Bug 201363 - [MAINTAINER] math/py-pandas: Update to 0.16.2
Summary: [MAINTAINER] math/py-pandas: Update to 0.16.2
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Some People
Assignee: Bartek Rutkowski
URL:
Keywords: easy, patch, patch-ready
Depends on:
Blocks:
 
Reported: 2015-07-05 17:21 UTC by John W. O'Brien
Modified: 2015-07-07 09:38 UTC (History)
3 users (show)

See Also:
john: maintainer-feedback+

Attachments
Update math/py-pandas to 0.16.2 (854 bytes, patch)
2015-07-05 17:21 UTC, John W. O'Brien 		no flags Details | Diff
poudriere testport log for py27-pandas-0.16.2 (429.68 KB, text/plain)
2015-07-05 17:23 UTC, John W. O'Brien 		no flags Details
poudriere testport log for py34-pandas-0.16.2 (435.07 KB, text/plain)
2015-07-05 17:23 UTC, John W. O'Brien 		no flags Details
Nosetests output (w/python2.7 and all options enabled) (732.35 KB, text/plain)
2015-07-05 17:23 UTC, John W. O'Brien 		no flags Details
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Description John W. O'Brien 2015-07-05 17:21:55 UTC 
Created attachment 158383 [details]
Update math/py-pandas to 0.16.2

Changelog
=========

*   Update to 0.16.2

QA
==

*   poudriere

    See attached testport logs.

*   portlint

    % portlint -AC math/py-pandas
    WARN: Makefile: for new port, make $FreeBSD$ tag in comment section empty, to make SVN happy.
    0 fatal errors and 1 warning found.

*   nosetests

    Ran 8481 tests in 1164.110s

    FAILED (SKIP=229, errors=56)

ERROR: test_pytables_native_read (pandas.io.tests.test_pytables.TestHDFStore)

This is an error in devel/py-tables.

ERROR: test_to_hdf_with_object_column_names (pandas.io.tests.test_pytables.TestHDFStore)

This is a new test in 0.16.2 (see https://github.com/pydata/pandas/issues/9057). There appears to be a latent defect, either in the test itself, or in the bug fix it aims to cover, because when I run the test in isolation I get a batch of NaturalNameWarning but it passes, and when I run the entire TestHDFStore fixture in isolation, there are no warnings and only test_pytables_native_read fails. I will investigate further, and send my findings upstream if appropriate, but this does not appear to be a problem with this port.

All other errors are traceable to a backwards-incompatible API change as of textproc/py-openpyxl 2.2.0, which I have reported upstream (https://github.com/pydata/pandas/issues/9747). Others have noted it too (https://github.com/pydata/pandas/issues/10125). This port already advertizes the OPENPYXL2 option as "EXPERIMENTAL" per upstream documentation.
Comment 1 John W. O'Brien 2015-07-05 17:23:00 UTC 
Created attachment 158384 [details]
poudriere testport log for py27-pandas-0.16.2
Comment 2 John W. O'Brien 2015-07-05 17:23:17 UTC 
Created attachment 158385 [details]
poudriere testport log for py34-pandas-0.16.2
Comment 3 John W. O'Brien 2015-07-05 17:23:46 UTC 
Created attachment 158386 [details]
Nosetests output (w/python2.7 and all options enabled)
Comment 4 commit-hook freebsd_committer freebsd_triage 2015-07-07 09:37:02 UTC 
A commit references this bug:

Author: robak
Date: Tue Jul  7 09:36:03 UTC 2015
New revision: 391497
URL: https://svnweb.freebsd.org/changeset/ports/391497

Log:
  math/py-pandas: update 0.16.1 -> 0.16.2

  PR:		201363
  Submitted by:	John W. O'Brien <john@saltant.com> (maintainer)

Changes:
  head/math/py-pandas/Makefile
  head/math/py-pandas/distinfo
Comment 5 Bartek Rutkowski freebsd_committer freebsd_triage 2015-07-07 09:38:00 UTC 
Committed, thanks for your work!