference to `stbsv_' /usr/local/lib/libcblas.so: undefined reference to `strsv_' /usr/local/lib/libcblas.so: undefined reference to `scasum_' /usr/local/lib/libcblas.so: undefined reference to `srotg_' /usr/local/lib/libcblas.so: undefined reference to `sdsdot_' /usr/local/lib/libcblas.so: undefined reference to `sgemm_' /usr/local/lib/libcblas.so: undefined reference to `scopy_' /usr/local/lib/libcblas.so: undefined reference to `zdotc_' /usr/local/lib/libcblas.so: undefined reference to `dsyr2k_' /usr/local/lib/libcblas.so: undefined reference to `dsyrk_' /usr/local/lib/libcblas.so: undefined reference to `csscal_' /usr/local/lib/libcblas.so: undefined reference to `dasum_' /usr/local/lib/libcblas.so: undefined reference to `ssyr_' /usr/local/lib/libcblas.so: undefined reference to `ssyr2k_' /usr/local/lib/libcblas.so: undefined reference to `dspr2_' /usr/local/lib/libcblas.so: undefined reference to `zher2_' /usr/local/lib/libcblas.so: undefined reference to `dtrsm_' /usr/local/lib/libcblas.so: undefined reference to `idamax_' /usr/local/lib/libcblas.so: undefined reference to `dtbsv_' /usr/local/lib/libcblas.so: undefined reference to `ctrmv_' /usr/local/lib/libcblas.so: undefined reference to `strmv_' /usr/local/lib/libcblas.so: undefined reference to `zaxpy_' /usr/local/lib/libcblas.so: undefined reference to `zher_' /usr/local/lib/libcblas.so: undefined reference to `ssymv_' /usr/local/lib/libcblas.so: undefined reference to `zhemm_' /usr/local/lib/libcblas.so: undefined reference to `dtrmv_' /usr/local/lib/libcblas.so: undefined reference to `zgerc_' /usr/local/lib/libcblas.so: undefined reference to `chemm_' /usr/local/lib/libcblas.so: undefined reference to `zher2k_' /usr/local/lib/libcblas.so: undefined reference to `ztpmv_' /usr/local/lib/libcblas.so: undefined reference to `zswap_' /usr/local/lib/libcblas.so: undefined reference to `dspmv_' /usr/local/lib/libcblas.so: undefined reference to `zsymm_' /usr/local/lib/libcblas.so: undefined reference to `ztrmm_' /usr/local/lib/libcblas.so: undefined reference to `dtbmv_' /usr/local/lib/libcblas.so: undefined reference to `dgemv_' /usr/local/lib/libcblas.so: undefined reference to `sgemv_' /usr/local/lib/libcblas.so: undefined reference to `chpr2_' /usr/local/lib/libcblas.so: undefined reference to `cdotu_' /usr/local/lib/libcblas.so: undefined reference to `ctpmv_' /usr/local/lib/libcblas.so: undefined reference to `cher2k_' /usr/local/lib/libcblas.so: undefined reference to `csymm_' /usr/local/lib/libcblas.so: undefined reference to `ztrsm_' /usr/local/lib/libcblas.so: undefined reference to `cherk_' /usr/local/lib/libcblas.so: undefined reference to `cdotc_' /usr/local/lib/libcblas.so: undefined reference to `dsbmv_' /usr/local/lib/libcblas.so: undefined reference to `csyrk_' /usr/local/lib/libcblas.so: undefined reference to `stpmv_' /usr/local/lib/libcblas.so: undefined reference to `chpmv_' /usr/local/lib/libcblas.so: undefined reference to `sger_' /usr/local/lib/libcblas.so: undefined reference to `cher2_' /usr/local/lib/libcblas.so: undefined reference to `zsyr2k_' /usr/local/lib/libcblas.so: undefined reference to `strsm_' /usr/local/lib/libcblas.so: undefined reference to `dznrm2_' /usr/local/lib/libcblas.so: undefined reference to `stbmv_' /usr/local/lib/libcblas.so: undefined reference to `chbmv_' /usr/local/lib/libcblas.so: undefined reference to `dsyr2_' /usr/local/lib/libcblas.so: undefined reference to `dsdot_' /usr/local/lib/libcblas.so: undefined reference to `zcopy_' /usr/local/lib/libcblas.so: undefined reference to `dspr_' /usr/local/lib/libcblas.so: undefined reference to `icamax_' /usr/local/lib/libcblas.so: undefined reference to `dsymv_' /usr/local/lib/libcblas.so: undefined reference to `zhemv_' /usr/local/lib/libcblas.so: undefined reference to `ssyrk_' /usr/local/lib/libcblas.so: undefined reference to `srotm_' /usr/local/lib/libcblas.so: undefined reference to `drot_' /usr/local/lib/libcblas.so: undefined reference to `ztbmv_' cc: error: linker command failed with exit code 1 (use -v to see invocation) cc /tmp/tmp2txkG8/tmp/tmp2txkG8/source.o -L/usr/local/lib -lblas -o /tmp/tmp2txkG8/a.out /tmp/tmp2txkG8/tmp/tmp2txkG8/source.o: In function `main': source.c:(.text+0x5c): undefined reference to `cblas_ddot' cc: error: linker command failed with exit code 1 (use -v to see invocation) Traceback (most recent call last): File "<string>", line 1, in <module> File "setup.py", line 163, in <module> setup_package() File "setup.py", line 153, in setup_package configuration=configuration, File "/usr/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 137, in setup config = configuration() File "setup.py", line 62, in configuration config.add_subpackage('pysparse') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1036, in add_subpackage caller_level = 2) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1005, in get_subpackage caller_level = caller_level + 1) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "pysparse/setup.py", line 11, in configuration config.add_subpackage('sparse') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1036, in add_subpackage caller_level = 2) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1005, in get_subpackage caller_level = caller_level + 1) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "pysparse/sparse/setup.py", line 19, in configuration blas_info = get_info('blas_opt',0) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 448, in get_info return cl().get_info(notfound_action) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 641, in get_info self.calc_info() File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1661, in calc_info blas_info = get_info('blas') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 448, in get_info return cl().get_info(notfound_action) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 641, in get_info self.calc_info() File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1697, in calc_info lib = self.has_cblas(info) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1740, in has_cblas extra_postargs=info.get('extra_link_args', [])) File "/usr/local/lib/python2.7/distutils/ccompiler.py", line 700, in link_executable debug, extra_preargs, extra_postargs, None, target_lang) File "/usr/local/lib/python2.7/distutils/unixccompiler.py", line 202, in link raise LinkError, msg distutils.errors.LinkError: Command "cc /tmp/tmp2txkG8/tmp/tmp2txkG8/source.o -L/usr/local/lib -lblas -o /tmp/tmp2txkG8/a.out" failed with exit status 1 PR: 240937 Reported by: pkg-fallout Changes: head/math/py-pysparse/Makefile A commit references this bug: Author: jbeich Date: Fri Oct 25 15:40:37 UTC 2019 New revision: 515615 URL: https://svnweb.freebsd.org/changeset/ports/515615 Log: math/py-scikit-umfpack: unbreak on non-LLD architectures after r515313 creating /tmp/tmpFiVPVw/tmp creating /tmp/tmpFiVPVw/tmp/tmpFiVPVw compile options: '-I/usr/include -I/usr/local/include -I/usr/local/include/suitesparse -c' cc: /tmp/tmpFiVPVw/source.c cc /tmp/tmpFiVPVw/tmp/tmpFiVPVw/source.o -L/usr/local/lib -lcblas -o /tmp/tmpFiVPVw/a.out /usr/local/lib/libcblas.so: undefined reference to `cgemv_' /usr/local/lib/libcblas.so: undefined reference to `cscal_' /usr/local/lib/libcblas.so: undefined reference to `sdot_' /usr/local/lib/libcblas.so: undefined reference to `dtrmm_' /usr/local/lib/libcblas.so: undefined reference to `zhpr_' /usr/local/lib/libcblas.so: undefined reference to `snrm2_' /usr/local/lib/libcblas.so: undefined reference to `zherk_' /usr/local/lib/libcblas.so: undefined reference to `sspmv_' /usr/local/lib/libcblas.so: undefined reference to `cswap_' /usr/local/lib/libcblas.so: undefined reference to `dswap_' /usr/local/lib/libcblas.so: undefined reference to `dgemm_' /usr/local/lib/libcblas.so: undefined reference to `ztrmv_' /usr/local/lib/libcblas.so: undefined reference to `zgbmv_' /usr/local/lib/libcblas.so: undefined reference to `ctbsv_' /usr/local/lib/libcblas.so: undefined reference to `dger_' /usr/local/lib/libcblas.so: undefined reference to `dtpsv_' /usr/local/lib/libcblas.so: undefined reference to `sspr_' /usr/local/lib/libcblas.so: undefined reference to `cher_' /usr/local/lib/libcblas.so: undefined reference to `caxpy_' /usr/local/lib/libcblas.so: undefined reference to `ztpsv_' /usr/local/lib/libcblas.so: undefined reference to `zscal_' /usr/local/lib/libcblas.so: undefined reference to `sswap_' /usr/local/lib/libcblas.so: undefined reference to `ctpsv_' /usr/local/lib/libcblas.so: undefined reference to `dzasum_' /usr/local/lib/libcblas.so: undefined reference to `daxpy_' /usr/local/lib/libcblas.so: undefined reference to `ctrsv_' /usr/local/lib/libcblas.so: undefined reference to `izamax_' /usr/local/lib/libcblas.so: undefined reference to `sasum_' /usr/local/lib/libcblas.so: undefined reference to `drotg_' /usr/local/lib/libcblas.so: undefined reference to `dsymm_' /usr/local/lib/libcblas.so: undefined reference to `zhpr2_' /usr/local/lib/libcblas.so: undefined reference to `stpsv_' /usr/local/lib/libcblas.so: undefined reference to `ssbmv_' /usr/local/lib/libcblas.so: undefined reference to `cgbmv_' /usr/local/lib/libcblas.so: undefined reference to `zhbmv_' /usr/local/lib/libcblas.so: undefined reference to `srotmg_' /usr/local/lib/libcblas.so: undefined reference to `cgemm_' /usr/local/lib/libcblas.so: undefined reference to `dtpmv_' /usr/local/lib/libcblas.so: undefined reference to `chemv_' /usr/local/lib/libcblas.so: undefined reference to `ssyr2_' /usr/local/lib/libcblas.so: undefined reference to `ctbmv_' /usr/local/lib/libcblas.so: undefined reference to `saxpy_' /usr/local/lib/libcblas.so: undefined reference to `drotm_' /usr/local/lib/libcblas.so: undefined reference to `dnrm2_' /usr/local/lib/libcblas.so: undefined reference to `ctrmm_' /usr/local/lib/libcblas.so: undefined reference to `ztbsv_' /usr/local/lib/libcblas.so: undefined reference to `dtrsv_' /usr/local/lib/libcblas.so: undefined reference to `zdotu_' /usr/local/lib/libcblas.so: undefined reference to `dsyr_' /usr/local/lib/libcblas.so: undefined reference to `srot_' /usr/local/lib/libcblas.so: undefined reference to `ccopy_' /usr/local/lib/libcblas.so: undefined reference to `zgeru_' /usr/local/lib/libcblas.so: undefined reference to `zhpmv_' /usr/local/lib/libcblas.so: undefined reference to `csyr2k_' /usr/local/lib/libcblas.so: undefined reference to `ctrsm_' /usr/local/lib/libcblas.so: undefined reference to `sscal_' /usr/local/lib/libcblas.so: undefined reference to `cgerc_' /usr/local/lib/libcblas.so: undefined reference to `dcopy_' /usr/local/lib/libcblas.so: undefined reference to `scnrm2_' /usr/local/lib/libcblas.so: undefined reference to `zgemm_' /usr/local/lib/libcblas.so: undefined reference to `sgbmv_' /usr/local/lib/libcblas.so: undefined reference to `sspr2_' /usr/local/lib/libcblas.so: undefined reference to `ztrsv_' /usr/local/lib/libcblas.so: undefined reference to `cgeru_' /usr/local/lib/libcblas.so: undefined reference to `dscal_' /usr/local/lib/libcblas.so: undefined reference to `dgbmv_' /usr/local/lib/libcblas.so: undefined reference to `chpr_' /usr/local/lib/libcblas.so: undefined reference to `zdscal_' /usr/local/lib/libcblas.so: undefined reference to `strmm_' /usr/local/lib/libcblas.so: undefined reference to `ssymm_' /usr/local/lib/libcblas.so: undefined reference to `zgemv_' /usr/local/lib/libcblas.so: undefined reference to `ddot_' /usr/local/lib/libcblas.so: undefined reference to `isamax_' /usr/local/lib/libcblas.so: undefined reference to `drotmg_' /usr/local/lib/libcblas.so: undefined reference to `zsyrk_' /usr/local/lib/libcblas.so: undefined reference to `stbsv_' /usr/local/lib/libcblas.so: undefined reference to `strsv_' /usr/local/lib/libcblas.so: undefined reference to `scasum_' /usr/local/lib/libcblas.so: undefined reference to `srotg_' /usr/local/lib/libcblas.so: undefined reference to `sdsdot_' /usr/local/lib/libcblas.so: undefined reference to `sgemm_' /usr/local/lib/libcblas.so: undefined reference to `scopy_' /usr/local/lib/libcblas.so: undefined reference to `zdotc_' /usr/local/lib/libcblas.so: undefined reference to `dsyr2k_' /usr/local/lib/libcblas.so: undefined reference to `dsyrk_' /usr/local/lib/libcblas.so: undefined reference to `csscal_' /usr/local/lib/libcblas.so: undefined reference to `dasum_' /usr/local/lib/libcblas.so: undefined reference to `ssyr_' /usr/local/lib/libcblas.so: undefined reference to `ssyr2k_' /usr/local/lib/libcblas.so: undefined reference to `dspr2_' /usr/local/lib/libcblas.so: undefined reference to `zher2_' /usr/local/lib/libcblas.so: undefined reference to `dtrsm_' /usr/local/lib/libcblas.so: undefined reference to `idamax_' /usr/local/lib/libcblas.so: undefined reference to `dtbsv_' /usr/local/lib/libcblas.so: undefined reference to `ctrmv_' /usr/local/lib/libcblas.so: undefined reference to `strmv_' /usr/local/lib/libcblas.so: undefined reference to `zaxpy_' /usr/local/lib/libcblas.so: undefined reference to `zher_' /usr/local/lib/libcblas.so: undefined reference to `ssymv_' /usr/local/lib/libcblas.so: undefined reference to `zhemm_' /usr/local/lib/libcblas.so: undefined reference to `dtrmv_' /usr/local/lib/libcblas.so: undefined reference to `zgerc_' /usr/local/lib/libcblas.so: undefined reference to `chemm_' /usr/local/lib/libcblas.so: undefined reference to `zher2k_' /usr/local/lib/libcblas.so: undefined reference to `ztpmv_' /usr/local/lib/libcblas.so: undefined reference to `zswap_' /usr/local/lib/libcblas.so: undefined reference to `dspmv_' /usr/local/lib/libcblas.so: undefined reference to `zsymm_' /usr/local/lib/libcblas.so: undefined reference to `ztrmm_' /usr/local/lib/libcblas.so: undefined reference to `dtbmv_' /usr/local/lib/libcblas.so: undefined reference to `dgemv_' /usr/local/lib/libcblas.so: undefined reference to `sgemv_' /usr/local/lib/libcblas.so: undefined reference to `chpr2_' /usr/local/lib/libcblas.so: undefined reference to `cdotu_' /usr/local/lib/libcblas.so: undefined reference to `ctpmv_' /usr/local/lib/libcblas.so: undefined reference to `cher2k_' /usr/local/lib/libcblas.so: undefined reference to `csymm_' /usr/local/lib/libcblas.so: undefined reference to `ztrsm_' /usr/local/lib/libcblas.so: undefined reference to `cherk_' /usr/local/lib/libcblas.so: undefined reference to `cdotc_' /usr/local/lib/libcblas.so: undefined reference to `dsbmv_' /usr/local/lib/libcblas.so: undefined reference to `csyrk_' /usr/local/lib/libcblas.so: undefined reference to `stpmv_' /usr/local/lib/libcblas.so: undefined reference to `chpmv_' /usr/local/lib/libcblas.so: undefined reference to `sger_' /usr/local/lib/libcblas.so: undefined reference to `cher2_' /usr/local/lib/libcblas.so: undefined reference to `zsyr2k_' /usr/local/lib/libcblas.so: undefined reference to `strsm_' /usr/local/lib/libcblas.so: undefined reference to `dznrm2_' /usr/local/lib/libcblas.so: undefined reference to `stbmv_' /usr/local/lib/libcblas.so: undefined reference to `chbmv_' /usr/local/lib/libcblas.so: undefined reference to `dsyr2_' /usr/local/lib/libcblas.so: undefined reference to `dsdot_' /usr/local/lib/libcblas.so: undefined reference to `zcopy_' /usr/local/lib/libcblas.so: undefined reference to `dspr_' /usr/local/lib/libcblas.so: undefined reference to `icamax_' /usr/local/lib/libcblas.so: undefined reference to `dsymv_' /usr/local/lib/libcblas.so: undefined reference to `zhemv_' /usr/local/lib/libcblas.so: undefined reference to `ssyrk_' /usr/local/lib/libcblas.so: undefined reference to `srotm_' /usr/local/lib/libcblas.so: undefined reference to `drot_' /usr/local/lib/libcblas.so: undefined reference to `ztbmv_' cc: error: linker command failed with exit code 1 (use -v to see invocation) cc /tmp/tmpFiVPVw/tmp/tmpFiVPVw/source.o -L/usr/local/lib -lblas -o /tmp/tmpFiVPVw/a.out /tmp/tmpFiVPVw/tmp/tmpFiVPVw/source.o: In function `main': source.c:(.text+0xd1): undefined reference to `cblas_ddot' cc: error: linker command failed with exit code 1 (use -v to see invocation) Traceback (most recent call last): File "<string>", line 1, in <module> File "setup.py", line 250, in <module> setup_package() File "setup.py", line 247, in setup_package setup(**metadata) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 137, in setup config = configuration() File "setup.py", line 143, in configuration config.add_subpackage('scikits.umfpack') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1036, in add_subpackage caller_level = 2) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1005, in get_subpackage caller_level = caller_level + 1) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "scikits/umfpack/setup.py", line 27, in configuration blas_info = get_info('blas_opt') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 448, in get_info return cl().get_info(notfound_action) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 641, in get_info self.calc_info() File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1661, in calc_info blas_info = get_info('blas') File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 448, in get_info return cl().get_info(notfound_action) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 641, in get_info self.calc_info() File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1697, in calc_info lib = self.has_cblas(info) File "/usr/local/lib/python2.7/site-packages/numpy/distutils/system_info.py", line 1740, in has_cblas extra_postargs=info.get('extra_link_args', [])) File "/usr/local/lib/python2.7/distutils/ccompiler.py", line 700, in link_executable debug, extra_preargs, extra_postargs, None, target_lang) File "/usr/local/lib/python2.7/distutils/unixccompiler.py", line 202, in link raise LinkError, msg distutils.errors.LinkError: Command "cc /tmp/tmpFiVPVw/tmp/tmpFiVPVw/source.o -L/usr/local/lib -lblas -o /tmp/tmpFiVPVw/a.out" failed with exit status 1 PR: 240937 Reported by: pkg-fallout Changes: head/math/py-scikit-umfpack/Makefile A commit references this bug: Author: jbeich Date: Fri Oct 25 15:41:01 UTC 2019 New revision: 515616 URL: https://svnweb.freebsd.org/changeset/ports/515616 Log: graphics/caffe: unbreak consumers after r515313 games/pachi-game-engine: In file included from caffe.cpp:12: In file included from /usr/local/include/caffe/caffe.hpp:9: In file included from /usr/local/include/caffe/filler.hpp:13: In file included from /usr/local/include/caffe/util/math_functions.hpp:11: /usr/local/include/caffe/util/mkl_alternate.hpp:14:10: fatal error: 'cblas.h' file not found #include <cblas.h> ^~~~~~~~~ PR: 240937 Reported by: pkg-fallout Changes: head/graphics/caffe/Makefile A commit references this bug: Author: jbeich Date: Wed Jan 22 12:52:56 UTC 2020 New revision: 523805 URL: https://svnweb.freebsd.org/changeset/ports/523805 Log: graphics/caffe: drop math/cblas dependency after r523749 PR: 231371 240937 Changes: head/graphics/caffe/Makefile |