Bug 247485
| Summary: | math/lapack (and math/atlas) do not build with gcc10 | ||||||||
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| Product: | Ports & Packages | Reporter: | gja822 | ||||||
| Component: | Individual Port(s) | Assignee: | Thierry Thomas <thierry> | ||||||
| Status: | Closed FIXED | ||||||||
| Severity: | Affects Only Me | CC: | alt2600, gja822, thierry | ||||||
| Priority: | --- | Flags: | koobs:
maintainer-feedback+
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| Version: | Latest | ||||||||
| Hardware: | Any | ||||||||
| OS: | Any | ||||||||
| See Also: | https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=257122 | ||||||||
| Bug Depends on: | 247542 | ||||||||
| Bug Blocks: | |||||||||
| Attachments: |
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Also I've noticed this during build of atlas:
/usr/local/bin/ranlib ../liblapack.a
make[4]: "/usr/ports/Mk/bsd.gcc.mk" line 101: Malformed conditional (${PORTNAME} == gcc)
make[4]: Fatal errors encountered -- cannot continue===> Cleaning for lapack-3.5.0_8
Is it O.K.?
math/blas and math/lapack are lagging: upstream released 3.9.0 and we have still 3.5. I'm working on these ports, and it should fix the problem with recent compilers, but no ETA yet: blacs, lapacke, etc. must be upgraded together, and some exp-runs will be required. However I'm not working on math/atlas: contributions are welcome. By the way net/mpich2 exhibits similar problem (not compiling with gcc10, only with gcc8) with FORTRAN argument mismatch error. Created attachment 222281 [details]
path-Makefile
Fixes build with GCC10(+?). gfortran10 has apparently went the way of strict type checking, which will cause problems with 30+ year old fortran libraries. I added -fallow-argument-mismatch to the F77FLAGS line in the do-build: loop to make gfortran10 handle mismatches like and older fortran compiler would and atlas built. I attempted other methods like adding to EXTRAFLAGS but this seemed to break the C build. I'm guessing ATLAS checking the compiler flags causes issue when gcc10 spits back that this is a fortran flag not a C flag.
Either way it builds now fine. not sure how lapack was fixed but it built fine during a system update to 12.2 I just completed. Given this has no maintainer, I might consider taking it over. Just need to play a little to see how hard it would be to get the newest support 3.10.3 version going a little bit, and what lapacks it expects to see to optimize against. Not sure how far things have gone with upgrading lapack, lapacke, etc to later versions. I know those are tough given how many things require them.
Created attachment 222282 [details]
Makefile
Complete Makefile for those that might want to try things without dealing with a patch.
Fixed when upgrading to 3.9.1: see PR 247542. ^Triage: - Track bug 247542 as the dependent of this issue (" - Fix the build with Gcc10") and correct resolution - Assign to committer that resolved |
math/lapack and math/atlas could be built with gcc7 or gcc8, but with gcc10 it stops with errors (although, 7 and 8 are considered outdated now?): gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fpic -c sgeqrt2.f -o sgeqrt2.o --- sorcsd2by1.o --- sorcsd2by1.f:389:40: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 389 | $ 0, V1T, LDV1T, 0, 1, U1, LDU1, U2, LDU2, 0, 0, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). sorcsd2by1.f:412:35: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 412 | $ THETA, 0, 0, 1, V1T, LDV1T, U2, LDU2, U1, LDU1, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). sorcsd2by1.f:436:55: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 436 | $ THETA, 0, U2, LDU2, U1, LDU1, 0, 1, V1T, LDV1T, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/REAL(4)). sorcsd2by1.f:473:23: 347 | CALL SORBDB1( M, P, Q, X11, LDX11, X21, LDX21, THETA, 0, 0, | 2 ...... 473 | $ WORK(IPHI), WORK(ITAUP1), WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:480:44: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 480 | CALL SORGQR( P, P, Q, U1, LDU1, WORK(ITAUP1), WORK(IORGQR), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:485:48: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 485 | CALL SORGQR( M-P, M-P, Q, U2, LDU2, WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:496:57: 362 | $ 0, WORK(1), -1, CHILDINFO ) | 2 ...... 496 | CALL SORGLQ( Q-1, Q-1, Q-1, V1T(2,2), LDV1T, WORK(ITAUQ1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:503:22: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 503 | $ WORK(IPHI), U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:528:23: 370 | CALL SORBDB2( M, P, Q, X11, LDX11, X21, LDX21, THETA, 0, 0, | 2 ...... 528 | $ WORK(IPHI), WORK(ITAUP1), WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:540:55: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 540 | CALL SORGQR( P-1, P-1, P-1, U1(2,2), LDU1, WORK(ITAUP1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:545:48: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 545 | CALL SORGQR( M-P, M-P, Q, U2, LDU2, WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:550:46: 362 | $ 0, WORK(1), -1, CHILDINFO ) | 2 ...... 550 | CALL SORGLQ( Q, Q, R, V1T, LDV1T, WORK(ITAUQ1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:557:22: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 557 | $ WORK(IPHI), V1T, LDV1T, 0, 1, U1, LDU1, U2, LDU2, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:582:23: 393 | CALL SORBDB3( M, P, Q, X11, LDX11, X21, LDX21, THETA, 0, 0, | 2 ...... 582 | $ WORK(IPHI), WORK(ITAUP1), WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:589:44: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 589 | CALL SORGQR( P, P, Q, U1, LDU1, WORK(ITAUP1), WORK(IORGQR), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:601:25: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 601 | $ WORK(ITAUP2), WORK(IORGQR), LORGQR, CHILDINFO ) | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:605:46: 362 | $ 0, WORK(1), -1, CHILDINFO ) | 2 ...... 605 | CALL SORGLQ( Q, Q, R, V1T, LDV1T, WORK(ITAUQ1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:612:29: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 612 | $ THETA, WORK(IPHI), 0, 1, V1T, LDV1T, U2, LDU2, U1, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:642:23: 417 | CALL SORBDB4( M, P, Q, X11, LDX11, X21, LDX21, THETA, 0, 0, | 2 ...... 642 | $ WORK(IPHI), WORK(ITAUP1), WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:655:46: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 655 | CALL SORGQR( P, P, M-Q, U1, LDU1, WORK(ITAUP1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:665:50: 351 | CALL SORGQR( P, P, Q, U1, LDU1, 0, WORK(1), -1, | 2 ...... 665 | CALL SORGQR( M-P, M-P, M-Q, U2, LDU2, WORK(ITAUP2), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:674:46: 362 | $ 0, WORK(1), -1, CHILDINFO ) | 2 ...... 674 | CALL SORGLQ( Q, Q, Q, V1T, LDV1T, WORK(ITAUQ1), | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). sorcsd2by1.f:681:29: 366 | $ 0, U1, LDU1, U2, LDU2, V1T, LDV1T, 0, 1, 0, 0, | 2 ...... 681 | $ THETA, WORK(IPHI), U2, LDU2, U1, LDU1, 0, 1, V1T, | 1 Error: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/INTEGER(4)). *** [sorcsd2by1.o] Error code 1 make[3]: stopped in /usr/ports/math/lapack/work/lapack-3.5.0_SHARED/SRC 1 error make[3]: stopped in /usr/ports/math/lapack/work/lapack-3.5.0_SHARED/SRC *** [lapacklib] Error code 2 make[2]: stopped in /usr/ports/math/lapack/work/lapack-3.5.0_SHARED 1 error make[2]: stopped in /usr/ports/math/lapack/work/lapack-3.5.0_SHARED *** Error code 2 Stop. make[1]: stopped in /usr/ports/math/lapack *** Error code 1