Bug 73391

Summary: [Maintainer update] update biology/biojava to 1.30
Product: Ports & Packages Reporter: Choe, Cheng-Dae <whitekid>
Component: Individual Port(s)Assignee: Volker Stolz <vs>
Status: Closed FIXED    
Severity: Affects Only Me    
Priority: Normal    
Version: Latest   
Hardware: Any   
OS: Any   
Attachments:
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Description Choe, Cheng-Dae 2004-11-01 19:50:21 UTC 
- Update biology/biojava to 1.30
- Update maintainer to me
- Build with apache-ant
- Install javadoc and example files 

But it has some todo.
If biojava compiled with jdk1.4, it produce demo-1.4 directory. but this pr don't consider this. When it ccompiled with jdk1.3 or below, just ignore demo-1.4.

How-To-Repeat:       N/A
Comment 1 Volker Stolz freebsd_committer freebsd_triage 2004-11-16 08:49:48 UTC 
State Changed
From-To: open->feedback

Does not build on 4.10: 

compile: 
[javac] Compiling 918 source files to /usr/ports/biology/biojava/work/biojava-1.30/ant-build/classes/main 
[javac] assertion "! array" failed: file "tuple.h", line 429 



BUILD FAILED 
/usr/ports/biology/biojava/work/biojava-1.30/build.xml:281: Compile failed; see the compiler error output for details. 

Total time: 9 seconds 
*** Error code 1 

Stop in /usr/ports/biology/biojava. 
biojava@menelaos [09:49:16]> make -V JAVA -V JAVAC 
/usr/local/diablo-jdk1.3.1/bin/java 
/usr/local/bin/jikes -bootclasspath /usr/local/diablo-jdk1.3.1/jre/lib/rt.jar
Comment 2 Volker Stolz freebsd_committer freebsd_triage 2004-11-16 08:49:48 UTC 
Responsible Changed
From-To: freebsd-ports-bugs->vs

I'll track this.
Comment 3 Volker Stolz freebsd_committer freebsd_triage 2004-11-22 15:48:07 UTC 
State Changed
From-To: feedback->closed

Committed with modificatiosn, thanks! 
- It's spelled JAVA_VERSION, not JDK_VERSION 
- No need to list ant in BUILD_DEPENDS when USE_ANT=YES