Bug 209535 - [MAINTAINER UPDATE]: biology/paml: upgrade to version 4.9a
Summary: [MAINTAINER UPDATE]: biology/paml: upgrade to version 4.9a
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: --- Affects Only Me
Assignee: Dmitry Marakasov
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-05-16 02:50 UTC by Joseph Mingrone
Modified: 2016-05-16 16:11 UTC (History)
0 users

See Also:


Attachments
svn patch to upgrade paml to version 4.9a (1.02 KB, patch)
2016-05-16 02:50 UTC, Joseph Mingrone
no flags Details | Diff

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Description Joseph Mingrone freebsd_committer 2016-05-16 02:50:49 UTC
Created attachment 170338 [details]
svn patch to upgrade paml to version 4.9a

portlint: OK [1]

testport: OK (poudriere: 9.3-RELEASE-p36,  i386)  [2]
testport: OK (poudriere: 9.3-RELEASE-p30,  amd64) [3]
testport: OK (poudriere: 10.1-RELEASE-p17, i386)  [4]
testport: OK (poudriere: 10.1-RELEASE-p17, amd64) [5]

[1] WARN: Makefile: Consider defining LICENSE.
I don't see any license define for PAML.  In Readme.txt in the top level of the source code, it says "PAML is distributed free of charge for academic use only."

[2] http://pkg.awarnach.mathstat.dal.ca/data/9i386-default/2016-05-15_23h36m09s/logs/paml-4.9a.log

[3] http://pkg.awarnach.mathstat.dal.ca/data/9amd64-default/2016-05-15_23h36m21s/logs/paml-4.9a.log

[4] http://pkg.awarnach.mathstat.dal.ca/data/10i386-default/2016-05-15_23h36m31s/logs/paml-4.9a.log

[5] http://pkg.awarnach.mathstat.dal.ca/data/10amd64-default/2016-05-15_23h42m43s/logs/paml-4.9a.log
Comment 1 commit-hook freebsd_committer 2016-05-16 16:11:26 UTC
A commit references this bug:

Author: amdmi3
Date: Mon May 16 16:10:36 UTC 2016
New revision: 415338
URL: https://svnweb.freebsd.org/changeset/ports/415338

Log:
  - Update to 4.9a
  - While here, simplify WRKSRC and use options helpers

  PR:		209535
  Submitted by:	jrm@ftfl.ca (maintainer)

Changes:
  head/biology/paml/Makefile
  head/biology/paml/distinfo