Attachment #171764 for bug #207425





PORTNAME?=	R
PORTVERSION=	3.3.0
PORTREVISION=   1
CATEGORIES=	math lang
MASTER_SITES=	http://cran.r-project.org/%SUBDIR%/ \
		ftp://cran.r-project.org/pub/R/%SUBDIR%/ \

			SED="${LOCALBASE}/bin/gsed" \
			ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes

OPTIONS_DEFINE=		MISSING DOCS LTO OPENMP LONGDOUBLE


MISSING_DESC=		use libmissing rather than libquadmath
LTO_DESC=               Try to produce faster code through LTO
LONGDOUBLE_DESC=	Enable use of long double data type
LTO_CONFIGURE_ENABLE=   lto
OPENMP_CONFIGURE_ENABLE= openmp
LONGDOUBLE_CONFIGURE_ENABLE= long-double

OPTIONS_SINGLE=         BLAS
OPTIONS_SINGLE_BLAS= 	RBLAS ATLAS OPENBLAS NETLIB
OPTIONS_DEFAULT=     	OPENBLAS

RBLAS_DESC=          	Use internal blas implementation

OPENBLAS_USES=  	blaslapack:openblas
NETLIB_USES=    	blaslapack:netlib
ATLAS_USES=     	blaslapack:atlas
RBLAS_CONFIGURE_ON= 	--without-blas --without-lapack
RBLAS_CONFIGURE_OFF= 	--with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
                        --with-lapack="${LAPACKLIB}"

OPTIONS_SUB=            RBLAS

.if defined(LIBRMATH_SLAVEPORT)
BUILD_WRKSRC=		${WRKSRC}/src/nmath/standalone

CPPFLAGS+=		-I${LOCALBASE}/include
LDFLAGS+=		-L${LOCALBASE}/lib

OPTIONS_DEFINE+=	ICU PCRE_PORT THREADS

ATLAS_DESC=		Use ATLAS instead of BLAS/LAPACK
ICU_DESC=		Use ICU for collation in multibyte locales
PCRE_PORT_DESC=		Use devel/pcre instead of the bundled PCRE


TCLTK_DESC=		tcltk package
X11_DESC=		X11() graphics device

OPTIONS_DEFAULT+=       GHOSTSCRIPT INFO_MANUALS JPEG LTO OPENMP \
			PANGOCAIRO PNG TCLTK TIFF X11

OPTIONS_DEFAULT_armv6+=		MISSING
OPTIONS_DEFAULT_powerpc+=	MISSING

.endif

.if !defined(LIBRMATH_SLAVEPORT)
.if ${PORT_OPTIONS:MATLAS}
LIB_DEPENDS+=		libatlas.so:math/atlas
BLAS?=			${LIBM} -lf77blas
LAPACK?=		${LIBM} -lalapack -lcblas
.else
BLAS?=			no
LAPACK?=		no
.endif
CONFIGURE_ARGS+=	--with-blas="${BLAS}" --with-lapack="${LAPACK}"
.if ${BLAS} == "no" || ${LAPACK} == "no"
PLIST_SUB+=		LAPACK=""
.else
PLIST_SUB+=		LAPACK="@comment "
.endif

.if ${PORT_OPTIONS:MICU}
LIB_DEPENDS+=		libicui18n.so:devel/icu


.if ${PORT_OPTIONS:MPANGOCAIRO}
USES+=			pkgconfig
USE_GNOME+=		pango cairo
PLIST_SUB+=		PANGOCAIRO=""
.else
CONFIGURE_ARGS+=	--without-cairo


.if ${PORT_OPTIONS:MX11}
CONFIGURE_ARGS+=	--with-x
USE_XORG=		ice sm x11 xext xmu xscrnsaver xt
PLIST_SUB+=		X11=""
.else
CONFIGURE_ARGS+=	--without-x

.if !${PORT_OPTIONS:MMISSING}
.if ${OSVERSION} < 1000016
	@${REINPLACE_CMD} -e 's/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \
		${WRKSRC}/src/nmath/pnchisq.c\
		${WRKSRC}/src/nmath/pgamma.c
	@${REINPLACE_CMD} -e 's/# define LOG logl/# define LOG(x) (long double)logq((__float128)(x))/' \
		${WRKSRC}/src/nmath/pnchisq.c\
		${WRKSRC}/src/nmath/pgamma.c

.endif
.if ${OSVERSION} < 1000034
	@${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/' \


post-install:
.for L in R Rblas Rlapack
	@if [ -d ${STAGEDIR}${PREFIX}/lib/R/lib ] ; then \
	cd ${STAGEDIR}${PREFIX}/lib/R/lib; if [ -f lib${L}.so ] ; then \
	${LN} -sf lib${L}.so lib${L}.so.${${L:tu}_SOVERSION} ; fi; fi
.endfor
.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
	@(cd ${WRKSRC}/doc/manual; \

Lines 99-108 Link Here

(-)math/R/pkg-plist (-4 / +4 lines)
99	lib/R/include/Rmath.h	99	lib/R/include/Rmath.h
100	lib/R/include/Rversion.h	100	lib/R/include/Rversion.h
101	lib/R/include/S.h	101	lib/R/include/S.h
102	%%LAPACK%%lib/R/lib/libRblas.so	102	%%RBLAS%%lib/R/lib/libRblas.so
103	%%LAPACK%%lib/R/lib/libRblas.so.%%RBLAS_SOVERSION%%	103	%%RBLAS%%lib/R/lib/libRblas.so.%%RBLAS_SOVERSION%%
104	%%LAPACK%%lib/R/lib/libRlapack.so	104	%%RBLAS%%lib/R/lib/libRlapack.so
105	%%LAPACK%%lib/R/lib/libRlapack.so.%%RLAPACK_SOVERSION%%	105	%%RBLAS%%lib/R/lib/libRlapack.so.%%RLAPACK_SOVERSION%%
106	%%LIBR%%lib/R/lib/libR.so	106	%%LIBR%%lib/R/lib/libR.so
107	%%LIBR%%lib/R/lib/libR.so.%%R_SOVERSION%%	107	%%LIBR%%lib/R/lib/libR.so.%%R_SOVERSION%%
108	lib/R/library/KernSmooth/DESCRIPTION	108	lib/R/library/KernSmooth/DESCRIPTION

Return to bug 207425

Lines 3-8 Link Here

(-)math/R/Makefile (-24 / +37 lines)
3		3
4	PORTNAME?= R	4	PORTNAME?= R
5	PORTVERSION= 3.3.0	5	PORTVERSION= 3.3.0
		6	PORTREVISION= 1
6	CATEGORIES= math lang	7	CATEGORIES= math lang
7	MASTER_SITES= http://cran.r-project.org/%SUBDIR%/ \	8	MASTER_SITES= http://cran.r-project.org/%SUBDIR%/ \
8	ftp://cran.r-project.org/pub/R/%SUBDIR%/ \	9	ftp://cran.r-project.org/pub/R/%SUBDIR%/ \
Lines 34-42 Link Here
34	SED="${LOCALBASE}/bin/gsed" \	35	SED="${LOCALBASE}/bin/gsed" \
35	ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes	36	ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes
36		37
37	OPTIONS_DEFINE= MISSING DOCS	38	OPTIONS_DEFINE= MISSING DOCS LTO OPENMP LONGDOUBLE
		39
38		40
39	MISSING_DESC= use libmissing rather than libquadmath	41	MISSING_DESC= use libmissing rather than libquadmath
		42	LTO_DESC= Try to produce faster code through LTO
		43	LONGDOUBLE_DESC= Enable use of long double data type
		44	LTO_CONFIGURE_ENABLE= lto
		45	OPENMP_CONFIGURE_ENABLE= openmp
		46	LONGDOUBLE_CONFIGURE_ENABLE= long-double
		47
		48	OPTIONS_SINGLE= BLAS
		49	OPTIONS_SINGLE_BLAS= RBLAS ATLAS OPENBLAS NETLIB
		50	OPTIONS_DEFAULT= OPENBLAS
		51
		52	RBLAS_DESC= Use internal blas implementation
		53
		54	OPENBLAS_USES= blaslapack:openblas
		55	NETLIB_USES= blaslapack:netlib
		56	ATLAS_USES= blaslapack:atlas
		57	RBLAS_CONFIGURE_ON= --without-blas --without-lapack
		58	RBLAS_CONFIGURE_OFF= --with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
		59	--with-lapack="${LAPACKLIB}"
		60
		61	OPTIONS_SUB= RBLAS
40		62
41	.if defined(LIBRMATH_SLAVEPORT)	63	.if defined(LIBRMATH_SLAVEPORT)
42	BUILD_WRKSRC= ${WRKSRC}/src/nmath/standalone	64	BUILD_WRKSRC= ${WRKSRC}/src/nmath/standalone
Lines 57-65 Link Here
57	CPPFLAGS+= -I${LOCALBASE}/include	79	CPPFLAGS+= -I${LOCALBASE}/include
58	LDFLAGS+= -L${LOCALBASE}/lib	80	LDFLAGS+= -L${LOCALBASE}/lib
59		81
60	OPTIONS_DEFINE+= ATLAS ICU PCRE_PORT THREADS	82	OPTIONS_DEFINE+= ICU PCRE_PORT THREADS
61		83
62	ATLAS_DESC= Use ATLAS instead of BLAS/LAPACK
63	ICU_DESC= Use ICU for collation in multibyte locales	84	ICU_DESC= Use ICU for collation in multibyte locales
64	PCRE_PORT_DESC= Use devel/pcre instead of the bundled PCRE	85	PCRE_PORT_DESC= Use devel/pcre instead of the bundled PCRE
65		86
Lines 85-92 Link Here
85	TCLTK_DESC= tcltk package	106	TCLTK_DESC= tcltk package
86	X11_DESC= X11() graphics device	107	X11_DESC= X11() graphics device
87		108
88	OPTIONS_DEFAULT+= GHOSTSCRIPT INFO_MANUALS JPEG LIBR PANGOCAIRO PNG \	109	OPTIONS_DEFAULT+= GHOSTSCRIPT INFO_MANUALS JPEG LTO OPENMP \
89	TCLTK TIFF X11	110	PANGOCAIRO PNG TCLTK TIFF X11
90		111
91	OPTIONS_DEFAULT_armv6+= MISSING	112	OPTIONS_DEFAULT_armv6+= MISSING
92	OPTIONS_DEFAULT_powerpc+= MISSING	113	OPTIONS_DEFAULT_powerpc+= MISSING
Lines 144-163 Link Here
144	.endif	165	.endif
145		166
146	.if !defined(LIBRMATH_SLAVEPORT)	167	.if !defined(LIBRMATH_SLAVEPORT)
147	.if ${PORT_OPTIONS:MATLAS}
148	LIB_DEPENDS+= libatlas.so:math/atlas
149	BLAS?= ${LIBM} -lf77blas
150	LAPACK?= ${LIBM} -lalapack -lcblas
151	.else
152	BLAS?= no
153	LAPACK?= no
154	.endif
155	CONFIGURE_ARGS+= --with-blas="${BLAS}" --with-lapack="${LAPACK}"
156	.if ${BLAS} == "no" \|\| ${LAPACK} == "no"
157	PLIST_SUB+= LAPACK=""
158	.else
159	PLIST_SUB+= LAPACK="@comment "
160	.endif
161		168
162	.if ${PORT_OPTIONS:MICU}	169	.if ${PORT_OPTIONS:MICU}
163	LIB_DEPENDS+= libicui18n.so:devel/icu	170	LIB_DEPENDS+= libicui18n.so:devel/icu
Lines 218-224 Link Here
218		225
219	.if ${PORT_OPTIONS:MPANGOCAIRO}	226	.if ${PORT_OPTIONS:MPANGOCAIRO}
220	USES+= pkgconfig	227	USES+= pkgconfig
221	USE_GNOME+= pango	228	USE_GNOME+= pango cairo
222	PLIST_SUB+= PANGOCAIRO=""	229	PLIST_SUB+= PANGOCAIRO=""
223	.else	230	.else
224	CONFIGURE_ARGS+= --without-cairo	231	CONFIGURE_ARGS+= --without-cairo
Lines 252-258 Link Here
252		259
253	.if ${PORT_OPTIONS:MX11}	260	.if ${PORT_OPTIONS:MX11}
254	CONFIGURE_ARGS+= --with-x	261	CONFIGURE_ARGS+= --with-x
255	USE_XORG= x11 xmu xt	262	USE_XORG= ice sm x11 xext xmu xscrnsaver xt
256	PLIST_SUB+= X11=""	263	PLIST_SUB+= X11=""
257	.else	264	.else
258	CONFIGURE_ARGS+= --without-x	265	CONFIGURE_ARGS+= --without-x
Lines 290-296 Link Here
290	.if !${PORT_OPTIONS:MMISSING}	297	.if !${PORT_OPTIONS:MMISSING}
291	.if ${OSVERSION} < 1000016	298	.if ${OSVERSION} < 1000016
292	@${REINPLACE_CMD} -e 's/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \	299	@${REINPLACE_CMD} -e 's/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \
293	${WRKSRC}/src/nmath/pnchisq.c	300	${WRKSRC}/src/nmath/pnchisq.c\
		301	${WRKSRC}/src/nmath/pgamma.c
		302	@${REINPLACE_CMD} -e 's/# define LOG logl/# define LOG(x) (long double)logq((__float128)(x))/' \
		303	${WRKSRC}/src/nmath/pnchisq.c\
		304	${WRKSRC}/src/nmath/pgamma.c
		305
294	.endif	306	.endif
295	.if ${OSVERSION} < 1000034	307	.if ${OSVERSION} < 1000034
296	@${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/' \	308	@${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/' \
Lines 369-376 Link Here
369		381
370	post-install:	382	post-install:
371	.for L in R Rblas Rlapack	383	.for L in R Rblas Rlapack
372	@(cd ${STAGEDIR}${PREFIX}/lib/R/lib; if [ -f lib${L}.so ] ; then \	384	@if [ -d ${STAGEDIR}${PREFIX}/lib/R/lib ] ; then \
373	${LN} -sf lib${L}.so lib${L}.so.${${L:tu}_SOVERSION} ; fi)	385	cd ${STAGEDIR}${PREFIX}/lib/R/lib; if [ -f lib${L}.so ] ; then \
		386	${LN} -sf lib${L}.so lib${L}.so.${${L:tu}_SOVERSION} ; fi; fi
374	.endfor	387	.endfor
375	.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}	388	.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
376	@(cd ${WRKSRC}/doc/manual; \	389	@(cd ${WRKSRC}/doc/manual; \