Bug 243206
| Summary: | biology/muscle: update to 3.8.1551 | ||||||||
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| Product: | Ports & Packages | Reporter: | Motomichi Matsuzaki <mzaki> | ||||||
| Component: | Individual Port(s) | Assignee: | Fernando Apesteguía <fernape> | ||||||
| Status: | Closed FIXED | ||||||||
| Severity: | Affects Only Me | CC: | fernape | ||||||
| Priority: | --- | Keywords: | buildisok | ||||||
| Version: | Latest | ||||||||
| Hardware: | Any | ||||||||
| OS: | Any | ||||||||
| Attachments: |
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Maintainer informed via mail Build info is available at https://gitlab.com/swills/freebsd-ports/pipelines/107995755 A commit references this bug: Author: fernape Date: Mon Jan 13 17:42:23 UTC 2020 New revision: 522911 URL: https://svnweb.freebsd.org/changeset/ports/522911 Log: biology/muscle: update to 3.8.1551 * Bug fix for long sequences. * Unbreak '/dev/tty' problem during a build * Update maintainer's mail address PR: 243206 Submitted by: mzaki@e-mail.ne.jp (maintainer) Changes: head/biology/muscle/Makefile head/biology/muscle/distinfo head/biology/muscle/files/patch-Makefile head/biology/muscle/files/patch-globalslinux.cpp head/biology/muscle/files/patch-mk Committed, Thanks! Created attachment 210754 [details]
a patch for fixing build on -current
pkg-fallout reported a build failure on 13.0-CURRENT,
so this is the fix.
(In reply to Motomichi Matsuzaki from comment #5) Weird, I always test on -CURRENT. I tested in r356220 and builds just fine. I will try to update to a more recent revision and retest. (In reply to Fernando Apesteguía from comment #6) I have tested on r356528 amd64 (freshly installed on bhyve). The previous version failed, and the patched one succeeded. Anyway, the source file subfams.cpp seems completely unused, and it is not necessary to compile & link it, whenever it fails or not. (In reply to Motomichi Matsuzaki from comment #7) OK, I'll do it today. Just for the record, in CURRENT r356762 builds fine for me. A commit references this bug: Author: fernape Date: Fri Jan 17 16:49:03 UTC 2020 New revision: 523339 URL: https://svnweb.freebsd.org/changeset/ports/523339 Log: biology/muscle: unbreak in -CURRENT Don't compile problematic (and unnecessary) file. PR: 243206 Submitted by: mzaki@e-mail.ne.jp (maintainer) Changes: head/biology/muscle/Makefile |
Created attachment 210555 [details] svn diff for biology/muscle to 3.8.1551 Update biology/muscle to 3.8.1551 This includes a bug fix for long sequences. Other changes on this port: *unbreak '/dev/tty' problem during a build *MAINTAINER mail address The port passed poudriere testport in my environment (11.3 amd64/i386).