Bug 227272 - [CHANGE REQUEST] biology/bedtools: Upgrade to 2.27.1
Summary: [CHANGE REQUEST] biology/bedtools: Upgrade to 2.27.1
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: --- Affects Only Me
Assignee: Jason W. Bacon
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-04-03 21:09 UTC by Jason W. Bacon
Modified: 2018-04-19 16:46 UTC (History)
1 user (show)

See Also:
bugzilla: maintainer-feedback? (scottcheloha)


Attachments
Unified diff (6.07 KB, patch)
2018-04-03 21:09 UTC, Jason W. Bacon
no flags Details | Diff
Unified diff (6.35 KB, patch)
2018-04-19 15:48 UTC, Jason W. Bacon
no flags Details | Diff

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Description Jason W. Bacon freebsd_committer 2018-04-03 21:09:48 UTC
Created attachment 192188 [details]
Unified diff

Upcoming biology/ddocent requires bedtools >= 2.26.0.

Changes here are pretty minimal.
Comment 1 scottcheloha 2018-04-19 02:43:02 UTC
I want to cede maintainership to Jason Bacon. I grant him permission to apply this patch and to assume maintainership of the port.
Comment 2 Jason W. Bacon freebsd_committer 2018-04-19 15:48:08 UTC
Created attachment 192656 [details]
Unified diff

Unsilence build commands.
Comment 3 commit-hook freebsd_committer 2018-04-19 16:45:09 UTC
A commit references this bug:

Author: jwb
Date: Thu Apr 19 16:44:59 UTC 2018
New revision: 467783
URL: https://svnweb.freebsd.org/changeset/ports/467783

Log:
  biology/bedtools: Upgrade to 2.27.1

  PR:             227272
  Submitted by:   jwb
  Approved by:    jrm (mentor)
  Differential Revision:  https://reviews.freebsd.org/D15137

Changes:
  head/biology/bedtools/Makefile
  head/biology/bedtools/distinfo
  head/biology/bedtools/files/patch-Makefile
  head/biology/bedtools/files/patch-src_utils_FileRecordTools_Records_StrandQueue.h
  head/biology/bedtools/pkg-descr
  head/biology/bedtools/pkg-plist