Bug 187975 - biology/seaview: Update to version 4.5.0
Summary: biology/seaview: Update to version 4.5.0
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Martin Wilke
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2014-03-26 18:40 UTC by tkato432
Modified: 2014-05-21 06:50 UTC (History)
0 users

See Also:


Attachments
file.diff (973 bytes, patch)
2014-03-26 18:40 UTC, tkato432
no flags Details | Diff
biology_seaview.diff (1.89 KB, patch)
2014-04-26 19:27 UTC, tkato432
no flags Details | Diff
biology_seaview.diff (1.89 KB, patch)
2014-04-29 19:38 UTC, tkato432
no flags Details | Diff
biology_seaview.diff (2.47 KB, patch)
2014-05-19 18:56 UTC, tkato432
no flags Details | Diff

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Description tkato432 2014-03-26 18:40:02 UTC
- Update to version 4.5.0
Comment 1 Edwin Groothuis freebsd_committer freebsd_triage 2014-03-26 18:40:21 UTC
Responsible Changed
From-To: freebsd-ports-bugs->miwi

miwi@ wants this submitter's PRs (via the GNATS Auto Assign Tool)
Comment 2 Martin Wilke freebsd_committer freebsd_triage 2014-04-26 04:10:20 UTC
State Changed
From-To: open->feedback

checksum mismatch.
Comment 3 tkato432 2014-04-26 19:27:40 UTC
Here is the corrected patch.
Comment 4 tkato432 2014-04-29 19:38:32 UTC
Version 4.5.1 has been released.
Comment 5 Martin Wilke freebsd_committer freebsd_triage 2014-05-18 08:24:34 UTC
State Changed
From-To: feedback->open

..
Comment 6 Martin Wilke freebsd_committer freebsd_triage 2014-05-18 08:24:54 UTC
State Changed
From-To: open->feedback

distfile mismatch 
http://pkgdev.miwibox.org/data/11i386-default/2014-05-18_06h52m06s/logs/errors/seaview-4.5.1,1.log
Comment 7 tkato432 2014-05-19 18:56:06 UTC
Here is the corrected patch.
Comment 8 dfilter service freebsd_committer freebsd_triage 2014-05-21 06:40:58 UTC
Author: miwi
Date: Wed May 21 05:40:53 2014
New Revision: 354710
URL: http://svnweb.freebsd.org/changeset/ports/354710
QAT: https://qat.redports.org/buildarchive/r354710/

Log:
  - Update to 4.5.1
  
  PR:		187975
  Submitted by:	Ports Fury

Modified:
  head/biology/seaview/Makefile
  head/biology/seaview/distinfo
  head/biology/seaview/pkg-descr

Modified: head/biology/seaview/Makefile
==============================================================================
--- head/biology/seaview/Makefile	Wed May 21 05:40:08 2014	(r354709)
+++ head/biology/seaview/Makefile	Wed May 21 05:40:53 2014	(r354710)
@@ -2,10 +2,11 @@
 # $FreeBSD$
 
 PORTNAME=	seaview
-PORTVERSION=	4.4.3
+PORTVERSION=	4.5.1
 PORTEPOCH=	1
 CATEGORIES=	biology
-MASTER_SITES=	http://pbil.univ-lyon1.fr/software/seaview_data/archive/
+MASTER_SITES=	http://doua.prabi.fr/software/seaview_data/ \
+		ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/
 DISTNAME=	${PORTNAME}_${PORTVERSION}
 
 MAINTAINER=	ports@FreeBSD.org
@@ -25,11 +26,12 @@ MAKE_ENV=	HELPFILE='-DDEFAULT_HELPFILE=\
 		OPT="${CFLAGS}"
 ALL_TARGET=	${PORTNAME}
 
-PLIST_FILES=	bin/seaview man/man1/seaview.1.gz %%DATADIR%%/seaview.html
+PLIST_FILES=	bin/seaview man/man1/seaview.1.gz %%DATADIR%%/seaview.html \
+		share/pixmaps/seaview.xpm
 PLIST_DIRS=	%%DATADIR%%
 
-DESKTOP_ENTRIES="SeaView" "${COMMENT}" "" \
-		"${PORTNAME}" "Biology;Science;" "true"
+DESKTOP_ENTRIES="SeaView" "" "${PREFIX}/share/pixmaps/seaview.xpm" "seaview" \
+		"Biology;Science;" "true"
 
 OPTIONS_DEFINE=		PDFLIB
 OPTIONS_DEFAULT=	PDFLIB
@@ -43,6 +45,7 @@ post-patch:
 		's|^\(PDF_PS_FLAGS\) |#\1 | ; \
 		 s|^\(FLTK\) |#\1 | ; \
 		 s|^\(USE_XFT\) |#\1 | ; \
+		 s| -ldl|| ; \
 		 s|^\(CC\) |#\1 | ; \
 		 s|^\(CXX\) |#\1 | ; \
 		 s|^\(OPT\) |#\1 | ; \
@@ -56,5 +59,7 @@ do-install:
 	@${MKDIR} ${STAGEDIR}${DATADIR}
 	(cd ${WRKSRC} && ${INSTALL_DATA} seaview.html \
 		${STAGEDIR}${DATADIR})
+	(cd ${WRKSRC} && ${INSTALL_DATA} seaview.xpm \
+		${STAGEDIR}${PREFIX}/share/pixmaps)
 
 .include <bsd.port.mk>

Modified: head/biology/seaview/distinfo
==============================================================================
--- head/biology/seaview/distinfo	Wed May 21 05:40:08 2014	(r354709)
+++ head/biology/seaview/distinfo	Wed May 21 05:40:53 2014	(r354710)
@@ -1,2 +1,2 @@
-SHA256 (seaview_4.4.3.tar.gz) = cf547cd5d81b85da3bf5c9446c514250d2253714ad66cabbeaa320f416e79d43
-SIZE (seaview_4.4.3.tar.gz) = 325513
+SHA256 (seaview_4.5.1.tar.gz) = f02c0be6110ad475258a95e315ed62e478bc3785a4d3341364691b128cefeee3
+SIZE (seaview_4.5.1.tar.gz) = 340762

Modified: head/biology/seaview/pkg-descr
==============================================================================
--- head/biology/seaview/pkg-descr	Wed May 21 05:40:08 2014	(r354709)
+++ head/biology/seaview/pkg-descr	Wed May 21 05:40:53 2014	(r354710)
@@ -10,4 +10,4 @@ Example mase files can be found at:
 
 	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
 
-WWW: http://pbil.univ-lyon1.fr/software/seaview.html
+WWW: http://doua.prabi.fr/software/seaview
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Comment 9 Martin Wilke freebsd_committer freebsd_triage 2014-05-21 06:40:59 UTC
State Changed
From-To: feedback->closed

Committed. Thanks!